Gene Details:

Gene ID Chr. No. Start Position End Position Function
Vu_37480 scaffold_866 6001 7604 hypothetical protein LR48

Annotations  
category   relationship type   keyword
Biological Process   involved in   signal transduction
Cellular Component   located in   extracellular region, extracellular region, extracellular region, extracellular region, extracellular region
SNP Position Effect Amino acid change
G/A 6300 downstream_gene_variant
G/A 6336 downstream_gene_variant
C/A 6348 downstream_gene_variant
A/G 6432 downstream_gene_variant
T/C 6466 downstream_gene_variant
C/A 6485 downstream_gene_variant
C/G,T 6620 synonymous_variant p.Pro291Pro
G/A 6666 missense_variant p.Thr276Met
A/C 6726 downstream_gene_variant
A/G 6853 missense_variant p.Ile251Thr
T/G 6892 missense_variant p.Tyr238Ser
C/A 6945 synonymous_variant p.Leu220Leu
T/C 6967 missense_variant p.Lys213Arg
T/A 7037 missense_variant p.Ser190Cys
T/C 7067 missense_variant p.Asn180Asp
G/A 7090 missense_variant p.Thr172Ile
A/C 7095 missense_variant p.Ser170Arg
T/A 7146 synonymous_variant p.Ile153Ile
T/C 7295 missense_variant p.Thr104Ala
A/T 7302 synonymous_variant p.Ile101Ile
A/G 7303 missense_variant p.Ile101Thr
T/C,A 7304 missense_variant p.Ile101Phe
T/G 7306 missense_variant p.Glu100Ala
T/C 7364 missense_variant p.Asn81Asp
A/G 7378 missense_variant p.Leu76Ser
A/C 7379 missense_variant p.Leu76Val
T/C 7403 missense_variant p.Asn68Asp
G/A 7413 synonymous_variant p.Pro64Pro
T/C 7458 synonymous_variant p.Glu49Glu
T/A 7459 missense_variant p.Glu49Val
C/G 7473 missense_variant p.Lys44Asn
C/G 7479 missense_variant p.Met42Ile
T/C 7481 missense_variant p.Met42Val
A/T 7525 stop_gained p.Leu27*
A/T 7526 missense_variant p.Leu27Ile
T/G 7548 missense_variant p.Gln19His
T/A 7565 missense_variant p.Thr14Ser
T/C 7566 synonymous_variant p.Pro13Pro
T/C 7575 synonymous_variant p.Ala10Ala
T/A 7578 synonymous_variant p.Pro9Pro

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_37480.1
MCGCELNLPAEIPTFLSNQTSLRFLDLSRNNLVGKFPSWLLMNKPNLEEVYLFDNSFTGPFELPFDKNHRMDQMTLLSIANNKLQGELPNNVGFFFPRLEILDTSNNKFDGPIPVSIGEMSSLVELFLGSNNFSGNVPEYILNRCFSLESLTIENNQINGSLLSTIRKLSLTYLAASGNNIEGAITDEWSQHELYMLDISYNKFSGALPSCFKTPEYLFLQGNNFTGTIPELFMSNHYRAVAIDFSDNKFIGTIPDSVYKLCGSIPACFSNMSFGNVTGPFYPTDREKPFTAGRPLVFCCMLCHGNPSVGDTPLVQSSLLENVVLFCGRVPS*


CDS Sequence:
>Vu_37480.1
ATGTGCGGTTGTGAGTTAAACTTACCAGCAGAAATTCCAACTTTCCTTTCAAATCAAACTAGCTTGAGATTTCTTGATTTATCAAGAAATAACCTTGTTGGTAAGTTTCCTAGCTGGTTGCTCATGAACAAGCCAAATTTAGAAGAAGTCTACTTATTTGATAATTCTTTCACTGGACCTTTTGAACTACCCTTTGATAAAAATCATCGCATGGATCAAATGACATTGTTGTCCATAGCAAACAACAAATTGCAAGGCGAGCTCCCCAACAACGTTGGATTCTTCTTCCCACGTTTGGAGATTTTGGATACCTCAAACAATAAGTTTGATGGTCCTATTCCGGTTTCAATTGGAGAGATGTCAAGCTTAGTGGAGTTGTTTCTAGGGAGCAATAACTTTTCTGGCAATGTACCTGAGTACATTCTTAACAGATGCTTCTCATTAGAATCATTGACGATAGAGAATAACCAGATCAATGGATCACTATTGAGTACTATCAGAAAGCTTAGTCTTACTTATTTAGCTGCGTCAGGGAACAACATTGAAGGAGCAATAACAGATGAATGGAGCCAACATGAGTTGTACATGTTAGACATATCTTACAATAAGTTCTCTGGTGCACTGCCCTCCTGCTTCAAAACGCCAGAATACTTGTTCCTGCAGGGAAACAATTTTACAGGCACGATACCTGAATTATTCATGAGCAACCACTATAGAGCAGTAGCCATTGATTTTAGTGACAACAAGTTTATTGGAACAATACCTGATAGTGTATACAAGCTTTGTGGGTCCATACCTGCTTGCTTCAGTAATATGTCATTCGGAAACGTTACCGGTCCCTTTTATCCTACTGATAGGGAAAAACCATTTACCGCTGGACGTCCTCTTGTGTTTTGCTGCATGTTATGTCATGGTAATCCTAGCGTTGGTGACACTCCTTTGGTTCAGTCCTCATTGCTGGAGAATGTGGTTTTATTTTGTGGACGTGTGCCTTCGTAA


Promoter Sequence:
>Vu_37480::scaffold_866:7604-9604(-)
TGCATTTGTTTTTTTAGCTGCAACAGTCATGTATTTAATCAATACCTGTAATAAACTAACATAATATTTCAGATGCCCATAGCGTTGAGTTCTATGTATTCAAGAAGTTGAAGACACTGAACTTAGCTGACAATAATTTTGACAAGGGAATATTCAAGTCCTTAGTGTTTTGGGGAAAGAGTGGTATCAATCCCTTATATGATTGAGGTCAGATGTCATTAGTGTTTGTGGTTCCCAAGTGAATCTCCTCTTCAATAGACCCACGGTTATCATGAGATTTTTACATTAAAGTTAAAATTAATAGAGGTAAATATCGTCGATCACAAAGATAAAATCTTGCAAGACACAATGTCATCATGAGATTTTTAGATTATGTTAGTTGGAAGTACAAGAATGAATCTTGAGTTAAAGTTTCAGATCATCTATACTAAACTCATAACCTAACTTGTATAGAAGTTAATTTGAATTAGGTCAAATTTGACAAAATCATAAATAAAACTCAATCCGGTCTTATTGACTAAGTCATGTATTTACAAACTACAACGTAACGTTTGTGTAATTTTATTTGCTTACCGTCTATTTTAACAAACCTTATCAATTAATCACAGGTTACGCGATGTGGACGGAAGCTGATTAAAAATAACCATCTATTTGCAAACCTATTGAGAGAACAATTTATATTGCTAATTCACATGGATTATAGAAAAATTATTAAATTAATTTTATAAGAAATTTCAAAAAATTGTCTAAAGGATACAAAATTCTGCATTTGTTTTTCTAGCTGCAACAGTGATGTAATTTAATCAATACCTATAATAAACTAACACAATATTTCAGATGCCCATAGCATTGAGTTCTATGTATTCAAGAAGTTGAAGACACTTAACTTGGCTGACAATTATTTGGACAAGGGAATATTGAAGTCGTTAGTTGCTTTCCCCGCTCTCAGATTTTTGGACCTAGGTTTTAATCCAATCAAAGTGGATCTTGATGAAAAAGGTATGTTTGCCCTACGATATTTCATTCTTTAACTTTGATTTCTGCATTCGAAGTATCAATTAAGAGTATGTATAAGCTAATAATATTGGTAAATAACCTCTTTTATTCTTTGCTGAAGTTTTGTCTGATCTAAGCAAACTGGAAGTTCTTCACCTAAGTAACGCAGGTATCAATGGAATTTTACCAAATCAAGGTGAGCATGTATCACTTCTGTGATTCTTTTTGTCCTTGTTCCAAATCTATTATACGTATACATTAGTAGCATATACTTTAAGTGTATTATTATTATTATTATTATAAGAGTTTAACAACTATACTTGTTGAATTATCAATCAATTAAAAATAACTCTCTAGAGACAAGATCCCTTAATGTGTGGATCCAATGATTTGATTTGATACTGTCAGTCAATCTTTGTAGTTAGTGTAATTATCAATGGCTGTTAGCATTATTTGTTACCTTATTTGGTTGTAGTATCTAGCCTTAATCATAGGATCTTGTATTGCTAGTATCTGCTATATATGTACACGGGTAATCATCAGATTAAATATATCTTGATTTACCTCTCGTTACCTTTTCTAACTCTCATGAATTTAAGGTAGTTGTAAAAATAAATAAATTTTGACATAGTAAACAATAGATTTTTTTTTTTTTTAACATAACCTGTCACTGTCTGAATATAGGTTTGTGTAAAATGAAGCAACTTCAGGAACTAGATCTGTCATTCAATAATCTGAGAGGAACTTTGGATGCATGCCCTGACAACTTGACATCATTTCGCATTCTTGATGTCTCCTTCAACTACTTAAATGGGAATGTGACACCCTTCCTTGCTCAACTGACATCTGCCGAGCTTCTTGGCATTGGATTCAATGACTTTGAGATATTCTCATTCAACTTTTTTGCCAACCATTCAAAGCTTAAGTATTTACTCATTGGCAATATGAAAGTGGAAACCGAAAATCCGCCTTGGGTTGCATCATTTCAGTTGGAAGGACTCCAA


Gene Sequence:
>Vu_37480(-)
ATGTGCGGTTGTGAGTTAAACTTACCAGCAGAAATTCCAACTTTCCTTTCAAATCAAACTAGCTTGAGATTTCTTGATTTATCAAGAAATAACCTTGTTGGTAAGTTTCCTAGCTGGTTGCTCATGAACAAGCCAAATTTAGAAGAAGTCTACTTATTTGATAATTCTTTCACTGGACCTTTTGAACTACCCTTTGATAAAAATCATCGCATGGATCAAATGACATTGTTGTCCATAGCAAACAACAAATTGCAAGGCGAGCTCCCCAACAACGTTGGATTCTTCTTCCCACGTTTGGAGATTTTGGATACCTCAAACAATAAGTTTGATGGTCCTATTCCGGTTTCAATTGGAGAGATGTCAAGCTTAGTGGAGTTGTTTCTAGGGAGCAATAACTTTTCTGGCAATGTACCTGAGTACATTCTTAACAGATGCTTCTCATTAGAATCATTGACGATAGAGAATAACCAGATCAATGGATCACTATTGAGTACTATCAGAAAGCTTAGTCTTACTTATTTAGCTGCGTCAGGGAACAACATTGAAGGAGCAATAACAGATGAATGGAGCCAACATGAGTTGTACATGTTAGACATATCTTACAATAAGTTCTCTGGTGCACTGCCCTCCTGCTTCAAAACGCCAGAATACTTGTTCCTGCAGGGAAACAATTTTACAGGCACGATACCTGAATTATTCATGAGCAACCACTATAGAGCAGTAGCCATTGATTTTAGTGACAACAAGTTTATTGGAACAATACCTGATAGTGTATACAAGCTTTGGTCTTTAAATTTTCTTTTATTGGCTGGTAATCACTTGCAAGGCCAAATTTCCAGTCAAATATGCCAATTAAAACATATCAATATCTTAGACCTTTCGAAAAATAATTTCAGTGGGTCCATACCTGCTTGCTTCAGTAATATGTCATTCGGAAACGTTACCGGTCCCTTTTATCCTACTGATAGGGAAAAACCATTTACCGCTGGACGTCCTCTTGTGGTAATGCAACTCAGAACAAAAAATTTATATCTTTCCTTCGGCAGTGATAGATATCAGTTACTGTCCGAACTAGATTTGTCATGTAATCAATTGACAGGAGAGATTCCACACGAATTAGGAGATCTACATGGCCTTCATTCTCTCAACTTATCTCACAACCATCTAAATGGTCTGATCCCAGAGAGCTTCCAGAAGCTACAAAATATAGAAAGTTTAGATATTTCAAATAACAACCTGAGTGGACAAATCCCTCTGCAGTTACAGGACTTGCACTATTTGGCTGTCTTCAATGTTTCCTACAACAATTTGTCAGGAAGAGCACTTGAAAAGGGACAGTTTTGTACCTTTGATGAGAGTAGCTACAAAGGAAATCCGTATCTTACGTGGGATACCTGTAAAAGTGAACGTTCAAAACCACCACTACGACCAACTCTGTTGCCTGGTGAAGTAGAAGAAGAAAACTCTGAAATTGATTTCAATGTCTTCTGTTGGAGTTTTGCTGCATGTTATGTCATGGTAATCCTAGCGTTGGTGACACTCCTTTGGTTCAGTCCTCATTGCTGGAGAATGTGGTTTTATTTTGTGGACGTGTGCCTTCGTAA