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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_36842 LG11 29768976 29772084 PREDICTED: ethylene-responsive transcription factor RAP2-12-like isoform X2
Map

Annotations  
category   relationship type   keyword
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
No SNPs found.

Sequence Details:

Protein Sequence:
>Vu_36842.1
MCGGAIISDFIPAGPAGRSRRVTPEILWPNLRKRFSKPLLDDDFEAGFREFKDDSEIEDDDDEDEEDSLMVVGVKKSVGFSRPNKTSKSLSRGSTTVKSGESKGQIEKCAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFSTAEEAARAYDAEARRIRGKKAKVNFPDEPSAVSSKRLKVIPEESLSSVQPKMNHLFNFGDNLEDYYSPVDQVEQKPLVNHSEHSSNSFDYSDLGWGEQVPRTPEISSILSAPLEGESQIQKKDSEDMMPVQDDSAKTLSEELADIESQLKFFEAPLFDGSWGDASLASLLGSDATQDAGNPLNLWSFDDLPSMAGVF*

>Vu_36842.2
MCGGAIISDFIPAGPAGRSRRVTPEILWPNLRKRFSKPLLDDDFEAGFREFKDDSEIEDDDDEDEEDSLMVVGVKKSVGFSRPNKTSKSLSRGSTTVKSGESKGQIEKCAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFSTAEEAARAYDAEARRIRGKKAKVNFPDEPSAVSSKRLKVIPEESLSSVQPKMNHLFNFGDNLEDYYSPVDQVEQKPLVNQYVNPGPFTGNCVQLSPVTQSADVTAYFSSEHSSNSFDYSDLGWGEQVPRTPEISSILSAPLEGESQIQKKDSEDMMPVQDDSAKTLSEELADIESQLKFFEAPLFDGSWGDASLASLLGSDATQDAGNPLNLWSFDDLPSMAGVF*

>Vu_36842.3
MCGGAIISDFIPAGPAGRSRRVTPEILWPNLRKRFSKPLLDDDFEAGFREFKDDSEIEDDDDEDEEDSLMVVGVKKSVGFSRPNKTSKSLSRGSTTVKSGESKGQIEKCAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFSTAEEAARAYDAEARRIRGKKAKVNFPDEPSAVSSKRLKVIPEESLSSVQPKMNHLFNFGDNLEDYYSPVDQVEQKPLVNQYVNPGPFTGNCVQLSPVTQSADVTAYFSSEHSSNSFDYSDLGWGEQVPRTPEISSILSAPLEGESQIQKKDSEDMMPVQDDSAKTLSEELADIESQLKFFEAPLFDGSWGDASLASLLGSDATQDAGNPLNLWSFDDLPSMAGVF*


CDS Sequence:
>Vu_36842.1
ATGTGTGGAGGTGCGATTATCTCCGACTTCATTCCGGCGGGGCCCGCCGGCCGGTCCCGACGCGTGACCCCCGAAATCCTGTGGCCGAATTTGAGGAAGCGGTTCTCGAAGCCGCTGCTGGACGATGATTTCGAGGCGGGGTTCAGGGAATTCAAGGATGACTCTGAAATCGAGGATGATGATGATGAGGATGAAGAGGACAGTTTGATGGTGGTTGGTGTGAAGAAGTCCGTTGGCTTTTCTCGCCCCAACAAGACCTCTAAGTCTCTCTCTCGTGGATCAACAACTGTAAAATCTGGGGAATCAAAAGGGCAAATTGAGAAGTGTGCCAAGAGAAAGAGGAAGAACCAATATAGAGGAATTCGTCAGCGTCCATGGGGAAAGTGGGCTGCTGAGATCCGTGACCCAAGAAAGGGGGTTCGTGTTTGGCTTGGAACTTTCAGCACTGCTGAAGAAGCTGCAAGAGCTTATGATGCTGAGGCAAGGAGGATCCGTGGCAAGAAAGCCAAGGTGAATTTCCCTGATGAGCCTTCAGCTGTTTCTTCAAAACGCCTCAAGGTGATTCCAGAGGAAAGCCTGAGCTCTGTGCAGCCAAAAATGAACCACTTGTTCAACTTTGGTGACAATCTGGAGGACTACTACAGCCCTGTGGATCAGGTGGAACAGAAGCCATTGGTTAACCATTCTGAGCATTCGAGCAATTCATTTGATTACTCTGATCTTGGATGGGGTGAACAAGTTCCAAGGACCCCTGAAATCTCCTCCATTCTTTCTGCTCCTCTGGAGGGTGAATCTCAGATTCAGAAGAAAGACAGTGAAGACATGATGCCTGTGCAAGATGATTCTGCAAAGACACTTTCTGAGGAGCTTGCAGACATAGAATCCCAGCTGAAGTTCTTCGAGGCCCCTTTGTTTGATGGAAGCTGGGGTGATGCTTCATTGGCTTCTCTGCTAGGCAGTGATGCAACTCAGGATGCTGGAAACCCTTTGAACCTTTGGAGCTTCGACGACCTGCCATCAATGGCAGGCGTTTTCTGA

>Vu_36842.2
ATGTGTGGAGGTGCGATTATCTCCGACTTCATTCCGGCGGGGCCCGCCGGCCGGTCCCGACGCGTGACCCCCGAAATCCTGTGGCCGAATTTGAGGAAGCGGTTCTCGAAGCCGCTGCTGGACGATGATTTCGAGGCGGGGTTCAGGGAATTCAAGGATGACTCTGAAATCGAGGATGATGATGATGAGGATGAAGAGGACAGTTTGATGGTGGTTGGTGTGAAGAAGTCCGTTGGCTTTTCTCGCCCCAACAAGACCTCTAAGTCTCTCTCTCGTGGATCAACAACTGTAAAATCTGGGGAATCAAAAGGGCAAATTGAGAAGTGTGCCAAGAGAAAGAGGAAGAACCAATATAGAGGAATTCGTCAGCGTCCATGGGGAAAGTGGGCTGCTGAGATCCGTGACCCAAGAAAGGGGGTTCGTGTTTGGCTTGGAACTTTCAGCACTGCTGAAGAAGCTGCAAGAGCTTATGATGCTGAGGCAAGGAGGATCCGTGGCAAGAAAGCCAAGGTGAATTTCCCTGATGAGCCTTCAGCTGTTTCTTCAAAACGCCTCAAGGTGATTCCAGAGGAAAGCCTGAGCTCTGTGCAGCCAAAAATGAACCACTTGTTCAACTTTGGTGACAATCTGGAGGACTACTACAGCCCTGTGGATCAGGTGGAACAGAAGCCATTGGTTAACCAGTATGTGAACCCTGGTCCATTCACTGGAAACTGTGTTCAGCTCTCACCAGTTACTCAATCTGCTGATGTTACTGCTTATTTCAGTTCTGAGCATTCGAGCAATTCATTTGATTACTCTGATCTTGGATGGGGTGAACAAGTTCCAAGGACCCCTGAAATCTCCTCCATTCTTTCTGCTCCTCTGGAGGGTGAATCTCAGATTCAGAAGAAAGACAGTGAAGACATGATGCCTGTGCAAGATGATTCTGCAAAGACACTTTCTGAGGAGCTTGCAGACATAGAATCCCAGCTGAAGTTCTTCGAGGCCCCTTTGTTTGATGGAAGCTGGGGTGATGCTTCATTGGCTTCTCTGCTAGGCAGTGATGCAACTCAGGATGCTGGAAACCCTTTGAACCTTTGGAGCTTCGACGACCTGCCATCAATGGCAGGCGTTTTCTGA

>Vu_36842.3
ATGTGTGGAGGTGCGATTATCTCCGACTTCATTCCGGCGGGGCCCGCCGGCCGGTCCCGACGCGTGACCCCCGAAATCCTGTGGCCGAATTTGAGGAAGCGGTTCTCGAAGCCGCTGCTGGACGATGATTTCGAGGCGGGGTTCAGGGAATTCAAGGATGACTCTGAAATCGAGGATGATGATGATGAGGATGAAGAGGACAGTTTGATGGTGGTTGGTGTGAAGAAGTCCGTTGGCTTTTCTCGCCCCAACAAGACCTCTAAGTCTCTCTCTCGTGGATCAACAACTGTAAAATCTGGGGAATCAAAAGGGCAAATTGAGAAGTGTGCCAAGAGAAAGAGGAAGAACCAATATAGAGGAATTCGTCAGCGTCCATGGGGAAAGTGGGCTGCTGAGATCCGTGACCCAAGAAAGGGGGTTCGTGTTTGGCTTGGAACTTTCAGCACTGCTGAAGAAGCTGCAAGAGCTTATGATGCTGAGGCAAGGAGGATCCGTGGCAAGAAAGCCAAGGTGAATTTCCCTGATGAGCCTTCAGCTGTTTCTTCAAAACGCCTCAAGGTGATTCCAGAGGAAAGCCTGAGCTCTGTGCAGCCAAAAATGAACCACTTGTTCAACTTTGGTGACAATCTGGAGGACTACTACAGCCCTGTGGATCAGGTGGAACAGAAGCCATTGGTTAACCAGTATGTGAACCCTGGTCCATTCACTGGAAACTGTGTTCAGCTCTCACCAGTTACTCAATCTGCTGATGTTACTGCTTATTTCAGTTCTGAGCATTCGAGCAATTCATTTGATTACTCTGATCTTGGATGGGGTGAACAAGTTCCAAGGACCCCTGAAATCTCCTCCATTCTTTCTGCTCCTCTGGAGGGTGAATCTCAGATTCAGAAGAAAGACAGTGAAGACATGATGCCTGTGCAAGATGATTCTGCAAAGACACTTTCTGAGGAGCTTGCAGACATAGAATCCCAGCTGAAGTTCTTCGAGGCCCCTTTGTTTGATGGAAGCTGGGGTGATGCTTCATTGGCTTCTCTGCTAGGCAGTGATGCAACTCAGGATGCTGGAAACCCTTTGAACCTTTGGAGCTTCGACGACCTGCCATCAATGGCAGGCGTTTTCTGA


Promoter Sequence:
>Vu_36842::LG11:29766976-29768976(+)
TTGTAGATTCATCTCTTAGATGTGTATTATATATAATGACCATGTACAATTATTAGTTTTTAAACATAACACAAACAAAATGACAAATATCTAAATATACTATAAATATTCATAAATTAGTATCACCAAATATAATAATTATTCGTCAGTAATTGTGATCTTAACTCAATTCATATCAAATATATGTTTCATTAATAACTATTACCATACTCATTACTACAACATCAAAATCAATCACATTAGTTGAAGAATTGAACTAAATAATTACTTAGATTATAAAAGTAAAGATAGGTTGTTTTAGTGACTTATTTTAAAACATAAAAATATGTTATTAAAACTTCCTTGCTCAATTTGTATGGTTTTGCTTAAGTAATAACTTGTATTTTGAATGTCTTGTCAAAACTTGAATAATAATCGAAATTAAAACAAAACTTGTTCTTAGATTTTTCTTTGATTAGCTACTCAAATTATCATATGTGACATGCAATATATGTTATCGTTTGAGTGGAGAAATAATATTTAAACAATATATAATTGTGTAACTTAAGAAAACAAAAATTAAAGATATATCCAAACATATAAAACTTTATTATTTGAGAGATCAATGATAATTTTTTGTATTCAAGATTGAAACCCTTATACTTAAGTGTTGCTCGAGTGAAAACTCGATGCTCAAGTGAAATATAAAAGATAGTAAATTTGTATGAAGTTCCAATTAAGCAAAACTAATTTTGAATAATTCAATCGTCTTAAAAAGCTTAAAATACATTTTAATAGTTTGAAAAAAACTACAAATTACCCAAAACAGTGTTAACTATATTCATTTTATCGTTCTAAACCACTGTCAAATTAAAAAAATCAACATAAATATCAATTTCATTTCAATACACAACTCATCAATCATTATTGTCAGAAAAAAATTTAAAAAGATTAAAAACAAAGGACAATAAAACTGAGACCCAATGACTTGAGAAGGAAAAGTATTACAAGTTTCTATTTTTAAATATTTTTACATGCATATTCGGATATTGTTCTATTTGAGACATTAATGAACAACTTTTTAAGGAAAGTTTCAGTTGTAGTTGATGAAGTCTCTTCTTGTTTATTTTTGTATCCTTTTAATGATGTATATACGTTTTTTTGTTTTGTTTTAACTTAAAGCACAATCTACAATTTTAAACCATGTTATTATTACAAAGATATGTATAATTATCAATGACCAACTGAAAGTATCTAAAAAATTCACAAGATTGTCAACGGAGAATTAAAGAATAATACTATTTCTAATCAATTTACTTTCATAAAAATGTACATTTTATGGTTTACAGCCTTGTAATAAAAACACTAATTAAAAACTATCTGGTCGTTGAAATTTAAATATCATAAATAACTATGTTCAAATATTATTTCATTTTGTCATCACGAAGGTCTACGTGGTCATAAACATTTACAAGTACTATTATTCATCTTCACTTTCAACTTCAATTTCTTTTTTATTAATTTTAATATGATTAGCTATTTTGTATTTTCAATGAGTGAAATTTGTGACAGCATAAGTTGCCTTAAACCTAAAATCCACACAAAATAATATCTCTTCTATATCACGAGAAATCTCTACGTCACTCACCAAACATTTTCTTATGCCAAGCCATGCATTGTACACACGTAACTGCTAATTATTCACAACAAAGAAAAGTATCCAACAACATATAATCATGCGTAATGTATTTATGTTTTATACTTTACAATTTTCTTATTTTCATCGTTGTCTAATGTAATAAACTGCAAAAGTAACTTGTGTTTGGCACGTGTGTGATCTACTCGCATGATCAATGCTGACAGCACTGCCAGTAAAAACATCAACCTTACCGTTTACCTTTCCAAACAAGAAACCTCACCGGTTGCCACTGTCAGGGGTAAAACGGTAAGACTGCCCTCATCTCAGAAAAAAAAAAATCATTTTTTGTGTATATATACTACTATACAGCTCCCACCTCCCA


Gene Sequence:
>Vu_36842(+)
ACCAAACTCAATTATACAAAACCCTGAAGAAAGACACAACAACCATTGTTACTTTCCATTGATTGAGCTAAAGCTTTGGCTTTTCTCGGATAATTTTTCATTGGGTACAAGAAAGTCTCTAACTTTCACCGAAAGAGCAAGGATCTGAGATGTGTGGAGGTGCGATTATCTCCGACTTCATTCCGGCGGGGCCCGCCGGCCGGTCCCGACGCGTGACCCCCGAAATCCTGTGGCCGAATTTGAGGAAGCGGTTCTCGAAGCCGCTGCTGGACGATGATTTCGAGGCGGGGTTCAGGGAATTCAAGGATGACTCTGAAATCGAGGATGATGATGATGAGGATGAAGAGGACAGTTTGATGGTGGTTGGTGTGAAGAAGTCCGTTGGCTTTTCTCGCCCCAACAAGACCTCTAAGTCTCTCTCTCGTGGTAACTTTACTTTCTGATGATCATCCTTTGAGTTTTAGTTGTGTTTTTCTGTTGTTTTGTTTTGGTTTTTTAATCTGGAGTTGTGGTTTCGGTTTTACATGCATTCCTTGCTTCGACGCTTTGGTTTCTTATTGTTGTTGAGTGATGGAAAAGTTATTACTTTTTCATGCTTGTGCCGTTTTTTAAACAAAAAACTGTCGAAGATATTGACTTTTTTCTTACAGAGAAATGCTTTTGATGTAAGGTTTTCTGGGATGTTAATTTTTGTTTTGTTTTTATTCTTCTGGAAGTTCTGTTTTTGGAGTTGGCACGGCAGAGGGGATTTTATTGAAATCGTTGTGGATCTTGTGAGCGTTGAAGAGATTTATTTGCTATATGAAATTTATTTGTAAAAATAAATGGAACATCTTTTGTGATCATTTTGGGGCTTGTTATGTCTATGCACTGTGGATGAAATTTGGGGATTACATTAATTGACTACAGAGCCGTATGTATCGGGGCATGATTTTGTAGATCCAATTAAAGTTGGTTTCGGTTGCTTGTTTAATCATCTCAAGCAAAGTTGCAATTTCTTTAGTACTCCTGATGATTTGTGGTGAAGTTGAATTTTGTACTCCACCTTATTTCAAAACTTTTATGAGTTGGGTATTTATTTGTCTTTTAGGACTTTTTTCTTCTGGATATAAAAAATATAGGAACAGTGTTCTTTCCATTGGTTTTGGCTGGGTGTTAGAAGCATAGCTCACGATCATTGACTGGATCAGTTCAGGAATTCAGTTGCATGTGCCTTTGGGATTGATTTTTGTGTTTGAAAATTATGCTTTAAATTCAACTATGCTTCTTTGTGGGCACAATCAACAAGACAGGGTTGACCCTGTTCATTAATTGTTCATTAGTTGATCCAATTTTGGCATTTCGTTTAGTATTGCTTTGGTTATTGGTCTGCTAGGTGGTTTACTGTTTGTGGGCTAAACAATGTTTGCTTGATTTAGATTTCTCGCTGGTTAATCCATGAAATTGAAACGATTGTTACATTGTTATTACAAGCTGTGAATGTTTCTTCATAATACTGATTTTCCTTTTACCTTGTGGTGTTGTCTGATAGATCTGAATTGTTTTGTTTATCTGTGTTTTTGGTATGTGATAAATTATTTTAATGATACTCCATATATATTGTTTCTACGCGATTATTTATGTTATTTCTTATTTTTATTGAAGGATCAACAACTGTAAAATCTGGGGAATCAAAAGGGCAAATTGAGAAGTGTGCCAAGAGAAAGAGGAAGAACCAATATAGAGGAATTCGTCAGCGTCCATGGGGAAAGTGGGCTGCTGAGATCCGTGACCCAAGAAAGGGGGTTCGTGTTTGGCTTGGAACTTTCAGCACTGCTGAAGAAGCTGCAAGAGCTTATGATGCTGAGGCAAGGAGGATCCGTGGCAAGAAAGCCAAGGTGAATTTCCCTGATGAGCCTTCAGCTGTTTCTTCAAAACGCCTCAAGGTGATTCCAGAGGAAAGCCTGAGCTCTGTGCAGCCAAAAATGAACCACTTGTTCAACTTTGGTGACAATCTGGAGGACTACTACAGCCCTGTGGATCAGGTGGAACAGAAGCCATTGGTTAACCAGTATGTGAACCCTGGTCCATTCACTGGAAACTGTGTTCAGCTCTCACCAGTTACTCAATCTGCTGATGTTACTGCTTATTTCAGTTCTGAGCATTCGAGCAATTCATTTGATTACTCTGATCTTGGATGGGGTGAACAAGTTCCAAGGACCCCTGAAATCTCCTCCATTCTTTCTGCTCCTCTGGAGGGTGAATCTCAGATTCAGAAGAAAGACAGTGAAGACATGATGCCTGTGCAAGATGATTCTGCAAAGACACTTTCTGAGGAGCTTGCAGACATAGAATCCCAGCTGAAGTTCTTCGAGGCCCCTTTGTTTGATGGAAGCTGGGGTGATGCTTCATTGGCTTCTCTGCTAGGCAGTGATGCAACTCAGGATGCTGGAAACCCTTTGAACCTTTGGAGCTTCGACGACCTGCCATCAATGGCAGGCGTTTTCTGAGCAACATTGTATCTCCCTTTATGTAAATAAAGCTACAAGGTAGTTTTTTTCGTTCAGTTTCTGCTCCCCTCTTACTGAAAACCATCCCTGCATAGATTACTATTACTATTACTATTATTATTATTGTTCTTGATTGTGTATTGCTTTCAGGAACGGTGGTCGTGGTGTTGATGATGGAGTCACAGGAAGAAGTAACATGCTTAAGGACACGTGTCGTTTATTCTCTTGTAGCTAATGCAGTATAGGTCTATATAGGTTTTTTTAGGTGTCCTTTGTGAACTCAAAGACCTCCTTTTCAGGGGATTTTCTGCTTGATGTCCATAAGGATTTATATTATATATGGCCTGGGATACACTCTTGACTGCTGATATAGTTATTATATTATATTAACTTGGTTGTTTTCATTGTGTAAATTTCATTATGATTTCATACCACCATTTATTCAATGCTTTGTTTGGTTCATGATTTCTTTTTTGTTTCACTTTTCTGGTTTGCCTACATTTTTGGATAAAATTTTTAGCTATTTTTATGTGTGGAAAGCCTTTTTGCTCTAAACCTATGTCTTGCATTGTTTGTTCTGTTGGGGAGTGTTATTATGCATTGAAAATTTAGGTGTGATC

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