Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_33343 LG9 39835512 39836083 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/G 39835534 stop_lost p.Ter164Glnext*?
A/G 39835618 missense_variant p.Ser136Pro
C/A 39835660 missense_variant p.Gly122Cys
C/T 39835663 missense_variant p.Gly121Arg
G/A 39835717 synonymous_variant p.Leu103Leu
A/G 39835723 stop_lost p.Ter101Argext*?
C/T 39835724 synonymous_variant p.Arg100Arg
G/A 39835728 missense_variant p.Ser99Leu
A/G 39835729 missense_variant p.Ser99Pro
G/A 39835744 stop_gained p.Gln94*
C/T 39835753 missense_variant p.Glu91Lys
T/A 39835761 splice_region_variant&intron_variant
C/T 39835774 intron_variant
T/C 39835785 intron_variant
C/G 39835786 intron_variant
C/G 39835806 intron_variant
C/A 39835817 splice_donor_variant&intron_variant
G/A,* 39835838 synonymous_variant p.Gly82Gly
C/A 39835839 missense_variant p.Gly82Val
C/A 39835840 missense_variant p.Gly82Cys
G/A 39835841 synonymous_variant p.Ser81Ser
G/A 39835875 missense_variant p.Ala70Val
C/T 39835888 missense_variant p.Asp66Asn
C/G 39835889 missense_variant p.Arg65Ser
G/A 39835894 missense_variant p.Arg64Trp
G/T 39835898 synonymous_variant p.Gly62Gly
G/A 39835901 synonymous_variant p.Asp61Asp
G/A 39835910 synonymous_variant p.Cys58Cys
G/A 39835922 synonymous_variant p.Leu54Leu
G/A 39835925 synonymous_variant p.Gly53Gly
C/T 39835958 synonymous_variant p.Leu42Leu
T/C 39835963 missense_variant p.Asn41Asp
G/A 39835984 missense_variant p.Arg34Trp
T/C 39835999 missense_variant p.Thr29Ala
T/C 39836028 missense_variant p.Glu19Gly
C/T 39836029 missense_variant p.Glu19Lys
C/T 39836048 missense_variant p.Met12Ile
T/C 39836053 missense_variant p.Thr11Ala
C/A 39836074 stop_gained p.Glu4*

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_33343.1
MRPEALVEKRTMVAGGVSEGDRLAVGGETRDGGRRLTMTTNLALEAHDDHISGLHARCESDGGRRDCGSAGGGEDSGEGSSGGDLGLTGIGGRAERTGVAVRTGGTGVSCRRNKRRQRENWRHRGVQKHRRREADIILMARRRGKDERGVREKILRERKIKAFLDFSDLT*


CDS Sequence:
>Vu_33343.1
ATGCGGCCGGAGGCGTTGGTGGAGAAACGCACGATGGTGGCCGGAGGCGTCAGCGAAGGCGACCGACTCGCCGTTGGTGGAGAAACGCGCGATGGTGGCCGGAGGCTCACGATGACCACAAATCTGGCATTGGAGGCTCACGATGACCACATATCTGGCCTCCATGCGCGCTGCGAGTCCGACGGCGGGCGGAGGGATTGCGGTTCGGCAGGTGGTGGTGAGGATTCCGGCGAGGGTTCTAGCGGCGGGGATTTGGGCTTGACAGGAATCGGAGGAAGAGCAGAGAGAACTGGAGTCGCGGTGAGAACTGGAGGCACCGGTGTCAGTTGTCGGAGGAATAAGCGACGGCAGCGAGAGAACTGGAGGCACCGTGGAGTCCAGAAGCACCGGCGGAGGGAGGCAGACATCATCTTGATGGCTCGACGGAGAGGCAAAGATGAGAGAGGCGTGCGAGAGAAAATCCTGCGAGAGAGAAAGATAAAAGCCTTTTTAGATTTTTCAGATTTAACCTAA


Promoter Sequence:
>Vu_33343::LG9:39836083-39838083(-)
ATGTCCTTCAATCTAAGGTTGATTGGAAGGGTGATTAGATGTAGGCATTGAGGCCGAACCAGGATAAAAACCTTGTGTTTGTTCTTCTTTCCCTATCTCTTTTACTTTGAATTGCATACGTGCTTTACTTACACTATAGGAGAGTTTCAAGATCATTCTAACTTTGCAAAAAGATTTCAAAAGCATTTGTTTTTAGTAATCACCAATTTACCCCACTCTTGGTGTTGAGAGACAAGGCTCTTTTTTTCTAACAATTGGCACCAGAGCTAGTTTTCAAAAGTTTCTTGAAAAACAAATTGATTACTCTTTCTGTATAATTGATTATCTGATCCTGATGGCCTCTGTTTCTTCAATATTGAGGAAGAGTGAATTTGAGTATGATTGTGTGCATGTTACTTGTAATGATAAATGCATTTTTGTTACTAACGATTTTTATGAGTCTTTTAAAACATGAATATTTCAAAAATCCTTCTAGGAGAGAAAAAATGGCATCAACATTCTGGAAACTAAAGAAAAGGAAGCAAATTTGCTGACAGAAAAATTCACCAGGTTCTTGAACATAAAGAAGATAAATACAAATGTCAAAGATGATCAGAAGATCAGCAAGGACCAAGGTTTGCAGGATAATGATCTTAGTGTGATGGCAAAGTCAAATGCAACCACAACTAGTTCACACAAGTTCACAAGTCTCTCTCATAAGACAAGCGGTCATGTCATTTATGGTGACAATAATAAGGGTAAAATCAATGGAATTGGTAAAATCCAAACACCCTCTTCTTATGTTATTGAGAGGGTGTTACTTGTTGAAGGGCTAAACCATAATCTATTTAGTATAAGTCCTCTATGATAAAAGGCTAAAAATAATCTTTGAACCTAATCATTGTCTTATAAGTAATGGTTTTACAAATAAACTTTTTCTAATTGGAAAGAGGTACAATAACATCTACATTATTGATTTTAGAAAAACCTGATTTAAATATGTCGTTTGCTTATTGTCTAAATAGGATTATATTATTAAACTTTATTATTGTAATAGTCATTTATTATAAAATTACAATTTGAGTATATATATATATATATATATATATATATTATAATATATATTGTTTTTAAATATCAATATGACTTATTAGCTTAGTTGGTTAGAGTGTCGTGCTGTATATTTGAAAATTTTAATATTTGATTGAAATAATATAGATTTTATATCAACTAAAATTGCGATTACAAAAAATTTTATTTTGTGTGACTTTATAAACTATCTTATAAGTAAAAATAGTATCAATTATATGATTAATTTTATTTTAAGAAATATTATTCAAAAAATTATAATGTCCTAACAATTAAATAATGACTATTAGATAGTACGTACGATTATATATGTATTTAATTATTTTTTTTACTGTATTCAAATGACTTTTAAAAGTAGAAAGTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATACTACTGCATTACGAGGATATGGTACCGGTTGGTTTTGTTTATACGCACCGGTTTTACAACCGAAGCATATTCAGACGAGGTAATAAGACATTGGTTTTATGCCTCGGTCATGAACCGAGTCAGAAAAAAATGGATTATGCCTCGGTTTTTAGGTAACCGAGGCGGTATCTTGTTTTTTTTTTAATTTATTCATTGTGAAATGATCTTCTAACGTTCCCAAAGCTAATAAACAGTCATCCCTTACGCATCATCTCTTCACTGTCAACCAACCAATAAACTTGTTTCAGTAAGAACAACAACACAGAAAGCATACAAATAACTCAAGGCTTCATTTTGGGGGTTCATAGCATAGTAAGAACTCAGCATTTCAGTAAGAACAACAACACACATATAAATGAAGTCAAACATAATATCACACACACACACACACAGAAGTTTCAAGAAGATTATAGGCCTTCGCCGCAGACACTGATTCGGAGGCCGTCGGGGGACCACTAAAGGTGGTCG


Gene Sequence:
>Vu_33343(-)
ATGCGGCCGGAGGCGTTGGTGGAGAAACGCACGATGGTGGCCGGAGGCGTCAGCGAAGGCGACCGACTCGCCGTTGGTGGAGAAACGCGCGATGGTGGCCGGAGGCTCACGATGACCACAAATCTGGCATTGGAGGCTCACGATGACCACATATCTGGCCTCCATGCGCGCTGCGAGTCCGACGGCGGGCGGAGGGATTGCGGTTCGGCAGGTGGTGGTGAGGATTCCGGCGAGGGTTCTAGCGGCGGGGATTTGGGCTTGACAGGGTAGGAAACTGGTTGGATGATGATGGGTTGGGAGGGTCTGGCGGGAGGGTTTGAGTAAGAATCGGAGGAAGAGCAGAGAGAACTGGAGTCGCGGTGAGAACTGGAGGCACCGGTGTCAGTTGTCGGAGGAATAAGCGACGGCAGCGAGAGAACTGGAGGCACCGTGGAGTCCAGAAGCACCGGCGGAGGGAGGCAGACATCATCTTGATGGCTCGACGGAGAGGCAAAGATGAGAGAGGCGTGCGAGAGAAAATCCTGCGAGAGAGAAAGATAAAAGCCTTTTTAGATTTTTCAGATTTAACCTAA