Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_37229 LG11 33507118 33509123 PREDICTED: probable WRKY transcription factor 40 isoform X1
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 33507523 downstream_gene_variant
A/C 33507536 downstream_gene_variant
C/T 33507640 downstream_gene_variant
G/A 33507648 downstream_gene_variant
G/T 33507664 downstream_gene_variant
G/A 33507678 downstream_gene_variant
A/T 33507687 downstream_gene_variant
T/C 33507793 synonymous_variant p.Thr57Thr
T/A 33507922 synonymous_variant p.Gly100Gly
A/G 33508076 missense_variant p.Lys152Glu
T/C 33508082 missense_variant p.Ser154Pro
A/T 33508084 synonymous_variant p.Ser154Ser
T/G 33508140 downstream_gene_variant
C/T 33508151 downstream_gene_variant
G/T 33508424 missense_variant p.Glu235Asp
G/A 33508521 missense_variant p.Gly268Ser
G/A 33508697 3_prime_UTR_variant
G/A 33508868 3_prime_UTR_variant
T/A 33508878 3_prime_UTR_variant
T/C 33508956 3_prime_UTR_variant
C/T 33509016 3_prime_UTR_variant
T/C 33509042 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_37229.1
MDCSSWINTSLDLNINPRRVHRELPKEVESKLFSLGMPKFNVEECWESKRPIKDESTSDLEEELKRVTAENKKLAEMLSVVCENYNTLRSHLMEYTRKNGEKETSPTSKKRKSESSNNNSICVMGTNNGNSESSSTDEESCKKPREETMKPKISRVYVRTEASDTTLIVKDGYQWRKYGQKVTRDNPCPRAYFKCSFAPSCPVKKKVQRSVDDQSVLVATYEGEHNHPQASSQMEATSGSGRSVTLASVPCAAATPTLVTLDLTKSKGSNDSKSTKTKVDTPKVQQVLVEQMATSLTTDPNFRAALVAAISGRLLHNN*


CDS Sequence:
>Vu_37229.1
ATGGATTGTTCATCATGGATCAACACTTCCTTGGATCTCAACATTAACCCACGCAGAGTTCATCGAGAACTTCCCAAGGAGGTAGAAAGCAAGCTTTTTTCTTTGGGAATGCCCAAGTTTAACGTCGAAGAATGTTGGGAATCTAAAAGACCCATCAAAGATGAGTCTACTAGTGACTTGGAGGAGGAACTGAAGCGGGTGACAGCAGAAAACAAGAAGTTGGCTGAAATGCTGTCGGTGGTGTGTGAGAACTACAACACTTTGCGAAGCCATTTGATGGAATATACGAGGAAAAATGGTGAAAAAGAGACCAGCCCGACATCAAAGAAAAGGAAGTCTGAAAGCAGCAACAACAATAGTATTTGTGTGATGGGAACTAATAATGGAAACTCCGAGAGCAGTTCCACTGATGAAGAATCTTGCAAGAAACCGAGGGAAGAAACCATGAAACCAAAAATTTCAAGAGTTTATGTCAGGACCGAAGCATCTGACACCACCCTTATTGTGAAAGATGGGTACCAGTGGAGGAAGTATGGGCAAAAAGTGACCAGAGATAACCCATGTCCAAGAGCATATTTCAAATGCTCTTTTGCTCCAAGCTGCCCTGTAAAAAAGAAGGTGCAAAGAAGTGTGGATGATCAATCTGTTCTGGTTGCTACTTATGAAGGGGAGCACAACCATCCCCAAGCTTCTTCACAAATGGAGGCAACATCAGGTTCTGGGCGTAGTGTGACCCTTGCTTCAGTGCCTTGTGCAGCTGCCACTCCAACACTTGTTACCCTTGACTTGACAAAATCTAAGGGCAGCAACGATTCCAAGAGCACGAAAACTAAAGTAGATACACCTAAAGTGCAGCAGGTTTTGGTGGAACAGATGGCAACTTCTTTGACCACGGATCCTAATTTCAGAGCAGCACTTGTTGCTGCCATCTCAGGAAGATTGTTGCACAATAATTGA


Promoter Sequence:
>Vu_37229::LG11:33505118-33507118(+)
AAATGCCACGTCTGATTACTGTAACGGCCGTTTGTCCAAATTAACGGCAGGCCTGTGATTGATTCAATTTTACAAAAAAAAGGACTCAATTGATACGCCGAAAATGAAGAGGACCTATTTGAAATTCATGACCAAAATAGGGACCTACGGAGACATTAAACCTACTTTTTTCTATTATCCATTCAAATTTTGTTTTCATAAATTAAGAACAAAACAGAAAATTAATAAAAATAAAAAGAAATAAAATAAGATTGCAAATTCAAACTTTTCACACTAGGTATAATTAATGTACCGTATGGACGGTTACGCAAAGGTATCGATGTCAAGTCAGATCGGACGTCGTCAACAATCAAGAACAAAGTGATTGAATGTAACAGAATCGACACATATAATCAGATGACTATAAGTGGATGTCTAACTTCCCATACAAGGATTAAGATAATAAGTGATTAAATGTATTGGAATGAGATTGAACCATGATTAATATCTTCCCGATCTCAAGTCCGAAAACTATATATACAGGTAAAAAATGAGTGGTAGGTGATCGTTTTTCTGTGCATTTATTACCAGCATTGAGTTATCGTGTGAACAGTTATCGGAGAACTTTTGATAAGTACACCTCCAAACGATAGAGTAAAAACAATACTTAAAGCCACTCCACGTTGTCATTGTCATCTTGCTAGATTCAATTGAATTCAACCAAAAATAAGATATAACACCAACCAATGAAATATATGCAGTCTTCCACATAGTGAGAAATTCAAATTGGAAAATGGGATAAAAGGTTGGTGAATTTTTGTAGCTGAGTTTTTGGACCACAATATAAGAGACTTTTAAAAATTGCATGGCAGAAGAGTGAGTGTGGGGCTTAAAGAAGAGAAGAAAGTAAAGAGTGGGCATAGAAAATAGGTTATAATAGATGGAACGTGGAAAATGTTTGAAATGGTTAAAGTGAAAACAAAGAAAGAAGGGACCACATACAGAGCACCCACACACTGCTTTATAAGAGTTCAGATAACACAGCCAAACAACAAAACACTTGCCTTCGGTCAACAAACAACTCTCTCCATTTTTTTTCTTTTTTCTACATTATCTAAAATCACTTTTTTATTTATATTAAAACATTTTACTAAGTTCTTTTTTCTTTTTGGAGTGAAAATTTTCATATAATATTTTCACTTTTTACTTAAAAATATACTTAATCTGATATTATACTAACACTCATTTATAAACGAGAGAGTAAGAAATTAAGAATTAATAAAAGAAATATTTTTTGACACACCTAAAATTTTTCATATTTATTTGATTTTTTTTTTACTTTTCTTAAAAAATATATATAAATATTTATACTTTTACGATGATTTTATCCTTAGGTGAAAGTTTACGATGAAACCAGTAATGAATGTACAGTGAGAGGAGTAAGGATAACACAGTACACTTTAATATTTATTTGACATAGAATAAAATGATCTTTAGACTTTTATAGTTGTTTGGAAAAATAAATAAGAAATAAAAAAAATAATATCAAATGTAAAAAAGTTATTTATATTAAAATATCATATTTTTCTATTGAGATACAGATGCAAAGATCGTAATCTTGTTCAGGTGACACATTGGCCCACTTGAAGCCAGAATTTATTATGGATTGATTTGATGAAGAGGTGTGGTTTGACTTGGAAATTTCATTCACCCAGTCACATAAATAATAATATTCTAATTTAAGAACACATGGATCCGCACGTTCTTATCTGTTATGCTTCTAGTACTTCTCACACTACGTGTTAAAAGTAATAAATAATAAATAAAAAAGAACAGGAACAGGAACAGAAGAACTTCATGGTCGATTAACGTTGGAGAGAGATATCTTAAAAGAAGCAAGTGGCTTATTGTTTCGCATGTGTCTCTTTCCACTCAGTTTCCTTCCTCAACTTGAGTTCCTTCTATCTAGTGCTGCCTCCGCTACCTGCTCTATATATATGCTTCTTTTTCCTTCCACTTTC


Gene Sequence:
>Vu_37229(+)
CTGAAACTTTTGCCATTTTCCTTCTTCCAACATACTAAACTACAAACTAAGACAAAACAAAACACCTTTTTGAGTTTTGTTCAAAGATGGATTGTTCATCATGGATCAACACTTCCTTGGATCTCAACATTAACCCACGCAGAGTTCATCGAGAACTTCCCGTAAGTGTATATATATATATGTCATTCTTCTGGTGACCATTCCCAGAAGAAGAAGCATTTATGGGACATGCTTTCGTTCTGATTATAGTTTGATATACATGGAAGCAATTCATTCATTGTCGTCTGTTGATTTCAGAAGGAGGTAGAAAGCAAGCTTTTTTCTTTGGGAATGCCCAAGTTTAACGTCGAAGAATGTTGGGAATCTAAAAGACCCATCAAAGATGAGGTTAGTTCACCCAGTTAACTGTTTCTTCTTTAACTTCCTTCAAGATCTTTATTATATCTCCGATGGTTAGTTTGAAACGAAACCGTGATCTTATTTATATATATTTTGAAAAGAAGAAACAGATTAAAAAAGGTGCCAAATTCGTGAATTAAAAGAAAAGTAGGACATGAAAAGAAAACAGAAGTATTTATTTGATGATGTTCCCTGAGACAAAGATCCGGGTCTTGAGGATGAAATTCTGTGAATGGTTCTAACATGGATGATGTTATTGGCGACATTTCAGTCTACTAGTGACTTGGAGGAGGAACTGAAGCGGGTGACAGCAGAAAACAAGAAGTTGGCTGAAATGCTGTCGGTGGTGTGTGAGAACTACAACACTTTGCGAAGCCATTTGATGGAATATACGAGGAAAAATGGTGAAAAAGAGACCAGCCCGACATCAAAGAAAAGGAAGTCTGAAAGCAGCAACAACAATAGTATTTGTGTGATGGGAACTAATAATGGAAACTCCGAGAGCAGTTCCACTGATGAAGAATCTTGCAAGAAACCGAGGGAAGAAACCATGAAACCAAAAATTTCAAGAGTTTATGTCAGGACCGAAGCATCTGACACCACCCTTGTAAGACTCTTTACATTAATTTCCTATCAGGCATGGTTAATAGCATAAAATATTAGGAGTAACTGTTTGACAGGTTTTTCATTGTATGTGGTTTCAGATTGTGAAAGATGGGTACCAGTGGAGGAAGTATGGGCAAAAAGTGACCAGAGATAACCCATGTCCAAGAGCATATTTCAAATGCTCTTTTGCTCCAAGCTGCCCTGTAAAAAAGAAGGTGCAAAGAAGTGTGGATGATCAATCTGTTCTGGTTGCTACTTATGAAGGGGAGCACAACCATCCCCAAGCTTCTTCACAAATGGAGGCAACATCAGGTTCTGGGCGTAGTGTGACCCTTGCTTCAGTGCCTTGTGCAGCTGCCACTCCAACACTTGTTACCCTTGACTTGACAAAATCTAAGGGCAGCAACGATTCCAAGAGCACGAAAACTAAAGTAGATACACCTAAAGTGCAGCAGGTTTTGGTGGAACAGATGGCAACTTCTTTGACCACGGATCCTAATTTCAGAGCAGCACTTGTTGCTGCCATCTCAGGAAGATTGTTGCACAATAATTGAGTGGAAATTTTGGTTGATGTGGCTAATTTAGTGTCAATGTTTAAGTATATTCCATAAAATGGAGATCATTCTTTAGAGCACAGGATCTCTCTGTGTAAATACAACATGGAAGGCTGGTACATCTTTGATCCTTCAAGTGGAAATAAAGTTCCGCTAAGGATAAGTATGTTGAGCTGATTAAACAACAGAAAGATCAAAAGCTCTGCACCACCCATCTGCCTCATGATGATGGTAAAGATTTAGCAAGCCTTTTTTGGCCAATATATCTGGCCCTCCGGATTTTGAATCTCCTGAAGTTTAACTGTACAGACTCAAGATCCTAGTACTACTTTTACAATTCTATTTCGAGAACTTGTCTTACATGTTGATCAAGTATTGTAAGTGATAGTTTGTAACTCGAAACATTGAGGAATGAAAAGGAAAATCTGCATGATTAGACTTTGGACT