Genomic Resources - Ricebean Portal

Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

Search Results

SNPs for the gene Vu_12199 on Chromosome LG3(13957262-13958875)

snp-id

alleles

chrom

pos

GP-100

GP-101

GP-102

GP-103

GP-106

GP-11

GP-110

GP-111

GP-112

GP-113

GP-114

GP-115

GP-116

GP-117

GP-118

GP-119

GP-120

GP-121

GP-122

GP-123

GP-124

GP-125

GP-126

GP-127

GP-128

GP-129

GP-130

GP-131

GP-132

GP-133

GP-134

GP-135

GP-136

GP-137

GP-138

GP-139

GP-140

GP-141

GP-142

GP-143

GP-144

GP-145

GP-146

GP-147

GP-148

GP-149

GP-150

GP-151

GP-152

GP-153

GP-154

GP-155

GP-156

GP-157

GP-158

GP-159

GP-160

GP-161

GP-162

GP-163

GP-164

GP-165

GP-166

GP-167

GP-168

GP-169

GP-170

GP-171

GP-173

GP-174

GP-175

GP-176

GP-177

GP-178

GP-179

GP-18

GP-180

GP-181

GP-182

GP-183

GP-184

GP-185

GP-186

GP-187

GP-188

GP-189

GP-19

GP-190

GP-191

GP-192

GP-193

GP-194

GP-195

GP-196

GP-197

GP-198

GP-199

GP-2

GP-20

GP-200

GP-201

GP-202

GP-203

GP-204

GP-205

GP-206

GP-207

GP-208

GP-209

GP-210

GP-211

GP-212

GP-213

GP-214

GP-215

GP-216

GP-217

GP-218

GP-219

GP-220

GP-221

GP-222

GP-223

GP-224

GP-225

GP-226

GP-227

GP-228

GP-229

GP-230

GP-231

GP-232

GP-233

GP-234

GP-235

GP-236

GP-237

GP-238

GP-239

GP-240

GP-241

GP-242

GP-243

GP-244

GP-245

GP-246

GP-247

GP-248

GP-249

GP-250

GP-251

GP-252

GP-253

GP-254

GP-255

GP-256

GP-257

GP-258

GP-259

GP-260

GP-261

GP-262

GP-263

GP-264

GP-265

GP-266

GP-267

GP-268

GP-269

GP-270

GP-271

GP-275

GP-278

GP-280

GP-281

GP-282

GP-283

GP-284

GP-285

GP-286

GP-287

GP-288

GP-289

GP-290

GP-291

GP-292

GP-293

GP-295

GP-296

GP-297

GP-3

GP-301

GP-302

GP-303

GP-304

GP-305

GP-306

GP-308

GP-311

GP-312

GP-318

GP-319

GP-320

GP-322

GP-323

GP-326

GP-327

GP-328

GP-329

GP-330

GP-331

GP-332

GP-334

GP-336

GP-337

GP-345

GP-346

GP-347

GP-348

GP-350

GP-351

GP-352

GP-36

GP-365

GP-366

GP-368

GP-38

GP-39

GP-40

GP-41

GP-45

GP-46

GP-47

GP-48

GP-49

GP-50

GP-51

GP-52

GP-54

GP-7

GP-77

GP-78

GP-79

GP-8

GP-81

GP-83

GP-84

GP-99

N-1

N-10

N-100

N-102

N-103

N-106

N-107

N-108

N-109

N-11

N-110

N-114

N-115

N-116

N-117

N-119

N-121

N-122

N-123

N-124

N-127

N-129

N-13

N-130

N-132

N-133

N-134

N-135

N-137

N-141

N-142

N-143

N-144

N-145

N-147

N-148

N-149

N-15

N-151

N-153

N-154

N-155

N-156

N-157

N-158

N-159

N-160

N-161

N-162

N-163

N-164

N-165

N-166

N-167

N-168

N-169

N-170

N-2

N-22

N-23

N-24

N-26

N-28

N-29

N-30

N-31

N-32

N-33

N-35

N-37

N-38

N-39

N-4

N-40

N-41

N-44

N-45

N-46

N-47

N-48

N-51

N-52

N-54

N-55

N-56

N-57

N-58

N-6

N-60

N-65

N-67

N-68

N-7

N-72

N-77

N-78

N-8

N-82

N-84

N-85

N-89

N-9

N-92

N-98

N-99

C/T

LG3

13957284

C

C

Y

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

N

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

N

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

Y

C

C

C

C

C

C

C

C

C

C

C

C

C

C

N

C

Y

Y

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

N

C

C

C

C

C

C

C

C

C

N

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

N

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

Y

C

C

C

C

C

C

C

C

C

C

C

C

N

C

N

N

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

N

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

N

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

G/C

LG3

13957384

G

G

N

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

N

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

N

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

N

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

N

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

S

G

G

G

G

G

G

G

G

G

G

G

G

N

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

N

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

N

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

A/C

LG3

13957538

A

A

A

A

A

A

A

A

A

A

A

C

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

N

A

A

A

A

A

M

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

M

A

A

A

A

A

A

N

A

A

A

A

A

M

A

C

C

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

N

A

A

A

A

A

A

A

A

A

A

A

A

A

M

A

A

N

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

A

N

A

A

A

A

A

A

N

A

N

C/T

LG3

13957690

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

T

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

N

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

N

C

C

N

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

N

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

N

C

C

C

C

C

C

C

C

C

N

C

N

C

N

C

C

C

N

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

N

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

N

C

C

C

C

N

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

N

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

N

C

C

C

C

C

C

C

C

C

C/T

LG3

13957775

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

N

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

N

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

T

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

N

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

N

C

C

C

N

C

C

C

C

C

C

C

C

C

C

C

N

C

C

C

N

C

C

C

N

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

N

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

N

C

N

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

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C

C

C

C

C

C

C

C

C

C

C

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C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

N

C

C

C

N

C

C

C

C

C

G/A

LG3

13957807

R

G

R

G

G

R

G

G

G

G

A

G

G

R

G

A

G

G

G

G

G

A

A

G

G

G

A

R

G

G

G

G

R

R

A

G

G

G

A

A

A

A

A

A

G

R

G

R

R

A

G

G

G

G

G

G

G

N

G

R

G

G

A

G

R

G

G

G

A

A

A

G

G

A

A

G

G

R

G

G

G

G

A

G

R

G

G

A

A

G

G

G

G

G

G

G

A

G

R

A

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

N

G

G

G

G

G

G

G

G

G

A

A

R

G

A

A

G

G

G

G

G

G

G

G

G

A

G

G

G

G

G

G

G

G

G

G

N

G

G

G

N

G

G

G

G

G

G

G

G

G

G

G

N

G

G

G

G

G

G

G

N

G

G

G

G

G

G

R

G

G

G

G

G

G

G

G

A

R

G

G

G

G

G

G

G

G

G

G

G

N

G

G

G

G

G

G

G

G

G

R

G

G

G

G

G

G

G

G

G

G

G

G

G

G

G

A

G

R

G

G

G

N

G

N

G

G

A

G

G

G

A

R

G

G

N

A

G

G

G

G

G

A

G

G

G

G

G

G

G

G

R

G

G

G

G

G

A

G

G

G

G

G

G

G

R

G

G

G

G

G

G

R

G

R

R

G

G

N

G

G

G

G

G

A

G

R

G

G

G

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N

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N

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C

A/G

LG3

13958096

A

A

A

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A

G/A

LG3

13958118

G

G

G

G

G

G

G

G

G

G

G

G

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N

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N

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N

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N

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G

G

G

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T/C

LG3

13958138

T

T

T

Y

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N

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T

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T

T

G/A

LG3

13958156

G

G

G

G

G

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G

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N

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N

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R

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N

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N

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G

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G

G

G/A

LG3

13958164

G

G

G

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R

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N

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N

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G

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G

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T/C

LG3

13958167

T

T

T

T

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C/T

LG3

13958171

C

C

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G/A

LG3

13958172

G

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R

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LG3

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G/T

LG3

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T/C

LG3

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LG3

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LG3

13958210

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A/G

LG3

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LG3

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T/C

LG3

13958251

T

T

Y

Y

T

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T/C/A

LG3

13958260

T

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C/A

LG3

13958274

C

C

C

C

C

C

C

C

C

C

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C

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N

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N

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C

A/G

LG3

13958278

A

A

R

R

A

A

A

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A/G

LG3

13958307

A

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G/A

LG3

13958309

G

G

G

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N

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C/T

LG3

13958315

C

C

C

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N

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G/A

LG3

13958318

G

G

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R

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N

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N

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N

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N

G

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T/C

LG3

13958331

T

T

N

N

T

T

T

T

T

T

T

T

T

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T

T

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T/G

LG3

13958335

T

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N

N

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C/G

LG3

13958343

C

C

C

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N

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G

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C/T

LG3

13958353

C

C

C

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N

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Y

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N

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N

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N

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N

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C

C

C

C

C

C

C

C/T

LG3

13958356

C

C

Y

Y

C

C

C

C

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N

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N

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N

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Y

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N

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N

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N

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C

C

C

G/A

LG3

13958390

G

G

G

R

G

G

G

G

G

N

G

G

G

G

G

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N

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G

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G

G

G/T

LG3

13958393

G

G

G

G

G

G

G

G

G

N

G

G

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N

N

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A/T/G

LG3

13958400

A

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T

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A/C

LG3

13958657

A

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T/A

LG3

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C/T

LG3

13958669

C

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G/A

LG3

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G

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C/G

LG3

13958695

C

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A/G

LG3

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A

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G/A

LG3

13958714

G

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A/G

LG3

13958717

A

A

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A

C/T

LG3

13958728

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

C

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N

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N

C

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N

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Y

T

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Y

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N

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N

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C

T/G

LG3

13958733

T

T

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N

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T

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C/T

LG3

13958740

C

C

C

C

C

C

C

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C

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N

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N

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Y

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C

C

C

C

C

C

C/T

LG3

13958748

C

C

C

C

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Y

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C

C

C

C

C

A/G

LG3

13958749

A

A

A

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G/A

LG3

13958755

G

G

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G/T

LG3

13958761

G

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G

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C/T

LG3

13958766

C

C

C

C

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N

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C/A

LG3

13958787

C

C

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C

C

G/A

LG3

13958789

G

G

G

G

G

G

G

G

G

G

G

G

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N

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N

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N

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N

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N

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G

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C/A

LG3

13958793

C

C

C

C

C

C

C

C

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C

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N

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N

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M

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C

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C

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C

C

C

C

C

C

C

A/T

LG3

13958799

A

A

A

A

A

A

A

A

A

A

A

A

A

A

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A

A

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A

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N

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N

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W

W

A

W

T

A

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W

A

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W

A

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A/G

LG3

13958801

A

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A

C/T

LG3

13958814

C

C

C

C

C

C

C

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C

C

C

C

C

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C

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N

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N

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Y

Y

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Y

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N

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C

C

C

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C

N

C

C

C

C

C

C

G/A

LG3

13958828

G

G

G

G

G

G

G

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G

G

G

G

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G

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G

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N

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N

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LG3

13958829

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LG3

13958832

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LG3

13958839

A

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LG3

13958847

G

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A/T

LG3

13958848

A

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LG3

13958852

C

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G/A

LG3

13958854

G

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A/G

LG3

13958855

A

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