Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_09637 LG2 32219919 32220774 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 32219983 missense_variant p.Ala22Val
G/A 32220041 intron_variant
A/C 32220046 intron_variant
C/T 32220076 intron_variant
C/T 32220089 intron_variant
G/A 32220103 intron_variant
T/A 32220104 intron_variant
A/G 32220112 intron_variant
G/A 32220129 intron_variant
C/T 32220132 intron_variant
C/A 32220143 intron_variant
A/G 32220155 intron_variant
C/T 32220159 intron_variant
G/A 32220166 intron_variant
C/T 32220172 intron_variant
A/G 32220174 intron_variant
A/G 32220209 intron_variant
A/G 32220311 intron_variant
C/T 32220358 intron_variant
T/A 32220390 intron_variant
C/T 32220401 intron_variant
C/T 32220415 intron_variant
G/C 32220418 intron_variant
T/A 32220419 intron_variant
G/C,* 32220460 splice_acceptor_variant&intron_variant
C/T,* 32220490 synonymous_variant p.Leu36Leu
C/G 32220517 synonymous_variant p.Ser45Ser
C/A 32220531 missense_variant p.Ser50Tyr
T/A 32220636 intron_variant
T/A 32220639 intron_variant
T/G 32220646 intron_variant
C/T 32220653 intron_variant
G/T 32220711 synonymous_variant p.Gly79Gly
C/T 32220727 missense_variant p.Arg85Trp
G/A 32220739 missense_variant p.Ala89Thr
G/T 32220741 synonymous_variant p.Ala89Ala
C/A,T 32220756 stop_gained p.Cys94*
C/A 32220761 stop_gained p.Ser96*
G/A 32220762 synonymous_variant p.Ser96Ser
G/A 32220765 synonymous_variant p.Ser97Ser
G/A 32220771 synonymous_variant p.Arg99Arg
T/C 32220772 stop_lost&splice_region_variant p.Ter100Glnext*?

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_09637.1
MVSGFNGGLKSICDGCLKLIVAQFKLSSKNTPRTLLRACGFLDSSDTPPSAASETASTASSSKSPKCDQIGGDCVWIGGEIVVRRIFPANSRSCCSSER*


CDS Sequence:
>Vu_09637.1
ATGGTGTCTGGGTTCAATGGTGGTTTGAAGTCAATCTGTGATGGCTGTTTGAAGCTGATAGTGGCGCAATTCAAGCTCTCCTCCAAGAACACTCCGAGAACACTCCTCCGTGCTTGTGGTTTTCTCGACTCCTCCGACACTCCTCCCTCCGCTGCTTCTGAGACTGCCTCCACTGCCTCTTCGTCGAAATCTCCAAAGTGTGACCAAATTGGTGGGGATTGTGTTTGGATTGGTGGGGAAATTGTTGTTCGTCGGATTTTCCCAGCGAATTCGAGAAGTTGCTGTTCGTCGGAACGGTAA


Promoter Sequence:
>Vu_09637::LG2:32217919-32219919(+)
AATTCAATTTGTTGTTGGGGGATGATGTAACCTTGTGAACTCTCATGTATTTGAATTGATTTTAATTATATATGCTCCTTTCATCAATTGTTAGGGATTTTCTCCTTTGTTCTATGTTTGTTATGTTTTGATCGTTCATGGCATGATTTAATGGTCTTCTTTGTTATTGGGAAATACCTAGAAACCACGATCTGGAGAATTTCTCCCAAGAGCAATATTGGCTAGGGATGGAGATAGGAGGATTTGTCTTCTTAAGCTTCTAATCGTAATGCAGAAGTAATTATTAGGGATGCAAGGGATAGTGGTCTAGTAATTAAGGATAGGCTTTCTTCGCCGAGGGATCGGGTTTTAAGCACTATAGAAAGTGACGTTAACAATTGAATGAAGAAGACGAATTTGTATATGCATGTGAGTAAACAAGGTGAAATCTAAACCCCAACAACATACTCATCTAATAATTTCAATATCATTCATTCACCTTTGTGTTTTTCTTCACTTGATCAAAAGTGCATTTATATTTACTTTCTTGTTTTTGCATTCAAAAACCCTAAATTGTTCTTCAAAGTCTTAATTAGTTAAGTAGTTACATGACTGTCTAGTGTCGTGAGTCTCTTGGGAAATGATACTTGGTCTTACCATTTTATATTACTTGATACGATTCGGTACACTTGTCGATATCTTAACAAAAACCTTATAAACAATACATTGACCTAACTTGGAGACAAAAGCAAAAATACTCTCCAATAGGAAGAGGACATGTGACCACTACCTATGGAGTATCCTCTTCATTCCTAGAGTGATATGTAGCCACTAATTATGAGAAAACCTCTGTAGTGAGTATAACACATGGCCACTCTCACGTGGGACGTCCTACACACCCTTGCCCACCAAGCTAGGTTAAAACATTGACATCTTGGTCAACACTAGCTAATGAACATCCACTTTGGGTCAACATTGGGTCTTGACCTTTTGATACACTATCGTTGACACTATCAAATTAATACTACTTTATAAGGAAACTTTAGTATGACCAAGTTAGTAATTAACAAACTAGATAGGGTTAAAGTAACCTTAAGTCATTTTCCAATGAATACGAAATTGCTTTTCAATACTCAACTCTTATGAAAGGCTATGAAAGGTTAGTAAAACATAATGGAATGTTAAAAGATAAAAGTAAAGATCTATCCTAATGAAATTGATATTGAAGATGAAGTAACAAATAAAAGACTATGAAATCATTATAACGAAATAGGCTAATTCCACATTTTTTCCAAAAAAAAAATTGTTATCCATATAGATTATTGTTCAATTGATTATTGTTTTAGAATTTCAAATTAATTAAAGTGCATTCTTAATTAATTTAAGGGCAATCTTACATTTAACCAAAGTAGATTCTCAATTAAAAGAAAGACTTTTCTAGATTATTCATAATAAATTTAACCAAAGTATATTCTTAATTAAATCTTATTATGTTTAATCATTTCTATTATGTTATCTCTTAACCAGTAAAAAAATAATTAATCAAAATACATTCTTGACTAATTATTGTTGAAGTTTTTACCATTAATCAAAATATATTCGCAATTGGTAGCAAAAACTCATTTAATCATATGAAAGTTCCTGACTTCAATCAAAGTACATCCTAAATCAAAATTAGAAACCCTTAGACTCATATGATTAATATGCATGTAGATTAAAACACCTTATGATATAAAAGTCATTACTTTTGACGTGATTAAGAGATAAAAGACATAGAAAAAATAACCCAAATCAATATTAAAAAAATCAAAAACATTATTTCAATCTAACATCAGAATCCATAATGAAATTACAATAGAATAACTCCAAAAGTTTAGTCCTCTATGAATAGAGTGAAATACACTATGAAAATAAAAGTGAGAGAAGTGATGAATGATTGTTTCCTGGAGCGTTAAGTTTCAGTGGTGGCTTCATAGATTAGAGTTTTCAATTTAGGGTTGCTTTATGGTTTTGCAGGTTCA


Gene Sequence:
>Vu_09637(+)
ATGGTGTCTGGGTTCAATGGTGGTTTGAAGTCAATCTGTGATGGCTGTTTGAAGCTGATAGTGGCGCAATTCAAGCTCGTTCCTGGTTTGGCTTCTTCACTAGTGGAAAAATATCTTTTTATGACTAACTATATTATGACGTACTAAAATTATCCATCATAATAGGTTGACCGGTGGCAAAGTTGTAATAAAAATAAGACATATTATAACGTACTTTTGTAAATCAGTTATAATATAAAACGCGGTGGCAAACCTATAAATAAGTTTAAGACATATTATAACGTAGTTTTATATATTAGTTATAATATGAATTGCGGTGGCAAACTTGTAAATAAATTCAAAGATGTATTATAACAGAGTTTTAAAAATGAGTTATAATATCTCTTGTTCTTAATGTATTATAACGGAGTTTTAGAAATCAGTTATAATATTTCTTCCTCTCTAATTTTTCACATTTCTCTCTCGCATCTCTAATTTCATAACGTTCCCTCTCACTCTCGTTCTTCTCTTCCGCTTCTCTAAACCCTTGCATTTTTCGGCAGTCCTCCAAGAACACTCCGAGAACACTCCTCCGTGCTTGTGGTTTTCTCGACTCCTCCGACACTCCTCCCTCCGCTGCTTCTGAGACTGCCTCCACTGCCTCTTCGTCGAAATCTCCAAAGTGTGACCAAGTAGGTTTTATGATTCATAGTTCACATTCTACTCTTTGTTTTTTCCTAATTTGTTATGTTTTTCTTCTATTAATTTCACTAATTTCTCCTAGATTGGTGGGGATTGTGTTTGGATTGGTGGGGAAATTGTTGTTCGTCGGATTTTCCCAGCGAATTCGAGAAGTTGCTGTTCGTCGGAACGGTAA