Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_36938 LG11 30867071 30870986 PREDICTED: AP2-like ethylene-responsive transcription factor AIL1
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated
Cellular Component   located in   nucleus, nucleus
Molecular Function   enables   transcription cis-regulatory region binding, transcription cis-regulatory region binding, DNA-binding transcription factor activity, DNA-binding transcription factor activity, transcription cis-regulatory region binding, transcription cis-regulatory region binding
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
G/T 30867084 3_prime_UTR_variant
G/T 30867089 3_prime_UTR_variant
A/G 30867174 3_prime_UTR_variant
T/A 30867849 missense_variant p.Lys415Met
T/A 30867939 missense_variant p.Glu385Val
G/T 30868028 intron_variant
A/C 30868031 intron_variant
G/A 30868092 intron_variant
G/T 30868148 intron_variant
T/A 30868528 missense_variant&splice_region_variant p.Arg339Trp
T/A 30868708 intron_variant
A/G 30869198 intron_variant
A/T 30869224 intron_variant
A/T 30869227 intron_variant
C/T 30869482 intron_variant
T/A 30869552 missense_variant&splice_region_variant p.Arg254Trp
A/G 30869652 synonymous_variant p.Asn220Asn
A/G 30869754 synonymous_variant p.Thr186Thr
T/C 30870231 intron_variant
G/C 30870369 intron_variant
A/T 30870385 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_36938.1
MNNWLGFSLTPHLRIDEEFGRENQERGEEGEGGGGYHPRPSSHPHLSVMPLRSDGSLCVADSFSHSATPQEWRYDSAIGGGNSNEKGPKLEDFLGCYSNSPNKVFCQDSQHDQNQSQSNVSKINVNVAPNFCTNADIETGDCLTNPSSLLQSFHAYNDNPHALIPTNGMYKSWLAQTQFSDVKPSTEANGCNFQSLSLTMSPTVQNGVGAISSVQALDDNRKRAMAKSHAREPVPRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEEKAARAYDLAALKYWGPTTHINFPLSTYEKELEEMKHMTRQEFVANLRRKSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGTSAVTNFDISRYDVKRICSSSTLIAGDLAKRSPKKESPASVAADDINTSSSSVPSQPTSLAITDAEHSDELSNMMWNANNSDEQAHNESVNMNNVSESSQQVSPSNNKVGLNHESPPKCSVGLPNEFGVSGADYGHGYFTLEGPKYDDEDDGNTENDHMSSNRLGNMGLVNQVPMFALWNE*


CDS Sequence:
>Vu_36938.1
ATGAATAACTGGTTGGGATTCTCTCTCACTCCCCATTTGAGGATTGATGAAGAATTTGGGAGAGAAAACCAAGAGCGTGGAGAAGAAGGAGAAGGAGGAGGAGGGTATCATCCTCGTCCTTCTTCTCACCCTCACTTGTCTGTTATGCCTTTGCGCTCTGATGGCTCTCTCTGTGTTGCTGATTCCTTCAGTCACTCTGCCACTCCTCAAGAATGGAGGTATGATAGTGCAATAGGTGGAGGGAATTCCAATGAAAAAGGTCCAAAGCTTGAGGACTTTTTGGGCTGCTACTCAAACTCCCCCAATAAAGTCTTTTGTCAAGATTCTCAACATGACCAAAACCAAAGCCAGAGCAATGTTTCCAAAATCAATGTTAATGTGGCACCAAACTTTTGCACCAATGCTGATATTGAAACTGGGGATTGCCTCACAAACCCTTCTTCCTTGCTTCAATCTTTCCATGCATACAATGATAACCCACATGCCCTTATCCCGACCAATGGCATGTACAAGTCCTGGTTGGCGCAAACTCAGTTTTCTGATGTAAAGCCTTCAACTGAGGCAAATGGGTGTAATTTCCAATCACTGTCTCTCACTATGAGCCCCACTGTGCAAAATGGAGTGGGGGCAATTTCCTCTGTTCAAGCTCTTGATGACAATAGGAAACGGGCCATGGCTAAATCTCATGCTAGAGAACCAGTTCCTCGCAAATCCATTGACACTTTTGGGCAGAGAACCTCTCAATACCGTGGTGTTACAAGGCATAGATGGACTGGGAGATATGAGGCCCATTTGTGGGACAACAGTTGCAGAAAGGAAGGGCAGACAAGGAAAGGAAGGCAAGTCTACCTTGGTGGTTATGATAAGGAAGAAAAAGCAGCAAGGGCTTATGACTTAGCTGCACTCAAGTATTGGGGTCCAACAACTCACATAAATTTCCCTTTAAGCACTTATGAGAAGGAACTTGAAGAGATGAAGCACATGACCAGGCAAGAATTTGTCGCCAATTTAAGAAGGAAGAGCAGTGGATTTTCAAGAGGGGCATCTGTGTATAGAGGTGTCACAAGGCACCATCAACATGGAAGGTGGCAGGCCCGAATTGGAAGGGTTGCAGGAAACAAGGACTTGTATCTTGGTACATTTAGCACTCAAGAAGAAGCTGCCGAAGCATACGATATTGCAGCAATCAAGTTCAGAGGAACAAGTGCTGTGACCAACTTTGACATAAGTAGGTATGATGTGAAGAGAATCTGCTCAAGTTCCACACTCATTGCAGGAGATCTTGCAAAGCGGTCCCCCAAAAAAGAGTCACCAGCTTCTGTTGCTGCGGATGACATCAACACAAGCAGTTCTTCCGTGCCATCTCAGCCAACTTCTTTGGCAATAACCGATGCTGAACATTCTGATGAGTTGTCCAACATGATGTGGAATGCCAACAACAGCGATGAACAAGCACACAACGAGAGTGTTAACATGAACAACGTGAGTGAATCATCACAGCAAGTTTCTCCAAGCAACAACAAGGTTGGTTTGAACCATGAAAGTCCTCCCAAGTGTTCTGTGGGGCTACCGAACGAGTTTGGAGTGAGTGGAGCAGATTATGGACATGGGTACTTCACCCTGGAAGGACCAAAATATGATGATGAGGATGATGGGAACACTGAAAACGACCACATGAGCAGCAACAGGCTTGGAAACATGGGACTTGTTAATCAAGTTCCGATGTTTGCTTTGTGGAATGAATGA


Promoter Sequence:
>Vu_36938::LG11:30870986-30872986(-)
TCTATTTTAAAGAAAAACATTTGAGATATGCTGCACAGTGGGTGAAAAAAAACTCTCAATTATTTTTCTCCTAACTTTAATCTTAAATTATATTTTAATTATAATTATTGTTGAAAATTTGTCAAAAATATAATGTACACAACATTTACATATTATAAGTTTTAATTATAACATACTTTATATATGAAAAAAAAATGTCAATGTATGTTTATTTAATTTATTTACTTTAAAACATGAAGTTATAGCTGAATGATGATCGTAGTTATAACATATTCTCTAAAGAGAAAAAGTGAACATTCATTTACAAATTTTGTTAACTAATATACATTAACATAATTTTAATTATATAAAATAAACATACATAGCTGTATCTATATTACATTTGTTGAAGAGTATTGGAGGAAGAAGAGAGAAGGAAGGAACATTTTTTGTATTGGTGAAGATGGCGGTTCAACCGAACCGAACCACATGGAGGTGTAGGGTAATTGACATGAAGAGAAGGTGTTTGATTGTTGGTTGTTCTTGAGACTGGTTCGTCTGTGTCTTGAGACGTGGTTATTCCCCATTGTCTGCATGTTCTTCAGCAGCAGACCAACCTATGATGAATAACAACAACTTTACAAAATCCTTAATTTTAATTAATTTTTTTGTTTTACCCATTTGAACCATTTCCAAATCCAAATTACCATTAAGTCCCTCATCCTACCACTAGTCAAGTCATCAGGGTGTGAAATTACCAAAAAGGCCACGATAGAGGACAAGTTAAATTTGTTTTAGATGGTTTGGCAGTGAACCTGGACCAATTGCCATCACTGCCCCAATCCCAACCATAGCCTCCATGCAAATGCAAGTAGGTGCAGGTTTCCCTTATTTCAATATTATTTTAATTAATTTATTCACATTTATATAACAATCAATAATAATAATAATAATAATAATTCCATTTACAATAATTAGTTTTAAATTATTAAATTACACTATTAACGGAAAAATACGTAAAAAAAATGCTAAAAAAGTTAGACTTACATATTAGCCTCCTCTGGTAGACTTATTAATAAGTTAAAAGTATCCAAGTTCAAAAAATACATATAATGAAGTTTATTTAATCTTAATAAACAATTAACAACTTCCTTTTTTAATTTTTTATTCTTTTATTCTTTTAGACTTTTCACTTTTTCTTTAACCCTAATTATATGAAATAATTAAAATTTAGGTAAGAATAAAATATAATTATAGTGAGCATATATTTAATACTATATTAATCTTAAATAAAAGTTTTACACATAGATAGATAATTTTATTTAAACAAGAACATGAGTTGCACACAAGTAAACATGAATGTTCTTCCATGATTTATTAATATAACAATAAAATAAAATAATTTAATAAGCAAACCATTCTCTTTGTTTTTTTCTTTCAAAAATTATTCTCTCTTTTTTAAGATATTATCTTCTCTTTAATAATAATAATAATTTTAAACATATGATGTCATTAAGTATTCAGTTCACCGCTTATATCACTTGTGTCATCAATTATCTCTCTGATGCATGATTCGCTGTTCTGCATAATGTAACATCTTACTGCATCATCAAATTTGAACCGTTGATGAGGTTATCACATGTTACAGGAACACTGGAACTGAGTGGAATCCTCTCTGTGATAATAGTCGTGAAGATTTTGGCATCTCTTCAGTTTATTTATTTATTTTTAATTTTATATTTTATAGTATTATATATTATTTTGTCACACTGCTACATGCCGTGGCCACCTCTGCAGAAATCTGAGAAAGAAATGAAAGAGGTGGCACAGAACCCAACTTTTCATTACAAAACAGACACAGGGCTGAGAATATAAGACGAGAGAGAAGTTTGTCTAGAGTTCTCAAGTCTCAACACCTTCAATCCCACCTCAACAATATATCATAAAATAAACCAAAAATCAAAGTAATGATGTATATTATATATATATATATATAAACCCAACATACCCCCTTTAGAAGA


Gene Sequence:
>Vu_36938(-)
GACCCACAAGATATGAATCCCACATGATTATGACTATGATGCAGCTTCAAAGAGGGAAAAAAATGGAAAATTTCCAACCCCATCCCAACTTCCCAACCGTTACAAGCTTTGAAATTTGAGCTCAAAGTCCAACATTCCAAACTTGCATAGATAGATAGAGAGATACATACATGCTACAAGCAGTTCGAATTTTTGGGAGGAGAGAAAGATCTGTGTGGTGTAAGTTAGTGTAACTGGTGTAAGAAGGAAGTCTGTGCTCTTTGGGGGGATTGTTTTCTTGAGAAAAGAGGAAGCAGTGTGAAAAAACTGTGTTAATATGAATAACTGGTTGGGATTCTCTCTCACTCCCCATTTGAGGATTGATGAAGAATTTGGGAGAGAAAACCAAGAGCGTGGAGAAGAAGGAGAAGGAGGAGGAGGGTATCATCCTCGTCCTTCTTCTCACCCTCACTTGTCTGTTATGCCTTTGCGCTCTGATGGCTCTCTCTGTGTTGCTGATTCCTTCAGTCACTCTGCCACTCCTCAAGGTATTGCATGCCACACTACATCCTTTATTTGCACCCCTTCCCTTCTAGCTTATCTTATTTTGAACAGATGATAATTTTTTGTTTTTTCTCCAAGATGAGTAATAAATAACTAAACTTTCCTGCAACAAACTATTGTGATTCTCTACCACTATGAGTGATTCTTTGTTATTGAACGGGTAGAGTGTGTTCTGTTTGTGGATTCAAAGCTTTTGCATGTCGTCTAAAGCAATTTCTTTTGTGGTTTTTCTCTTGATTACTGCAAAAAGTTTTATATTTTGCTATGAATCAGTTCTCGGCTGCATTGATTTTTCTTTCGCCTATTTATGAATTAACAATGAAATTTGTGGGGCTGCTTGTAGAATGGAGGTATGATAGTGCAATAGGTGGAGGGAATTCCAATGAAAAAGGTCCAAAGCTTGAGGACTTTTTGGGCTGCTACTCAAACTCCCCCAATAAAGTCTTTTGTCAAGATTCTCAACATGACCAAAACCAAAGCCAGAGCAATGTTTCCAAAATCAATGTTAATGTGGCACCAAACTTTTGCACCAATGCTGATATTGAAACTGGGGATTGCCTCACAAACCCTTCTTCCTTGCTTCAATCTTTCCATGCATACAATGATAACCCACATGCCCTTATCCCGACCAATGGCATGTACAAGTCCTGGTTGGCGCAAACTCAGTTTTCTGATGTAAAGCCTTCAACTGAGGCAAATGGGTGTAATTTCCAATCACTGTCTCTCACTATGAGCCCCACTGTGCAAAATGGAGTGGGGGCAATTTCCTCTGTTCAAGCTCTTGATGACAATAGGAAACGGGCCATGGCTAAATCTCATGCTAGAGAACCAGTTCCTCGCAAATCCATTGACACTTTTGGGCAGAGAACCTCTCAATACCGTGGTGTTACAAGGTAGGGGCTATGGTTTTTTAGTGTTTATTTATTATCACACAGCATTATATTTTGTTTATTAAGATGATGTTTTTATCTTTTTTGTATTTGGAATTCATGGATTTTGGTAGGCATAGATGGACTGGGAGATATGAGGCCCATTTGTGGGACAACAGTTGCAGAAAGGAAGGGCAGACAAGGAAAGGAAGGCAAGGTGAGATAATGTGTTTTTTGGTTGTGGTTTTGGCTTATGGTGTTATTATTTTATATTAATTTGGTTTATGGTGATTGACCAAGGAAGATCATTTTCAAGACCAAAACAAGTGTTTTAGCCTTTTCCATTCTGTTCCTTTTTTTATTTACTTTCCAGTCTTGTTTTGAAAGAGAATATACTAACGGTCTGTTTCATGCACCGGTTGGATTCTTCTCCCTTTTTCATGGCTTCTTCAAATCTTCACTCAGTCTACCTTGGTGAGTGACACTCCTTCACACGCAATGGTTGTCTATATTTACTCCTTTACCATCTTTGTAAATCTTACCGATTACTATAACACGGAAACTGGTTAGATACGCTACTAGATATGAAGCATTGGAAAGTGTGCTTGGGTTCTGAAGATGATTTATCGGTTTTGGAAAATAATTATATCCCTGTATGTATGTATGTATCTATTATTATTAGGTGGTTATGATAAGGAAGAAAAAGCAGCAAGGGCTTATGACTTAGCTGCACTCAAGTATTGGGGTCCAACAACTCACATAAATTTCCCTGTAAGGCTTCTGAAACTTGTACAGTTTTCTACTTTGCAAAAGTCTTACCTTAGCTACTCTTGCAACTGTACAGAATAGAAACAAGGGAATTAAAAATTATTGAGAAAAGTCAAATATTTGCTATGTATTTAATTTTATGTGGCTTGAACCATTACATTGCAACTGTGATCACTCTACATGTCTACTGCTTCATAAATGCTCAGTTAAGCACTTATGAGAAGGAACTTGAAGAGATGAAGCACATGACCAGGCAAGAATTTGTCGCCAATTTAAGAAGGTACCATTAATTTTTTTCCATGTGATCTTAGTAAATTCTCTCACCCCCTTACATTCAACTGGAAGGAATTGTCCTTTTTGTTTCCCTCGGGCAGGAAGAGCAGTGGATTTTCAAGAGGGGCATCTGTGTATAGAGGTGTCACAAGGTATGGACTAAAGCAATGCGCTTTATCATTAATATGAATAAAGCTTTCCACCATGAATTATTTTCTGCAGTTTTCAGCTTTTGAATTAAGGTGGGCAATTATTAGCTAACATTTATCTTTTTCTCCTTGTATCATTTTCAGGCACCATCAACATGGAAGGTGGCAGGCCCGAATTGGAAGGGTTGCAGGAAACAAGGACTTGTATCTTGGTACATTTAGTAAGTTTTTAGACCCTTATCTCTCCTCGTGCCTTTCTTTCAAGCTTCCATTTTCCCTTTTCAATAATCATCGTTTCCTCCTTTATTCATTCATTCATGCATGATAATGTAACATAATTTAATAATGTCAGTTTTCACGTGACCATCTTTATCTTCTGCAACTCATTTCCCCATCCCTTGATTGAGGTTATTCTGACCAGTGATCCATAATGTAGGCACTCAAGAAGAAGCTGCCGAAGCATACGATATTGCAGCAATCAAGTTCAGAGGAACAAGTGCTGTGACCAACTTTGACATAAGTAGGTATGATGTGAAGAGAATCTGCTCAAGTTCCACACTCATTGCAGGAGATCTTGCAAAGCGGTCCCCCAAAAAAGAGTCACCAGCTTCTGTTGCTGCGGATGACATCAACACAAGCAGTTCTTCCGTGCCATCTCAGCCAACTTCTTTGGCAATAACCGATGCTGAACATTCTGATGAGTTGTCCAACATGATGTGGAATGCCAACAACAGCGATGAACAAGCACACAACGAGAGTGTTAACATGAACAACGTGAGTGAATCATCACAGCAAGTTTCTCCAAGCAACAACAAGGTTGGTTTGAACCATGAAAGTCCTCCCAAGTGTTCTGTGGGGCTACCGAACGAGTTTGGAGTGAGTGGAGCAGATTATGGACATGGGTACTTCACCCTGGAAGGACCAAAATATGATGATGAGGATGATGGGAACACTGAAAACGACCACATGAGCAGCAACAGGCTTGGAAACATGGGACTTGTTAATCAAGTTCCGATGTTTGCTTTGTGGAATGAATGAGAAACATTAGCTTAGGAAAGAAAACTAAGATGATGATGATGATGATGATGAGATGGCAGCATTATTGGATGATTATTGTAGTATTTGGTAAGGTAATTTGTTGTTGTGTTGAAAAGAAGGGTATGTCAGTAGTGGTGATTCCTTATGTGTTTTCTGTTGTTGGTAGGTAGGGTACGATACTAACTTGCAAAACATTATCCACTTTGGTTAACGAGAAAAATAGAACAGAATGATGCATGAAAATCAATGATGAGAATCGTACCAAAATCTTGAAAT