Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_00246 LG1 4743224 4745125 exocyst complex component EXO70B1-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/A 4743302 missense_variant p.Val27Ile
C/T 4743324 missense_variant p.Pro34Leu
T/C 4743329 synonymous_variant p.Leu36Leu
C/T 4743348 missense_variant p.Ala42Val
T/C 4743358 synonymous_variant p.Tyr45Tyr
C/A 4743361 synonymous_variant p.Ser46Ser
A/C 4743365 missense_variant p.Ile48Leu
A/G 4743368 missense_variant p.Ile49Val
G/C 4743386 missense_variant p.Asp55His
T/C 4743422 missense_variant p.Tyr67His
G/C 4743428 missense_variant p.Asp69His
G/A 4743437 missense_variant p.Val72Met
G/C 4743440 missense_variant p.Val73Leu
T/C 4743442 synonymous_variant p.Val73Val
G/A 4743450 missense_variant p.Gly76Asp
C/A 4743455 missense_variant p.His78Asn
A/C 4743456 missense_variant p.His78Pro
A/G 4743466 synonymous_variant p.Pro81Pro
T/C 4743474 missense_variant p.Ile84Thr
C/T 4743505 synonymous_variant p.Thr94Thr
G/A 4743507 missense_variant p.Arg95Gln
C/A 4743511 synonymous_variant p.Thr96Thr
T/C 4743516 missense_variant p.Met98Thr
G/T 4743522 missense_variant p.Ser100Ile
A/C 4743563 synonymous_variant p.Arg114Arg
G/A 4743576 missense_variant p.Arg118His
T/C 4743577 synonymous_variant p.Arg118Arg
A/G 4743578 missense_variant p.Ser119Gly
G/C 4743579 missense_variant p.Ser119Thr
C/G 4743587 missense_variant p.Leu122Val
T/A 4743588 missense_variant p.Leu122Gln
G/T 4743590 missense_variant p.Val123Leu
A/T,G 4743593 missense_variant p.Ile124Val
T/C 4743610 synonymous_variant p.Gly129Gly
T/G 4743614 missense_variant p.Ser131Ala
G/C 4743624 missense_variant p.Gly134Ala
C/A 4743631 synonymous_variant p.Pro136Pro
A/T 4743655 missense_variant p.Glu144Asp
T/C 4743745 synonymous_variant p.Ala174Ala
T/A 4743750 missense_variant p.Val176Asp
T/G,* 4743755 missense_variant p.Tyr178Asp
G/C 4743776 missense_variant p.Ala185Pro
C/G 4743872 missense_variant p.Arg217Gly
T/G 4743898 synonymous_variant p.Val225Val
T/G 4743910 missense_variant p.Cys229Trp
A/C 4743914 synonymous_variant p.Arg231Arg
T/G 4743938 missense_variant p.Trp239Gly
A/T 4743999 missense_variant p.Asn259Ile
A/C 4744050 missense_variant p.Asn276Thr
C/T 4744134 missense_variant p.Ala304Val
A/G 4744139 missense_variant p.Ser306Gly
C/A 4744150 missense_variant p.Asn309Lys
C/A 4744157 missense_variant p.Leu312Ile
T/G 4744158 missense_variant p.Leu312Arg
C/A 4744167 missense_variant p.Ala315Glu
T/C 4744217 missense_variant p.Phe332Leu
T/A 4744218 missense_variant p.Phe332Tyr
T/A 4744227 missense_variant p.Phe335Tyr
C/G 4744276 missense_variant p.Cys351Trp
T/C 4744301 missense_variant p.Ser360Pro
C/A 4744318 synonymous_variant p.Gly365Gly
G/T 4744424 missense_variant p.Ala401Ser
C/G 4744474 missense_variant p.Asp417Glu
A/C 4744483 synonymous_variant p.Ser420Ser
G/A 4744510 missense_variant p.Met429Ile
T/G 4744567 missense_variant p.Asp448Glu
C/G 4744636 synonymous_variant p.Ser471Ser
C/G 4744661 missense_variant p.Arg480Gly
C/A 4744688 synonymous_variant p.Arg489Arg
T/G 4744730 missense_variant p.Ser503Ala
C/A 4744748 missense_variant p.Leu509Ile
C/T 4744753 synonymous_variant p.His510His
G/C 4744764 missense_variant p.Arg514Thr
A/C,T 4744769 missense_variant p.Ile516Leu
G/A 4744830 missense_variant p.Arg536Lys
T/C 4744843 synonymous_variant p.Asn540Asn
T/C 4744912 synonymous_variant p.Asp563Asp
T/C 4744940 missense_variant p.Ser573Pro
G/A 4744970 missense_variant p.Val583Ile
T/A 4744998 stop_gained p.Leu592*
A/T 4745007 missense_variant p.Tyr595Phe
G/A 4745059 synonymous_variant p.Lys612Lys
G/A 4745067 missense_variant p.Arg615Lys

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_00246.1
MSLGLSRLSQLGFEVDLLYFFCGLLTVQLMKIKPWLVTVGGAFSYSLIILRSNLDPQPRSGYHGLQYQDHVVVEIGSHSQPQGISNSVTQVDSTRTIMASSQPHPVIDMVWPSRGTRRSASLVISPQEGGSGGGPPENIYGTEECFMGCIEALKKENGNVIRAISMHVDKYLKASVLYEEEISVAELHGDDNMVVDSLSSGMIIKLRESVEKMVSDRFEEECLHVYSNCRREFLKESLWALGLQDQELNGEDINKSEKNERLIKAMNIAARILFPNEKRLFNRVFSRSIPNGEFNFRELCTELATSLLNSALALATWSHFMRNTLQELIQEFESFTTLLNIVVLLIRQRLCIYEASENVSLIPGGGIHPITLEGMYYTYSVYRNREIRKLSQDLKEGKIPASVYIDKVRILLKSSLDDKSKNGNKLEVMYYIKSLHQSRENKLRLGLDEMISPVCNYKMIELVESSLEANSKNYKNPSLRYVFIMNNRRFIEVETKLNGLGLSFGDDWLHKNTRKIQENLELYLRSSWNKIVDLLRVDINQPESSVVAELMKDNLYWFNEHFDETCNIQSAWSVCDEELREQVIKSIENMLLPAYGSFLGTFEQLVGKHAYKYIRYGMFEVQDRLNKLFLLRE*


CDS Sequence:
>Vu_00246.1
ATGTCTCTAGGCTTGTCTAGGCTGAGTCAGTTAGGATTTGAGGTTGATCTCCTGTATTTTTTCTGTGGACTTCTGACCGTACAACTCATGAAAATAAAACCGTGGTTAGTCACTGTTGGAGGAGCTTTCAGTTATTCCCTCATCATTCTTCGTTCCAATTTGGATCCTCAACCAAGAAGTGGGTATCATGGACTTCAATACCAAGATCATGTAGTGGTTGAAATTGGTTCTCATTCACAACCACAAGGAATCAGTAATAGTGTTACTCAAGTGGATTCAACCCGAACCATTATGGCTAGTTCACAACCTCATCCTGTCATTGATATGGTCTGGCCTTCAAGAGGAACAAGGCGTAGTGCTTCTCTAGTAATTTCACCTCAAGAGGGTGGTTCTGGTGGTGGCCCTCCCGAAAACATTTATGGTACCGAGGAATGCTTCATGGGTTGTATAGAGGCTCTTAAGAAGGAGAATGGGAACGTTATCAGAGCAATTTCCATGCATGTAGACAAATACCTTAAAGCTAGTGTTCTTTATGAGGAGGAGATTTCAGTGGCAGAATTGCATGGCGACGACAACATGGTGGTGGATTCATTGTCGTCAGGAATGATCATCAAGCTTCGTGAAAGTGTAGAGAAGATGGTGTCAGATCGATTTGAGGAGGAATGCTTGCACGTTTACAGTAATTGTCGGAGGGAGTTTCTGAAAGAGAGCCTCTGGGCATTAGGGTTGCAGGATCAAGAGCTCAACGGGGAGGACATTAACAAGTCGGAGAAGAATGAGAGGCTGATAAAAGCTATGAATATAGCGGCGAGGATACTCTTTCCCAATGAAAAAAGACTCTTCAATCGTGTCTTTAGCCGCTCCATTCCCAATGGGGAGTTTAATTTCAGGGAACTTTGCACGGAATTGGCTACTAGTCTGCTGAACTCTGCCCTTGCCTTGGCAACTTGGAGCCATTTCATGCGCAACACATTGCAGGAGTTGATACAAGAGTTTGAATCATTTACAACACTCTTAAATATTGTAGTGCTCCTGATAAGGCAGAGATTGTGCATTTATGAAGCTTCGGAAAATGTATCACTCATTCCTGGTGGCGGGATTCATCCTATTACCCTTGAAGGGATGTACTATACTTATTCGGTTTACAGAAATAGGGAAATTAGGAAACTTAGCCAAGATTTAAAGGAGGGAAAGATTCCAGCATCTGTGTACATAGACAAAGTGAGAATTCTGTTAAAGAGTAGTTTGGACGATAAGTCAAAAAATGGTAATAAGCTTGAAGTGATGTACTACATTAAATCTCTACACCAAAGTAGGGAGAATAAACTTAGACTAGGTTTAGATGAAATGATTTCACCTGTGTGTAATTACAAGATGATAGAGCTTGTAGAGAGCAGTTTAGAAGCCAACTCCAAAAATTACAAAAACCCTTCTTTGCGTTATGTTTTCATCATGAACAACCGGCGATTCATTGAAGTAGAGACAAAACTGAATGGACTGGGACTTTCTTTTGGAGATGACTGGCTCCACAAAAACACAAGAAAGATCCAAGAAAACCTTGAGCTCTATCTAAGAAGCTCATGGAATAAGATTGTGGACCTTTTGAGGGTAGACATCAATCAACCAGAGTCTAGTGTTGTAGCCGAGTTGATGAAAGACAACCTTTATTGGTTCAACGAACACTTTGATGAGACATGCAACATTCAGTCTGCATGGTCTGTCTGTGATGAGGAGCTAAGGGAACAAGTAATAAAATCCATAGAAAACATGCTGTTGCCAGCTTATGGAAGTTTCCTTGGCACATTTGAGCAACTTGTTGGGAAGCATGCTTATAAGTACATTAGGTATGGAATGTTTGAGGTTCAAGATCGACTCAACAAATTGTTTCTTTTAAGGGAGTAG


Promoter Sequence:
>Vu_00246::LG1:4741224-4743224(+)
AGAACACCCAGGTGCATTGAATAAAGGGATACACTCCCTCTGGTAGATGTTCGCCCTAGAACACCCAGAACATCAAACCTAGGGGACCATCCCCTAGCCTACCTTATGTTCGCCCAAGAACATCAAATTTTAAAGCATTCGGTCGTTCGGCCTCAAAGGTATTCGCCCTTTGGCTTCAACCGCTCGACCATCCATGGCCACGAGCGCTCTAGTGTTCGGACATTCGGCCTCAACCGTTCGGTCATTCGGTCTCACTGACGTTCGGCCGCTTGGCCTCAACCCTTAGGCCTTAATCGTTTGGCTTTCCGTGGCCTCAAGCGTACAGAATTCGGCCTCACTGACACTCGGCCACCCGGCATCTGCCGTCCGTGGCCTCAAGCGTTTCAGCATTCAGCCTCACTGACGTTCGGCCATACAGCCTCTACCGCTCGGCCATACATGTCCTCACGTGTTCAAACACTCAATCGTTCAGCCGTTCGCGGCCTTAAGCGTTTCAGCTTTTTGTCGTTCGGCTTCGCATCTTTTTGGTCCTTCGAACTCAACCGCTCGGTCATCCTTGTTTAAAACGTTCAACTGCTCGGTCTAGGGCAAAAAGAAAACCCATAAAACCCGCCGTTCAGTCCATAGATGAGCAACGACCGGAAACACGCTCCCTAACACAGCGAATACAGCCTCCCTCAAACTCATAAGTCCTATAGTTACCACGTCCATAAAACAGAACGGTTAACTCGGACTTGGGGGCATGTTATATAGTAAGATATTTATTAGATAAAATATCTTAGATATTTTAAGCGGTTAAGATATTCATGAGTAACTAACCAAATTTTTAGGTAAGGTTATTTTTATTTGGCTTATAAATACAATGACTGGGCAAAAGTTCAGGTACGTTCCCTCTACGTTCTACAGACTCTGGATAATAGTCTAGGGTGATATTATAATCACTTTCTTGAGAGCTGAGGCTCCATAACTCACATCTGACTTGAGCGTCGGAGTATCTTTGCAGGTACCTCCCCCTCCATTTGCATGCAAGCTGAAAGAGCGTGAACGACAACAATTGAGGAGAAGCGAGCATCCCAGACATTTAAAAGCAACAAAGATACACCGGAAAACATCTACACCGAAACAAGAACCTATATATAATTAAAAATCATGTTTCATGATTATCTCGAGTGAACAATTGTATCTCCAAATCATGCCAACACTACCACTGTATGTTTAAGCTTAAAACTACATAATTATTTTACTTCTCTGTTTTAAATTTGCACAGCTTAAAGCTTAGATTTACATTTAAGTTATATTCTTCGGTTTTAATTTATATGTTTTAGATTTGCACAGCCTAAATTATTTGACACGTTTGAACGCAATAATAAAATGAACTCTTCTGACAGGTGAGTATTGATATATCGAATTAAGGGGATTTATGTTTGATGCATTTTCAGGATTTTATTATTTTTCTGATCGCATGAGGGGATTGTTAAAACTAGCATTGATTGCAAAAGAAAAATCCAGTTTTAAGTCAACACGTAGAAGATTGATGGAGCTTTCCCACTTACTTCCTTTGAAATTTCTACAATAAAAAATAAAATAAAGGGATTAAACCCCCATCCAAAAAAAATAAAGCAAACCTTGCTTGAGAAACAACACAGTGCTCATGCTCATCAAAATTTGGAGGTGGCTACATCAGCCAAAGGTATGGAGATTTGTGTGTTTTGCTTCATCTATCGTTGGCCTTATCTGTTATGCTTTGAGCTCCTCTTTCAATCATTTACTTGGAAATTGGACCTGGTGGAAGTTACTTCTTTACATTATTTTCAGTTTTTTAATTTCCCTTTCCACCTTGTTTGGAAAGACATGGGAATACTCCAACTCTCGCTGTTTGGAAGCTCACACAGCATTTTCTGTTTTGCTTATCACTTCTGTATACTCCTTTTTCCTTGATAAAGATCTGAAACAGAAAGCAGATGCCTATAGTCTGCTTTCTTGTGTTGCTTTTGCTATCA


Gene Sequence:
>Vu_00246(+)
ATGTCTCTAGGCTTGTCTAGGCTGAGTCAGTTAGGATTTGAGGTTGATCTCCTGTATTTTTTCTGTGGACTTCTGACCGTACAACTCATGAAAATAAAACCGTGGTTAGTCACTGTTGGAGGAGCTTTCAGTTATTCCCTCATCATTCTTCGTTCCAATTTGGATCCTCAACCAAGAAGTGGGTATCATGGACTTCAATACCAAGATCATGTAGTGGTTGAAATTGGTTCTCATTCACAACCACAAGGAATCAGTAATAGTGTTACTCAAGTGGATTCAACCCGAACCATTATGGCTAGTTCACAACCTCATCCTGTCATTGATATGGTCTGGCCTTCAAGAGGAACAAGGCGTAGTGCTTCTCTAGTAATTTCACCTCAAGAGGGTGGTTCTGGTGGTGGCCCTCCCGAAAACATTTATGGTACCGAGGAATGCTTCATGGGTTGTATAGAGGCTCTTAAGAAGGAGAATGGGAACGTTATCAGAGCAATTTCCATGCATGTAGACAAATACCTTAAAGCTAGTGTTCTTTATGAGGAGGAGATTTCAGTGGCAGAATTGCATGGCGACGACAACATGGTGGTGGATTCATTGTCGTCAGGAATGATCATCAAGCTTCGTGAAAGTGTAGAGAAGATGGTGTCAGATCGATTTGAGGAGGAATGCTTGCACGTTTACAGTAATTGTCGGAGGGAGTTTCTGAAAGAGAGCCTCTGGGCATTAGGGTTGCAGGATCAAGAGCTCAACGGGGAGGACATTAACAAGTCGGAGAAGAATGAGAGGCTGATAAAAGCTATGAATATAGCGGCGAGGATACTCTTTCCCAATGAAAAAAGACTCTTCAATCGTGTCTTTAGCCGCTCCATTCCCAATGGGGAGTTTAATTTCAGGGAACTTTGCACGGAATTGGCTACTAGTCTGCTGAACTCTGCCCTTGCCTTGGCAACTTGGAGCCATTTCATGCGCAACACATTGCAGGAGTTGATACAAGAGTTTGAATCATTTACAACACTCTTAAATATTGTAGTGCTCCTGATAAGGCAGAGATTGTGCATTTATGAAGCTTCGGAAAATGTATCACTCATTCCTGGTGGCGGGATTCATCCTATTACCCTTGAAGGGATGTACTATACTTATTCGGTTTACAGAAATAGGGAAATTAGGAAACTTAGCCAAGATTTAAAGGAGGGAAAGATTCCAGCATCTGTGTACATAGACAAAGTGAGAATTCTGTTAAAGAGTAGTTTGGACGATAAGTCAAAAAATGGTAATAAGCTTGAAGTGATGTACTACATTAAATCTCTACACCAAAGTAGGGAGAATAAACTTAGACTAGGTTTAGATGAAATGATTTCACCTGTGTGTAATTACAAGATGATAGAGCTTGTAGAGAGCAGTTTAGAAGCCAACTCCAAAAATTACAAAAACCCTTCTTTGCGTTATGTTTTCATCATGAACAACCGGCGATTCATTGAAGTAGAGACAAAACTGAATGGACTGGGACTTTCTTTTGGAGATGACTGGCTCCACAAAAACACAAGAAAGATCCAAGAAAACCTTGAGCTCTATCTAAGAAGCTCATGGAATAAGATTGTGGACCTTTTGAGGGTAGACATCAATCAACCAGAGTCTAGTGTTGTAGCCGAGTTGATGAAAGACAACCTTTATTGGTTCAACGAACACTTTGATGAGACATGCAACATTCAGTCTGCATGGTCTGTCTGTGATGAGGAGCTAAGGGAACAAGTAATAAAATCCATAGAAAACATGCTGTTGCCAGCTTATGGAAGTTTCCTTGGCACATTTGAGCAACTTGTTGGGAAGCATGCTTATAAGTACATTAGGTATGGAATGTTTGAGGTTCAAGATCGACTCAACAAATTGTTTCTTTTAAGGGAGTAG