Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_37204 LG11 33356187 33356777 PREDICTED: ethylene-responsive transcription factor ERF084-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, ethylene-activated signaling pathway, ethylene-activated signaling pathway, ethylene-activated signaling pathway, ethylene-activated signaling pathway
Cellular Component   located in   nucleus, intracellular anatomical structure
Molecular Function   enables   DNA-binding transcription factor activity, DNA-binding transcription factor activity
SNP Position Effect Amino acid change
C/T 33356494 missense_variant p.Thr103Met
G/A 33356496 missense_variant p.Ala104Thr
G/A 33356507 synonymous_variant p.Ala107Ala
G/A 33356508 missense_variant p.Ala108Thr
G/A 33356510 synonymous_variant p.Ala108Ala
G/A 33356512 missense_variant p.Arg109His
G/A 33356529 missense_variant p.Ala115Thr
G/A 33356533 missense_variant p.Arg116Lys
G/A 33356547 missense_variant p.Ala121Thr
C/T 33356548 missense_variant p.Ala121Val
G/A 33356555 synonymous_variant p.Ala123Ala
A/T 33356571 missense_variant p.Ile129Leu
G/A 33356579 synonymous_variant p.Ser131Ser
C/T 33356583 synonymous_variant p.Leu133Leu
T/C 33356588 synonymous_variant p.Pro134Pro
G/A 33356597 synonymous_variant p.Pro137Pro
G/T 33356600 synonymous_variant p.Ser138Ser
C/T 33356602 missense_variant p.Ser139Leu
A/G 33356625 missense_variant p.Lys147Glu
C/T 33356629 missense_variant p.Ala148Val
G/C 33356636 synonymous_variant p.Arg150Arg
G/A 33356643 missense_variant p.Ala153Thr
C/A 33356657 synonymous_variant p.Ser157Ser
C/T 33356678 synonymous_variant p.Ser164Ser
T/C 33356705 synonymous_variant p.Asp173Asp
C/T 33356708 synonymous_variant p.Gly174Gly
C/T 33356714 synonymous_variant p.Gly176Gly
G/T 33356717 missense_variant p.Glu177Asp
C/G 33356721 missense_variant p.Leu179Val
T/C 33356728 missense_variant p.Val181Ala
C/T 33356732 synonymous_variant p.Asp182Asp
G/A 33356735 synonymous_variant p.Val183Val
A/G 33356749 missense_variant p.Asp188Gly
A/C 33356754 synonymous_variant p.Arg190Arg
G/A 33356761 missense_variant p.Ser192Asn
T/A 33356774 synonymous_variant p.Ile196Ile

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_37204.1
MNDEIYLHAPTTATATAANVLLPKPETVSSHETGLEGIAAVVGEHVLFGTSSTLHVPETPKKTAGVSVNKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGAKARTNFKIPSVLPLSPSSEGGVVKPKAARNNARKCSSVEQLFSGVPQVRRNDGGGENLNVDVNLKLDVRNSRMVI*


CDS Sequence:
>Vu_37204.1
ATGAACGACGAAATCTACTTACACGCGCCAACCACCGCCACCGCCACCGCCGCTAACGTTTTGCTTCCGAAGCCCGAAACGGTGTCGTCGCACGAAACGGGGCTCGAAGGGATTGCCGCGGTTGTTGGAGAACACGTCCTTTTCGGAACGTCGTCGACGTTGCATGTTCCAGAGACGCCGAAGAAAACGGCTGGGGTGTCGGTGAACAAGAGTTACCGAGGAGTGAGGAAGAGACCGTGGGGGAGGTGGTCGGCGGAGATACGCGACCGGATCGGGCGGTGCCGCCACTGGCTGGGGACGTTCGACACGGCGGAGGAAGCGGCGCGTGCGTACGACGCGGCGGCGAGAAGACTTAGAGGCGCGAAGGCGAGGACCAACTTCAAGATACCCTCGGTGCTGCCTCTTTCTCCGTCGTCGGAAGGTGGTGTTGTGAAGCCGAAAGCTGCCCGGAATAACGCCAGGAAGTGTTCCTCTGTGGAACAATTGTTCAGCGGTGTACCTCAAGTTCGAAGAAACGATGGCGGTGGCGAGAATCTGAACGTAGACGTGAATTTGAAGCTGGATGTGAGGAACAGTAGAATGGTTATTTAG


Promoter Sequence:
>Vu_37204::LG11:33354187-33356187(+)
ATTTTTTAAATTAAAATAAAAAACTGTTAATCTCACTTTATTAAAAATATAAAAGATCAAAAACACATTTATTTTTTCATAAATATTACAATGATCTTTTTAAAAAGTATCCGAGATATACTTCTATGATCGACTCTTAATAATTTTATCATTTAGTACATGCATGAATTATATTAAAGTTTCATTATAACGATTAAAAAATTATTAATTTTAATTTGTTGGAATTATCTTCTCCTCAATTAGGGATATCCATGAGTTGGCAAACTAGTTCGTAAAAAGTTATTAGAATAAATGTTAATATAATCATTGATCATCTTAATTATTTATTTTCTTTCTTACCTTTTCATACAAATTAAGAACATTGCTGTTTTTTATTTAACTAGAATCACCTAGTTTATATATTTCTCACATTACCAAAAGAAAATATGGATAGAAATGAGATCGAATCCTTGAACTTAAACTCAGTCCAATCCATACAATATTCTTTGTTCCTTTTAAGTGTCACATTTTTAAGAAAAAATTATTTAATTATTATTTTTAAATTTGAAGACAATAATAATTTTTCTTTCCTTTTATATTTTCTCTACACCTAATTTAAAAATTTACATTCATTGTTATATAAAAGTAAAAGAATAAAATAAAATAAAAACCTCTATAAATATTTCATTAAAGTTAAGAAAAACTCAGTGCATTCTTTATTTTTCCTATGTTAAATCTCATAAACACTATATATATATATATATATATATATATATATATATATATATATATATATATATATAGAACTAGGAAGCTTTATGCATGTGACTAATTAGGGTAGCATTCTGCATGCATCATTACACATAAATGCAACTAAGATATGAAGAAAGATAATAAAAAAAGATATCTTGCGAAGGGTATTTGAATTTAACAAAGAAAAGGCATGATGAATGGTAATCTGAATCTGAAATGAAAGTGGAAATCAAATCCGAAATCTTGGTGCATTAATTGTTTGCAATGCATCATCTGCATCTTCCCATCTATTCCATCACCTATGCATAATTGCTTCTTGACCTTTGAAAGACATCTTCATGACATCATGCACAGATCATAGTGCAAAATCTCATCATCCTCCCTTGCATCGTGTCGTGCATGCTGTTTTTCAACATTTTTTTGTAAAGCTATTATTATACTTTATTCATTCCTTTTCCTGCATAATATAATGTAAATAAGGCCAACGAAAAGTGTACCAGAAGAAGAATAATTATGACAAAGTTTGAATTAATGAGCAGGAGGAAAGTTAAAAATTATGGAAAGTTTGAAGTTATGAGGGTAATGGTTGCTGAGGTGATTCTGGTTTCCCCTGTGGTTATTTCGATGAACTGATAAAACTGATAAAAAAGAAAGGATTTGTACAGTCAATCATGTTTTGCAATTTTGCAGTCAAACAATCTTTTCCTTGACGACACTGTGACGCTCTTCCACTCATCTCTCTTTCTCATTCTCATGTAAATACTGTCATCGTTCTTTTACAAGGAGATCTCATCTCATCTTCAACCATGTGTTTTCAGTTCTTTCTTTCTGATACAACATAACATGCTGTTTTTCTCATCATATATTCATTCAAATTTATTCATTTATATATATTCAAGTTGATTTTGAAAACGTGAAAATGTAAAGAATAAAAAAGGGATGAAGGGGCCCGTGCTATATTAGGTGTGTTGTGTTAAGGGACCTTCTGAAAGGGTGTGTATCCCTACAACAGTACAGCCTACAGCCAGCCTAGGAAAGACAAACATGTAGATACGAGGGATTACAGTCTTTTCAGATTTCACACCAATATCTATCTAATATTTTCTCTAATTTCTTTTTTTCTGTTTGTTTAAATTTAATAAAGTTTACATTTTTAATATTTTTTCGACTAATTTTCTTCAACACGATATAAATATCTCCTTCCCATCTGTAGGGGCCACGACCACCTTTGATCCAAAAAGTCTAACTTTCATTCATACTTGTGACAA


Gene Sequence:
>Vu_37204(+)
ATGAACGACGAAATCTACTTACACGCGCCAACCACCGCCACCGCCACCGCCGCTAACGTTTTGCTTCCGAAGCCCGAAACGGTGTCGTCGCACGAAACGGGGCTCGAAGGGATTGCCGCGGTTGTTGGAGAACACGTCCTTTTCGGAACGTCGTCGACGTTGCATGTTCCAGAGACGCCGAAGAAAACGGCTGGGGTGTCGGTGAACAAGAGTTACCGAGGAGTGAGGAAGAGACCGTGGGGGAGGTGGTCGGCGGAGATACGCGACCGGATCGGGCGGTGCCGCCACTGGCTGGGGACGTTCGACACGGCGGAGGAAGCGGCGCGTGCGTACGACGCGGCGGCGAGAAGACTTAGAGGCGCGAAGGCGAGGACCAACTTCAAGATACCCTCGGTGCTGCCTCTTTCTCCGTCGTCGGAAGGTGGTGTTGTGAAGCCGAAAGCTGCCCGGAATAACGCCAGGAAGTGTTCCTCTGTGGAACAATTGTTCAGCGGTGTACCTCAAGTTCGAAGAAACGATGGCGGTGGCGAGAATCTGAACGTAGACGTGAATTTGAAGCTGGATGTGAGGAACAGTAGAATGGTTATTTAG