Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_37102 LG11 32558241 32561061 PREDICTED: transcription factor bHLH68-like isoform X2
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 32558258 5_prime_UTR_variant
A/T 32558440 missense_variant p.Gln47His
G/A 32558547 intron_variant
A/T 32558564 intron_variant
C/T 32558716 synonymous_variant p.Val87Val
T/C 32558746 synonymous_variant p.Ser97Ser
T/C 32558851 synonymous_variant p.Ala132Ala
G/A 32558985 intron_variant
T/C 32559002 intron_variant
C/T,* 32559188 intron_variant
A/G 32559205 intron_variant
G/T 32559273 missense_variant p.Glu189Asp
G/C 32559375 intron_variant
G/A 32559419 intron_variant
T/A 32559420 intron_variant
T/C 32559435 intron_variant
A/T,* 32559448 intron_variant
A/C,* 32559449 intron_variant
C/T 32559450 intron_variant
T/A 32559456 intron_variant
T/C 32559568 intron_variant
G/A 32559598 synonymous_variant p.Thr210Thr
A/T 32559616 missense_variant p.Glu216Asp
T/A,G 32559767 intron_variant
T/A 32559824 missense_variant p.Leu236Met
T/G 32559825 missense_variant p.Leu236Trp
T/A 32559896 intron_variant
C/A 32559946 intron_variant
T/A 32559954 intron_variant
C/A 32560037 missense_variant p.Pro263His
T/A 32560055 intron_variant
T/C 32560056 intron_variant
C/T 32560474 intron_variant
C/G,A 32560507 intron_variant
C/T 32560521 intron_variant
T/C 32560537 intron_variant
A/T 32560544 intron_variant
T/C 32560547 intron_variant
T/C 32560566 intron_variant
T/A 32560590 splice_region_variant&intron_variant
T/A 32560647 synonymous_variant p.Val297Val
T/C 32560650 synonymous_variant p.Pro298Pro
C/T 32560677 synonymous_variant p.Asn307Asn
C/T 32560683 synonymous_variant p.Asn309Asn
T/C 32560895 3_prime_UTR_variant
T/G 32560990 3_prime_UTR_variant
T/C 32561004 3_prime_UTR_variant
G/A 32561006 3_prime_UTR_variant
T/A 32561051 3_prime_UTR_variant
T/C,* 32561061 splice_region_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_37102.2
MMAGNPNWWTTHPPSLIPPQYVLGSSSIPFNSSTQNPDHEPPPSLSQLLFTGLPGEEERVAFSHFQSKKLDEWNEHMLNPPPINPMVDVIKQEVSQSGSFYHQGHDQEFQVSGAPWSHMVPVSSSPMSSVVASFSSNNLLDFTYNKEDHRKNQLPDHTSECNTTASAGVFKKTKCQPSSSQPPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSSPYLGNGSKNMRNPQSVHGERNSVFPEDPGQLLNDNGLKRKGAPNQDAKDKPKDLRSRGLCLVPVSCTQHVGNENGADYWAPAYGSGF*

>Vu_37102.1
MMAGNPNWWTTHPPSLIPPQYVLGSSSIPFNSSTQNPDHEPPPSLSQLLFTGLPGEEERVAFSHFQSKKLDEWNEHMLNPPPINPMVDVIKQEVSQSGSFYHQGHDQEFQVSGAPWSHMVPVSSSPMSSVVASFSSNNLLDFTYNKEDHRKNQLPDHTSECNTTASAGVFKKTKCQPSSSQPPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSSPYLGNGSKNMRNPQSQQVHGERNSVFPEDPGQLLNDNGLKRKGAPNQDAKDKPKDLRSRGLCLVPVSCTQHVGNENGADYWAPAYGSGF*


CDS Sequence:
>Vu_37102.2
ATGATGGCTGGCAACCCTAACTGGTGGACTACTCATCCACCATCTTTGATCCCTCCCCAGTATGTTCTTGGATCTTCTTCAATACCTTTCAATTCTTCCACACAAAACCCTGATCATGAGCCTCCTCCCTCGTTGAGCCAACTTCTTTTCACTGGTTTACCGGGAGAGGAGGAAAGAGTGGCATTCAGTCATTTTCAATCGAAAAAGTTGGATGAATGGAATGAGCACATGCTTAATCCACCCCCCATAAATCCTATGGTCGATGTAATAAAGCAAGAGGTTTCCCAAAGTGGCAGCTTCTATCACCAAGGACATGATCAGGAATTTCAGGTTTCTGGAGCTCCTTGGTCACACATGGTGCCTGTTTCTTCTTCTCCTATGTCTAGTGTTGTTGCTAGCTTCAGTAGTAATAATTTATTGGATTTCACTTATAACAAGGAAGATCATAGGAAGAACCAACTACCAGATCACACATCCGAGTGTAATACCACAGCAAGCGCTGGAGTTTTCAAGAAGACTAAGTGTCAACCATCTTCAAGCCAACCACCTCTCAAGGTGAGAAAGGAGAAGCTAGGTGATAGAATAACAGCCCTTCACCAGCTAGTTTCCCCATTCGGAAAGACTGACACGGCTTCTGTCTTGTTAGAAGCCATTGGATACATAAGATTCCTTCAGGGTCAAATTGAGGCTCTCAGTTCTCCTTACTTGGGCAATGGATCAAAAAACATGAGGAATCCACAGTCTGTACATGGAGAAAGAAATTCTGTATTTCCTGAGGACCCCGGTCAGCTGTTGAATGACAATGGCCTGAAAAGAAAGGGAGCTCCAAACCAGGATGCAAAAGATAAGCCAAAGGACTTGAGGAGTAGAGGGTTGTGCTTGGTTCCTGTGTCTTGTACCCAGCATGTTGGAAACGAAAACGGAGCTGATTACTGGGCACCGGCATATGGCAGTGGATTTTAA

>Vu_37102.1
ATGATGGCTGGCAACCCTAACTGGTGGACTACTCATCCACCATCTTTGATCCCTCCCCAGTATGTTCTTGGATCTTCTTCAATACCTTTCAATTCTTCCACACAAAACCCTGATCATGAGCCTCCTCCCTCGTTGAGCCAACTTCTTTTCACTGGTTTACCGGGAGAGGAGGAAAGAGTGGCATTCAGTCATTTTCAATCGAAAAAGTTGGATGAATGGAATGAGCACATGCTTAATCCACCCCCCATAAATCCTATGGTCGATGTAATAAAGCAAGAGGTTTCCCAAAGTGGCAGCTTCTATCACCAAGGACATGATCAGGAATTTCAGGTTTCTGGAGCTCCTTGGTCACACATGGTGCCTGTTTCTTCTTCTCCTATGTCTAGTGTTGTTGCTAGCTTCAGTAGTAATAATTTATTGGATTTCACTTATAACAAGGAAGATCATAGGAAGAACCAACTACCAGATCACACATCCGAGTGTAATACCACAGCAAGCGCTGGAGTTTTCAAGAAGACTAAGTGTCAACCATCTTCAAGCCAACCACCTCTCAAGGTGAGAAAGGAGAAGCTAGGTGATAGAATAACAGCCCTTCACCAGCTAGTTTCCCCATTCGGAAAGACTGACACGGCTTCTGTCTTGTTAGAAGCCATTGGATACATAAGATTCCTTCAGGGTCAAATTGAGGCTCTCAGTTCTCCTTACTTGGGCAATGGATCAAAAAACATGAGGAATCCACAGTCTCAACAGGTACATGGAGAAAGAAATTCTGTATTTCCTGAGGACCCCGGTCAGCTGTTGAATGACAATGGCCTGAAAAGAAAGGGAGCTCCAAACCAGGATGCAAAAGATAAGCCAAAGGACTTGAGGAGTAGAGGGTTGTGCTTGGTTCCTGTGTCTTGTACCCAGCATGTTGGAAACGAAAACGGAGCTGATTACTGGGCACCGGCATATGGCAGTGGATTTTAA


Promoter Sequence:
>Vu_37102::LG11:32556241-32558241(+)
CATGACAAAATACTCTTTAAATTTTAATTTTGTTGTCAATTTTTTTAAGTTTTTGTCTATTAATTCTTATCAACAATAATTTTTTGTCTATTTAACTGTGTTTAGTAATAATATTTTATTCAAATTGACTTAAATTAGTATTTTAGTATACACGATAAATATTTAATTTTTACAACTAAAATTTATAACGAACTTGCATAAATTATTAAAATTTAAATTTGAAGAAAATACTATTTTTATTTTTAACTGTGAAAAAAAAGTATGTAGTGACATTAGATTTTTTTAATTTTAATCATTATTTTTAGAATACTGAAACCTGCTAGTTGCTCCCTTAAAAAATGAGCAATTATGATATTATACTTTTAAAATATTCATTCCTTTCTCTTCAACTTGATCAAATGAAGATAGGTCAAAATGCATATCAAAACTTGTCACCTGACCTAGACAATTTATTAAAAAGGTCCCACTCTACTTTTTTAAAAAATAAAATATTTATTTAATTAAAGGTGTCACACTTCGAATCTTGAAACAAACCCTAACATAAATCGACTTATTATTATGAACGCATATAATACAACAAGAAGAAACAAATGTTGTCATGAATTTCTGAAATGAGTTACATTCATCCTTTATTTAACTTTAATCGAATTAATTATTAAAATCACTAATTAAAAAGTAAATAAAAACAAGGATAATAAAAAAATTTATCCTTCAGAATAAGTTTTTCTTAAAAAAAACAGTAATATTTTTTTTATGTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTATGTATATGCATATATACTATAGTTAGTTCAATTTAAGGCTACCTTTTTATAAAGTAGGTTTTTAATTCGACAAACTTTAAAGTCTTGCCAATTTTTGTAAAAGATAAATCTGTCTTAGTAAAGCTTTGTTTGTTCGGTAAAATTCAGATTCATATGTCTACCAAATAATTAAGCTTTGATCGAAATATCAAACGAATGATTTTCTGACAATCACCAAATTGATGTAAAGCAAAAAGATTATACATGGTAAAGGAAAATGAATTATAATTTATGTATAATGTCTCAAATAATTGTATAATTGTTAAGAGATGGACTTTACCACTTATATAGATATATTATTAAGATTGGTTCTAATTTGAGTCTGATACTGTATTAAAAAATAAATTTTAAGTTTAATTTAATCTTATAAAATTAACTTTAACAACTTGAAAGATGAGATTTATACTAATTTATATATTTTAAATTAATTTTATTTCTAATCGTTGTGGACTTACAGTGACATTGAAAGATATTATAAGGTGATTTTTAGTTTCTTGAATCAAATATTGTTGAAATCATAAAGCCTTGAAAGAGAAACATTAACTGAGTCTTGTTGTGATCTGAGAATGTTGATGATGTGTTTAGCAGTGAAGTTACAGAGAAGGTGGAAGTGAGGATATTTTGATGATGGAGTTGTATATATTGGTGTTGTTATTGTAATGAGGTTCTTAGATTCTGTAGTTTTGTTTGTTAAAGTGAATTATTGGTCTAGGGAATAAATAAAGCATCTGACATTGATCTCACTACTATTATGCCCTACCTCTACTAGAACCCTAGCTACCCCAAAAACAATCCCAAGGTGCAACCCCAAATTAAGGAAATAACTCTGAGCAACCATTAATTTATAGTCTTAAAACACTGCCCACCAGCTTTTGCGTTCCACTTTATAATAAAAAGGAATACTGAATAAATCAAACAAAGGAAAGAAAAAGTAACATATGCAAAGTTTCTCAACCTCAACTCTATAAAATACTGAGACCCCATAACTTTAAGTTTCTTCAACACCTAGTAACAAACCAAAACACTAACTCTAAGCTTTACCCAAACCCTTGTTTGGTTGCACATACAAGGAAATATCACAAAGGTGAAACACCAAAAGTATATGAAAAAGGAGATTAAATATTTCATTTCCTA


Gene Sequence:
>Vu_37102(+)
ACTTCTTCATTTGCATCCCAACAATTCAGTATTAAACATTTTTCTCTTCTTCTCAGCCAATGATGGCTGGCAACCCTAACTGGTGGACTACTCATCCACCATCTTTGATCCCTCCCCAGTATGTTCTTGGATCTTCTTCAATACCTTTCAATTCTTCCACACAAAACCCTGATCATGAGCCTCCTCCCTCGTTGAGCCAACTTCTTTTGTAAGCACTTTTTCTCTCTCTTTTTGTGCATGCCTTCTTCATCAATACACATCTTCCACTTTCTCTTTTCCACTGTTTCAAAAACTGTTCATTATACCGGCTACTGTTTTACCTTAATCACTGAGGTTTTTCTTCTTCTTTTTGCCTGTTTTGCAGCACTGGTTTACCGGGAGAGGAGGAAAGAGTGGCATTCAGTCATTTTCAATCGAAAAAGTTGGATGAATGGAATGAGCACATGCTTAATCCACCCCCCATAAATCCTATGGTCGATGTAATAAAGCAAGAGGTTTCCCAAAGTGGCAGCTTCTATCACCAAGGACATGATCAGGAATTTCAGGTTTCTGGAGCTCCTTGGTCACACATGGTGCCTGTTTCTTCTTCTCCTATGTCTAGTGTTGTTGCTAGCTTCAGTAGTAATAATTTATTGGATTTCACTTATAACAAGGAAGATCATAGGAAGAACCAACTACCAGATCACACATCCGAGGTAACACTCATGTTCTTATTTTATATATACTAATTTAAACATATGCATAGATTATATATATATATATATATATATAGCAATAATTTATTGTTCATGGTGTCTGTCTCTTGTTTTCTTCAAGTGTAATACCACAGCAAGCGCTGGAGTTTTCAAGAAGACTAAGTGTCAACCATCTTCAAGCCAACCACCTCTCAAGGTGATCTTTAACTACAAAGAGATAGAGTTACTGAGAAGTTGTTTTGTTTGTGTTGTCTCTCTCTATATGCATGATAGTTGAAAGAGAGAAAAACATGAAAATTCATGAACTAACAGTATCTCTTAATCAGGTGAGAAAGGAGAAGCTAGGTGATAGAATAACAGCCCTTCACCAGCTAGTTTCCCCATTCGGAAAGGTAATAAACAAAAGACTCCAATCAGTATAGGAACAGAAGAAACTCATGGCTAAATACAAAAACTATGAACCATAATTATTACAAGCGTCTTGTGTGTTTGGTTTTAGTGGTGATGAACAGAACCTTTATGATATATCACTCCAGCTATTGTCTTCCTCTTTACTTTCTCTTTCCCCATTTATCGTAATCTCATTTCTAACCTTAAAAGAGACACATGACCGGTGCTGTGGTTGTGGGGTGTGTGTGTGTTTCACTTTTGCAGACTGACACGGCTTCTGTCTTGTTAGAAGCCATTGGATACATAAGATTCCTTCAGGGTCAAATTGAGGTGATGTTTCTCCCTCATATTTTATACACACTGCAAGCTATATTGAGAGTTAGTCATAGAGCATGCATTTAAAGTGTCACAAATTTTAATGTTTCTCTCCATAACATTCTTTTGTTGTTTTTTCCTTTTCTTTTTCCTTCTTGCTTGCAGGCTCTCAGTTCTCCTTACTTGGGCAATGGATCAAAAAACATGAGGAATCCACAGTCTGTAAGTACCCACTTTTCAAAGTCTCTCTCTTTCTTGTTAACTCTAACAAACACATTTGAGTGGGACAAAAATACCTACTAAGGCATATAATTGAAGGGAAAGTTTCCTCTTTTCTTTATTTTCTTTTTAAGCAACAGGTACATGGAGAAAGAAATTCTGTATTTCCTGAGGACCCCGGTCAGGTATGCTTTATTGGATCCATCAATTCATTACAATCAAATTAGGAGGCTCTTTGTAATTATTACTTAATATTTAATCAGGGAAAAGCCACAAAAAAATAACAAGGTTTCTCAGCTTTTTATATCATCTTTTTAAAGCAAGTGAAAAGTATAATGCGACGCTGCATTTCCCATTTGAAGTCAAAAAGCTTGGAGAGAGAACTGATTTTCCTAATACTTTTTCTTCCCTCTTTTTATTTCCATCTAGCTGTTGAATGACAATGGCCTGAAAAGAAAGGGAGCTCCAAACCAGGTATTCTTTCTTTTTATGCAAACCCTTTTACCACGCTTATTATCTCTTTCGTTTACTCATCCTAATCATTATTCTCATTATCACAATTACCTGCATAATTATGCAGAACATGCATGCATGGCCAGCCAAAACTATTCACTCTGCATTAATTAATGATAATAACACATTATATTCATCATATTTCATTCATTACTCTCTTTTCATATAAAAAATTGATTACCATACATAATCATGTGTTTATCTATTTATTAATCATTAATCAGGATGCAAAAGATAAGCCAAAGGACTTGAGGAGTAGAGGGTTGTGCTTGGTTCCTGTGTCTTGTACCCAGCATGTTGGAAACGAAAACGGAGCTGATTACTGGGCACCGGCATATGGCAGTGGATTTTAACACATAAACATGGCAACAGCATCGAAGAAATTTCATTGTGGATGATATAACATCGTGAGCAGTCAATCTGTGATAATGAAAAAGGCTGATTGCTCACGATGCTATATAGTATTCATGATTTACCAAATTGAAAAATCTTATCCATTATATTATTATGTACTGTCCTTTCTAGCTAATCTAATTAGGTTAACTCAATAAGTTATTAATAAGTGCTGTCAAAACATCGATTAATCCATAATTTTAGTTTTCCTAAACATGCTTTTCTGAGGTAGCAATTATTGTTCCTGCTTTTGTTATCAATATTCATAAATTAACATATTCTGTCTATGTTTGTTT