Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_36773 LG11 29012203 29014079 PREDICTED: B3 domain-containing transcription factor NGA1 isoform X1
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/T 29012499 missense_variant p.Ser68Ile
A/G 29012860 synonymous_variant p.Lys188Lys
C/A 29012869 synonymous_variant p.Ala191Ala
C/T 29012947 synonymous_variant p.Pro217Pro
C/T 29013028 synonymous_variant p.Ile244Ile
A/C 29013029 synonymous_variant p.Arg245Arg
T/C 29013130 synonymous_variant p.His278His
C/A 29013266 missense_variant p.Pro324Thr

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_36773.1
MNIHDHDHHLQSPETTESHNSSSGLGLLHQDAAASNFVIGNHHNHHHHHHHHHTTKQLDFMDLTLGSSKDEGNLQGSGGAASSVFGHHASGSSSADGNVNNLQQPSEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSANEKGLLLNFEDRNGKSWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGDLYRHRLYIDWRRRPDHHHHHGPDPSATLFTPFFLPNQQHFIRWGATGRFYSLPSPNPPRHHDHLQQHLNYNTMYHQHHHPFHHQLQGAAGAGGNGTHHYNNYHDMSSSGSGSVYYLRSTPPPMPFTDHQTLNTRQQQQEGGNVSHPPIIIDSVPVAHHHHHHQHHRGGKSGGSSTSTSPSTAGKRLRLFGVNMECASSTSEDPNCFSLLSSSSMAHATMANSNSPPSSSLPPLQLLREDSLSSPSSARFGDQRGEQPSMLFDLDPSLQYRQ*


CDS Sequence:
>Vu_36773.1
ATGAATATTCATGATCATGATCATCATCTTCAGTCTCCAGAGACCACTGAATCTCACAATTCATCATCTGGGCTAGGGTTGTTACACCAGGATGCAGCAGCTTCCAATTTCGTCATCGGCAATCATCATAATCATCATCATCATCATCATCATCACCACACAACAAAGCAGCTAGATTTCATGGACTTGACACTGGGGAGCAGCAAGGATGAGGGGAATTTGCAAGGATCGGGAGGTGCTGCTTCTTCTGTGTTTGGTCATCATGCAAGTGGTAGTTCTTCTGCCGATGGTAACGTTAACAACCTGCAGCAGCCTTCTGAGAAGGAGCACATGTTTGACAAAGTTGTGACACCGAGTGATGTGGGTAAGCTGAACCGATTGGTGATACCAAAGCAGCATGCTGAGAAGTATTTCCCTCTTGATTCCTCAGCCAATGAGAAGGGGCTGCTGCTCAATTTTGAGGACAGAAATGGTAAGTCATGGAGGTTCAGGTACTCTTATTGGAACAGCAGCCAGAGCTATGTGATGACCAAAGGGTGGAGCCGTTTTGTGAAGGAGAAGAAACTTGATGCCGGTGACATTGTGTCCTTCCAGCGTGGTGTAGGGGATTTGTATAGGCATAGGTTGTACATAGATTGGAGGAGAAGGCCCGATCACCATCACCACCATGGCCCTGACCCTTCAGCCACACTCTTCACACCTTTCTTTCTTCCCAATCAGCAACACTTCATCAGATGGGGTGCCACTGGAAGATTCTACTCCCTCCCCTCGCCAAACCCACCACGCCACCATGACCATTTGCAACAACACCTCAATTACAACACCATGTATCATCAACATCATCATCCCTTTCATCACCAATTGCAAGGTGCTGCTGGTGCTGGAGGAAATGGAACTCATCACTACAACAACTATCATGACATGAGTAGTTCAGGATCTGGCTCGGTCTATTACCTCAGGTCAACACCCCCACCAATGCCATTCACTGATCACCAAACCTTGAACACAAGACAACAACAACAAGAGGGAGGCAATGTTTCTCATCCTCCTATAATCATTGATTCTGTTCCAGTTGCTCACCACCACCATCATCACCAGCACCACCGTGGTGGCAAGAGTGGTGGTTCTAGTACTAGTACAAGTCCTAGCACTGCAGGCAAAAGACTTAGGCTGTTTGGGGTGAATATGGAATGTGCTTCTTCAACATCAGAAGACCCCAACTGCTTCAGCTTATTGTCCTCATCTTCAATGGCACATGCGACAATGGCTAATTCCAATTCACCTCCCTCTTCTTCACTACCACCTCTTCAGCTTTTGAGGGAAGACTCACTTTCATCACCATCATCAGCAAGGTTTGGGGATCAGAGAGGGGAACAACCTTCAATGCTTTTTGATCTGGATCCTTCTTTGCAATACCGGCAGTGA


Promoter Sequence:
>Vu_36773::LG11:29010203-29012203(+)
TTAATTAAATATGAACAAAACTAAAAATCCCATTTTTAGAAAAAATATTACAAGCTCATAAAATATGACATGAAAATTGTATATTTTTTTGATCAGTTAATTAATAATTGAATAAAGAATGTGGTTTTTTTTTATATTTCATAATTCAAGTAGGTTTGTTTTGGTTCACCAGTTACAACAATAAATATGAATTTATAAGAATGAAAGTTGAGCTGGTGTGAAGAAGTAATAAAATGAAGGTGGAAAAGTTTATTATGCAGAGAGGAAGAAATTCGAAAAAGCAGGAAAGGAAAATAAATTATGCATACGTGATGATAATGACAATGAGGAAGAAGTAATATAATTAAAAGCCAGAAAGAACTAAAAGGTGATATTTGGCATGTTTTTTGGGATCCGGGACATTAAATTATGACTGAGCTCGGGAGTTGGAAGTTTTGAAGAAGAAGTTATTGGTCTGGAATATATTTATTTTTCCCTTAAATTTATACAGTTGAGGAATATTGAAGAGGGAATCACATGTATGGTTGCATTGCATAGGAGGTGTAGCTGAGAAAAAGAGATGATAATTGAATGAGAATGAAGAAACGAAACCAGAGTTTACATTCTCATGTTAAGAAACATGTTCTTGCCTAAAAAAACCATGAAAAACAAGGATTAGAACATTGTTATGAGTTAAACTGATGTTTTGTAATGAAACATGTACATTTGATTGTGTAGTGTTTGACAGTGTTGTAATTGTGAAAAAATTATGGGTAGGAGGGACCAGCAAGAGAGAGAGAGAGCACACAATGAATGGCACCAAAAGTCAAAAAAAAGAGAAACTCAAATCAACCTAACACTGTACAGAGAGTCTCTCTCTCTCTCTCTCTCCTCTACTACACCGTTGGCACTGCAATGTGTTGCACCTCCCTCTACTTCTCTTCTGTCTAATAACAACAACTTGTCATAGATATCCTTTCCCTTTTCCACATTTAATAATTTTGAGAAACTAAAAGAAAATGGGGTGGGATCAGATTTAACAAAGTGAAGCTCTTTTCTTCTGGAACAAGTGGCCTTTTAGTGTAGAACCGGAAGCATATATTGTACAGATTATTATTATTGTTATCCCAAATATCATGAAAATGACTACTTGCTCACATGACCCCAATACGCACATTATTCATGGGCCCCCCACGTAAGTGTAGTAACCCTCTTTTCTTTCTCTCTCTTTTTTTTTCTCCTCTCTCTCTCTGTTGATGTGTTTAAGAATAAAACTGGGTTGGAGCAAATATTTTTGGTTCTTTTGTTACTTGTAAAGAAGCTTCCTTTGAGGTAACTACACTTGGGTTAGCTAAAACTCACATCACCCTCTTTCCCATCTCCATCTCTCTAACATATTCAGCTGTTTAGGTCAACAATAACCCCGTTTTGAATCCTCCATGCCTTGTCTTTCTTTAGGGTTTGATGCCTCATGGTCAAATATGAAGGCACCGACTCTTACAATTCTCTTCTAGTACTAAATAAGCACCTGCTTTTCTTTGTTTTCTTCACAGCCTCACATATCTATCTGCCTACTCAAATATCTTCTCAGTTCTCCAACTATATATTTATTTCTTGGTAATTGAAATAATTTCTTCCTATGTATATATATAATCTTGTCAATTTTCAGACTCTAAATTTTGCATTTTTATTTTTTATTTTTACTTCTTTTCCTCCTCTTCCTTCTCCTCCTCTTGTTCTTCTTCTTGTTGTTCTCCTCTCTTTATGATTTCGTTTTTTTTCAATTATTTGGTGACATTGTTTAATTTGGTGAGATCCAGAGGTTATAATTAGCAGAATTGAAGGTGGGGTCAGTGTGTAATTTTATGGAGTTGATGCAAGAAGTGAAAGGGTATTCCGATAGCAGAGAGGAGGAAGAGGAAGAGGAGACAGCAGAAGAAATCGTCACAAGAGAAGAAAGCAGCAGTAAGCACCACTACCCCTTTTCTTCTCCCTCTTTGTCTTTATCTCCTGCTCCTTCA


Gene Sequence:
>Vu_36773(+)
AATATCAAATTATACTTCTACTACTTCTGCTGCACGTCCTCATCACCATCATCATGTAATAAATATTCCTCACCAACAAAATCCATGGCTGGGGATGAATATTCATGATCATGATCATCATCTTCAGTCTCCAGAGACCACTGAATCTCACAATTCATCATCTGGGCTAGGGTTGTTACACCAGGATGCAGCAGCTTCCAATTTCGTCATCGGCAATCATCATAATCATCATCATCATCATCATCATCACCACACAACAAAGCAGCTAGATTTCATGGACTTGACACTGGGGAGCAGCAAGGATGAGGGGAATTTGCAAGGATCGGGAGGTGCTGCTTCTTCTGTGTTTGGTCATCATGCAAGTGGTAGTTCTTCTGCCGATGGTAACGTTAACAACCTGCAGCAGCCTTCTGAGAAGGAGCACATGTTTGACAAAGTTGTGACACCGAGTGATGTGGGTAAGCTGAACCGATTGGTGATACCAAAGCAGCATGCTGAGAAGTATTTCCCTCTTGATTCCTCAGCCAATGAGAAGGGGCTGCTGCTCAATTTTGAGGACAGAAATGGTAAGTCATGGAGGTTCAGGTACTCTTATTGGAACAGCAGCCAGAGCTATGTGATGACCAAAGGGTGGAGCCGTTTTGTGAAGGAGAAGAAACTTGATGCCGGTGACATTGTGTCCTTCCAGCGTGGTGTAGGGGATTTGTATAGGCATAGGTTGTACATAGATTGGAGGAGAAGGCCCGATCACCATCACCACCATGGCCCTGACCCTTCAGCCACACTCTTCACACCTTTCTTTCTTCCCAATCAGCAACACTTCATCAGATGGGGTGCCACTGGAAGATTCTACTCCCTCCCCTCGCCAAACCCACCACGCCACCATGACCATTTGCAACAACACCTCAATTACAACACCATGTATCATCAACATCATCATCCCTTTCATCACCAATTGCAAGGTGCTGCTGGTGCTGGAGGAAATGGAACTCATCACTACAACAACTATCATGACATGAGTAGTTCAGGATCTGGCTCGGTCTATTACCTCAGGTCAACACCCCCACCAATGCCATTCACTGATCACCAAACCTTGAACACAAGACAACAACAACAAGAGGGAGGCAATGTTTCTCATCCTCCTATAATCATTGATTCTGTTCCAGTTGCTCACCACCACCATCATCACCAGCACCACCGTGGTGGCAAGAGTGGTGGTTCTAGTACTAGTACAAGTCCTAGCACTGCAGGCAAAAGACTTAGGCTGTTTGGGGTGAATATGGAATGTGCTTCTTCAACATCAGAAGACCCCAACTGCTTCAGCTTATTGTCCTCATCTTCAATGGCACATGCGACAATGGCTAATTCCAATTCACCTCCCTCTTCTTCACTACCACCTCTTCAGCTTTTGAGGGAAGACTCACTTTCATCACCATCATCAGCAAGGTTTGGGGATCAGAGAGGGGAACAACCTTCAATGCTTTTTGATCTGGATCCTTCTTTGCAATACCGGCAGTGATAAACAAATTGATGAAGAAACCAATAATGAAGAAGATACGAGTTTGATCTAAAGTCACCTGGGCTAGCTACACTTTCTTTTGCAGCATTTTTATTATATTTTAAATTTTTTTTCCCTTTCTCTTTTGTTTCTTTCATCAGCTACAAAGGAAAGAAAAGGCTCCCAGACCTTCTTGTTCTTCTGCTTCTTCTTTTGATCAGTAATTAGTTTTTAGCTTTTGCACGTTTTGGAGTCTTTAGTACGTTTAGAACTGCTCAATGAATTAATTAGCTTGGGATTTGGGCCCTGAAGAAATGGAATATCCATCGTTTCACAACCTAAAGAGGGAAATGAAATCCATATGGAGATCAATTACGTT