Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_36784 LG11 29159181 29161110 PREDICTED: NAC domain-containing protein 90-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/T 29159230 missense_variant p.Ala339Asp
G/T 29159239 missense_variant p.Pro336Gln
T/C 29159242 missense_variant p.Tyr335Cys
A/G 29159530 synonymous_variant p.Phe266Phe
T/A 29160142 upstream_gene_variant
T/C 29160179 upstream_gene_variant
T/G 29160188 upstream_gene_variant
G/T 29160221 upstream_gene_variant
A/T 29160460 upstream_gene_variant
C/A 29160468 upstream_gene_variant
G/T 29160566 upstream_gene_variant
A/T 29160572 upstream_gene_variant
A/T 29160875 upstream_gene_variant
G/T 29160882 upstream_gene_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_36784.1
MGKIVGVGFRPTEQELVDFYLKHKLLADDSRVDVIPVIDLCQVEPSDVPGMLAKSPIRFGNPDWFFFSPVDFKYANSKRVNRKTEKGFWKATGKDRDIRSWNNNTLIATKKTLVYYTGSVSCGVKSIWVIHEYHAVTFHESKRYFVLCRLMRKSGKTTEGGTDPVVCGEEEPSELNVSDYENQATSKEIPSGGKVTGAEPIFQANSQSETYVSQIPQSSTEEASSFPDYPSNNACFRNENCFMQDEFLNRIIADENLDIDEDNIYTFVNNSIRKDTNIMDSSSIYNEYSNNEEYHSSKRFKLSEDVIDDASSNQETKKSMILDNFCGMESSSCDSYPYSALEINHTETSSSQSIS*


CDS Sequence:
>Vu_36784.1
ATGGGTAAAATTGTTGGTGTCGGTTTCCGTCCTACGGAACAAGAGCTCGTCGATTTCTACCTCAAGCACAAGTTGCTGGCTGATGATTCCCGTGTCGACGTTATCCCTGTCATTGATCTCTGCCAAGTGGAACCTTCCGATGTACCAGGGATGCTTGCAAAATCACCGATACGATTTGGTAACCCAGACTGGTTTTTCTTTAGTCCGGTCGATTTCAAGTATGCAAACAGTAAAAGGGTTAACAGGAAAACCGAGAAAGGATTCTGGAAAGCCACTGGAAAAGACCGTGATATTAGGAGCTGGAACAACAACACACTGATTGCCACAAAGAAGACTCTTGTATACTACACAGGAAGTGTTTCCTGTGGTGTCAAGTCCATCTGGGTTATTCACGAATATCACGCTGTTACCTTTCATGAAAGCAAGAGGTATTTTGTTTTATGCCGCTTGATGAGGAAATCTGGGAAAACCACTGAAGGGGGAACCGATCCAGTAGTCTGTGGTGAAGAGGAGCCCAGTGAACTCAATGTTTCTGACTACGAAAATCAGGCAACATCTAAAGAAATTCCATCTGGAGGTAAGGTTACAGGAGCGGAACCAATCTTTCAGGCTAACTCTCAGTCAGAGACATACGTCTCCCAAATACCACAGTCTTCAACAGAAGAAGCATCATCTTTTCCAGATTATCCATCAAACAATGCCTGTTTTAGAAATGAAAATTGTTTTATGCAAGATGAGTTTCTAAATCGAATTATAGCTGACGAAAATTTAGATATTGACGAAGATAATATCTATACTTTTGTCAATAATTCCATCCGGAAGGATACGAATATTATGGATAGTTCTTCTATTTATAATGAATATTCTAATAACGAGGAATACCATTCATCAAAAAGATTTAAATTATCAGAAGATGTTATTGATGATGCATCATCAAATCAAGAAACAAAGAAGAGTATGATTTTAGATAATTTTTGTGGAATGGAATCATCTTCTTGTGACTCATATCCATATTCAGCTTTAGAGATTAATCATACCGAAACTTCTAGTTCTCAGTCTATTTCATAA


Promoter Sequence:
>Vu_36784::LG11:29161110-29163110(-)
AACTATTTTTTTAACTTTAATAATAAAGATTAAGTATGATTTAATAATTTTTAGAATTAAATATGTTTTTAGTTTTTTTTAATCTCTGTTAGTACATTTTTATCTTACTATAATTTTTCGTTTTTAAAATTCAACACCGTTAACTACCGTTAACTTTAATGTGAAGTGACTAACGTGACACATCACTTTTTTTTTTTTTTATTGAAACGTGGCAATTTGTTCAGGCCTCTCTCTTATTCATTTCAATCATCCTTTTCAGAGAAGGGAAAATAAGGTTTCTCCTGCATGCGGAAGAGGAAGAAACTCATTCCGCGGCGCTACGAAAAAGCTTTACGAAAAAGCTTTACGAAAAAGCTTTGCCCGGATCGCACCTCCACAGTACCGTCGCCTTCTCCGAACAGTCAGAATCACTAGCTCCTCTAAAACTCTAATTCCAAATAGAAAACTACAGATAGAGAATAAGCTTTCGTGTATCAAATAAATCAAATGTTTCTTAAGAGTGCAAAAGAAACACACAGAAAATAAACAGCATATCTGCAGCTTGTTCTTTTTGCCAGCTGATAACAGGATAACTTTCCCATCCACTATATCTGCAGCTTCAATCCTTTTACCTTCACTATCCACTATGTTATTATTTAAGTAAAGCTCCCTTGCTTCAACAACCTCCTTGCCGCAGGCTAACTCTCGAACAAACCAGAAGAGACCGAAAGATCCACCAATGACTGATTCAAAACCGCTTCATAAGCCAAAAACTTTGGAGACAACCAAATAGCACCATCTTCAGACTTTCCAAACTTGGTACCGTCACTCTTCAAAAGAAGAGGGAATGTGAAGCCATATGCATCTTTCACGAGTAATATCTTCCTAATCAATTCAGTCCTAGTAGTTATATTACCCCACTGATCACTACCCCCAATCTGAACATACAACATTTCTCTCAGGCATTGTATCGAACAGGTTTCGTGCATCTCTTGTAGCATCACCGAACCAAACACGGTGGTGCACCTCCTCCCAGCCCAAGGCGTCGTCAGCAACACCGCACGTCGCCAGGGTCATCGCCGGCCATCGCGAAAGCTCTCCTATCCTGGCTTCTCTTCGCGCGCGAGAGGGAGACACCCTTCTCCTCTGTGACGCATCCTCACAGTCACTAGCAAGGTCAGCCACCACCGACGCCTCCAGCGGAGGAAATCCCGCCCTTCACGGCGACTCAACCTCTGAACCACAAACCCTAACAGCTTGGCGCATCCTCAATCGTTAGTGGAAGATGCTGCCGGCAACTCCCCAAAGACGCATGACCTTTGCTTCCCTTCCTCTCAACGGCGACTCGATGGTCATCACCTCCGTTGCTGACGATGGGTTCTCCTTCCCTTTATTCTCTATTTTGATTGGATCGGTATGAGTTTGTAAGGTATGCGTGCTAATGACCTCTTTGTGGTTGCAAATGTAGAAGATGGTGCAAGGTATGGAAACAAGGATTAAACGGTGTGATGGAGATTAAAATAACATAGGTTTGAGATGAACAAGAGAGAGAACTCTCACGGCCCTCAAGAGATAGCCACGTTTCAAAAAAGAAAAATAGAACAGTGATCTGGCAGTTAGTCACGTAAGATTAAAGTTAACGACGTTAATTTTCGACGGAAAATTATAATTTTCTTAAAAACGATAAAGGGTACCATAGTTTCAAATAGTTTAAAAATGGGAGGAAAAAGAAATTCAACCCTAATTTTTATTACACATGGTAGCGTAAGAGATCTATGCCAACAATATCCAATCATCTTTTTTTCTTTGTTTTTGTTTTTATTTTTTGTATTTTTCTATGATAACTTGTTAGCTAAGGAGTCAATGTGTTTGCAATATAAAAACGAGGAGCCAAAAAGCCACAACATAACATAAATTCTCCTTCATCTCTGTGTGATCGATCTCCTCTTCCATTCGTATTTTCTTTCTTTTCGATGTCTCATTCAACCTACAAACACAGATTTCAGTGTTCACCAAAATCA


Gene Sequence:
>Vu_36784(-)
ATGGGTAAAATTGTTGGTGTCGGTTTCCGTCCTACGGAACAAGAGCTCGTCGATTTCTACCTCAAGCACAAGTTGCTGGCTGATGATTCCCGTGTCGACGTTATCCCTGTCATTGATCTCTGCCAAGTGGAACCTTCCGATGTACCAGGTAATCTAAAAATCGAAGTACTGAACATCCCTTTTGTCATCTTTATTCTTCTACTAATCTTTATGTCATTGTTGTGTGATCCTTTTATTGTTTCGAACAGGGATGCTTGCAAAATCACCGATACGATTTGGTAACCCAGACTGGTTTTTCTTTAGTCCGGTCGATTTCAAGTATGCAAACAGTAAAAGGGTTAACAGGAAAACCGAGAAAGGATTCTGGAAAGCCACTGGAAAAGACCGTGATATTAGGAGCTGGAACAACAACACACTGATTGCCACAAAGAAGACTCTTGTATACTACACAGGAAGTGTTTCCTGTGGTGTCAAGTCCATCTGGGTTATTCACGAATATCACGCTGTTACCTTTCATGAAAGCAAGGTTTGTTTTTCTTCTTCTCATGAAATTTTGACACTCTTTGGAAATCATCTTTCTACTAGATTATTATGTCTCTAAATTGTATAATTTTTTAGGTTTAGGTAATTGTTCTGGCTTTAGAAGGTTGTTGTTGTTGTTGGATTCTTTGCTTCAATCCCATGTTTTTTGTTTCACTCTAATCATCGCCCAATTTTCGTTACTTGTTCTTTCTTAGAGACAAATGGGACCTGGTAGAGCTTATTTTTTCTTGTAAAATTGACTTATGACCTTTCTTTCTGCTTAACTTAGTTAAGTGAGTTTTATTTGGAAGCATATCAAAAAAAGATATTTTTAGTTTATTCCAGTGGGAACCTGCATATGGATGAGCTCTCTTAAATGCCTGCCTATAAGAGTTTAATTAAATCTTCTATCTAAGCGTGCTCAAAATTCATCACCAGTTTTCATCAAGGACTGTCAATTTCTTCTGTATAACCATAGCCTGATTTTTATTGACTCTTTGTTTTGTGTGAACTCTATCAAATAAATGCTGATTGTGCTCAAAATTTTGCAGAGGTATTTTGTTTTATGCCGCTTGATGAGGAAATCTGGGAAAACCACTGAAGGGGGAACCGATCCAGTAGTCTGTGGTGAAGAGGAGCCCAGTGAACTCAATGTTTCTGACTACGAAAATCAGGCAACATCTAAAGAAATTCCATCTGTAAGCTGAATCATCCGTGATGGACATATTTACACTCTGTCATGTGAAACATGCTGAGAACTGATAGTTGTTTTTTACACATTTTTTCAGGGAGCTAAGGTTACTGATAGTTGTTTTTTACACATTTTTTCAGGGAGGTAAGGTTACAGGAGCGGAACCAATCTTTCAGGCTAACTCTCAGTCAGAGACATACGTCTCCCAAATACCACAGTCTTCAACAGAAGAAGCATCATCTTTTCCAGATTATCCATCAAACAATGCCTGTTTTAGAAATGAAAATTGTTTTATGCAAGATGAGTTTCTAAATCGAATTATAGCTGACGAAAATTTAGATATTGACGAAGATAATATCTATACTTTTGTCAATAATTCCATCCGGAAGGTAAATTTTAATATTATTTATATTTATCTTAAGCACTTTAAAAATTGAATTAATCTGATATTTTCATTTGATATCATTACAGGATACGAATATTATGGATAGTTCTTCTATTTATAATGAATATTCTAATAACGAGGAATACCATTCATCAAAAAGATTTAAATTATCAGAAGATGTTATTGATGATGCATCATCAAATCAAGAAACAAAGAAGAGTATGATTTTAGATAATTTTTGTGGAATGGAATCATCTTCTTGTGACTCATATCCATATTCAGCTTTAGAGATTAATCATACCGAAACTTCTAGTTCTCAGTCTATTTCATAA