Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_36769 LG11 28958534 28963438 hypothetical protein
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   autophagosome assembly, autophagy, autophagosome assembly, peptidyl-serine phosphorylation, response to starvation, protein phosphorylation, reticulophagy, reticulophagy, autophagy, piecemeal microautophagy of the nucleus, peptidyl-serine phosphorylation, reticulophagy, piecemeal microautophagy of the nucleus, autophagy of mitochondrion, autophagy of mitochondrion, autophagosome assembly, autophagy, late nucleophagy, protein phosphorylation, protein phosphorylation, autophagy of mitochondrion, late nucleophagy, autophagy of mitochondrion, late nucleophagy, autophagy, response to starvation, autophagy, reticulophagy, peptidyl-serine phosphorylation, autophagy, autophagosome assembly, piecemeal microautophagy of the nucleus
Cellular Component   is active in   cytoplasm, phagophore assembly site membrane, phagophore assembly site membrane
Cellular Component   located in   cytoplasm, autophagosome, nucleus
Molecular Function   enables   protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein binding, protein serine/threonine kinase activity
SNP Position Effect Amino acid change
G/T 28959278 downstream_gene_variant
A/C 28959608 downstream_gene_variant
A/T 28959903 downstream_gene_variant
A/C 28960023 downstream_gene_variant
C/T 28960276 missense_variant p.Gly367Arg
A/T 28960684 downstream_gene_variant
C/T 28960706 downstream_gene_variant
G/A 28960729 downstream_gene_variant
G/T 28960754 downstream_gene_variant
A/T 28960768 splice_region_variant&intron_variant
A/T 28960943 missense_variant p.Leu251Ile
G/A 28960995 synonymous_variant p.Pro233Pro
A/T 28961036 missense_variant p.Phe220Ile
G/T 28961062 downstream_gene_variant
G/A 28961070 downstream_gene_variant
G/A 28961075 downstream_gene_variant
A/T 28961587 downstream_gene_variant
T/C 28961607 downstream_gene_variant
T/A 28961615 downstream_gene_variant
C/T 28961646 downstream_gene_variant
G/A 28961718 upstream_gene_variant
G/A 28961723 upstream_gene_variant
T/C 28961740 upstream_gene_variant
T/A 28961861 upstream_gene_variant
A/G 28961909 upstream_gene_variant
C/T 28961911 upstream_gene_variant
C/T 28962013 upstream_gene_variant
C/T 28962082 upstream_gene_variant
T/A 28962112 upstream_gene_variant
C/A 28962179 upstream_gene_variant
G/A 28962272 synonymous_variant p.Asn129Asn
A/G 28962308 splice_region_variant&intron_variant
A/C 28962434 upstream_gene_variant
C/T 28962459 upstream_gene_variant
C/A 28962470 upstream_gene_variant
A/T 28962798 upstream_gene_variant
T/C 28962903 upstream_gene_variant
T/A 28962928 upstream_gene_variant
G/A 28962943 upstream_gene_variant
T/C 28963010 upstream_gene_variant
C/T 28963024 splice_region_variant&intron_variant
T/G 28963170 synonymous_variant p.Arg32Arg
G/A 28963201 missense_variant p.Ser22Phe
C/T 28963206 synonymous_variant p.Ser20Ser
T/A 28963347 5_prime_UTR_premature_start_codon_gain_variant
C/T 28963352 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_36769.1
MITMEPRVIGDYIMGPPIGSGSFAVVWRSRHRVSGLEVAIKEIDQRQLSPKVHEHLLKEISILSTIKHPNIVRLFETIQTNDRIYLVLEYCAGGDLAAYIHRHGKVSETIARHLMRQLAAGLQVLQEKNLIHRDLKPQNLLLATTAATPIMKIGDFGFARSLTPQSLADTLCGSPYYMAPEIIENQKYDAKADLWSVGAILYQLVIGRPPFDGNTQYQLFQNILASTELYFPPEALQELHSDCLDLCRNLLRQNPDERLTFKAFFNHNFLQNSRSTVGKLTVHQSGGSLSEMSPTIASDSRLMQSVEKDYVLVHSHFASLEAFSDYFDASVQDDSLYSIAQSHSKIAKPDIGVPKQTTDLTSSSSRGLENLESNKLEACVASCEFTALREEHDISSLQPSNRLKLLHEYGKILKELSQQKYDTGLYLESLAVELVILAIWKKALEICNSWMASLTTSGFPESSSTNESISSSNVELPQTSELKINFSDPPSVSMWAKHEFVLAVDRAEKLSCRVQNMDGAAEMPDAMEIIFQNALSIGTSGAVDEYMENRDRASASYSRAMLLLSFLVREAENLPLNPPFSLIATNKERILQYIYTLQSRKKSSLESSSNKLLSLTIK*


CDS Sequence:
>Vu_36769.1
ATGATAACCATGGAACCTAGAGTGATAGGGGATTACATAATGGGTCCTCCAATCGGGTCGGGTTCCTTTGCCGTGGTATGGCGTTCAAGGCACCGAGTTTCCGGTTTGGAAGTTGCGATTAAGGAGATTGATCAGAGACAACTCAGTCCTAAAGTCCACGAACATCTTCTCAAAGAGATTTCGATCCTTAGCACCATCAAGCACCCCAACATAGTTCGACTCTTTGAGACAATTCAGACCAATGACAGGATTTACCTTGTTTTGGAGTATTGTGCTGGTGGGGACCTTGCTGCTTACATTCACCGCCATGGCAAAGTTTCTGAAACTATTGCACGCCATCTCATGAGGCAATTGGCTGCTGGGTTACAGGTGCTTCAGGAAAAGAACCTCATTCACAGAGATTTAAAACCACAGAATTTACTATTGGCAACTACTGCAGCCACACCAATTATGAAAATAGGAGATTTTGGTTTTGCAAGGTCTCTCACACCCCAGAGTTTGGCTGATACACTATGTGGTTCACCTTATTACATGGCTCCAGAGATTATTGAGAATCAAAAGTACGATGCCAAGGCTGATTTATGGAGTGTTGGAGCAATTTTGTATCAACTAGTGATTGGGAGGCCACCATTTGATGGAAATACTCAATATCAGCTTTTTCAAAATATTTTGGCATCCACTGAACTGTACTTTCCGCCCGAGGCATTACAAGAGCTACATTCTGATTGCTTGGATCTTTGCAGAAACCTCTTACGTCAAAATCCAGATGAGAGATTAACATTCAAGGCATTCTTCAACCACAATTTCCTTCAGAATTCCAGGTCAACCGTAGGAAAATTGACTGTTCATCAATCAGGTGGCTCTCTGTCCGAGATGTCTCCAACTATTGCAAGTGATTCCCGTTTAATGCAGTCTGTAGAGAAAGACTATGTACTTGTCCATTCCCATTTTGCATCATTGGAGGCTTTTTCTGACTACTTTGATGCATCTGTGCAAGATGATTCCTTATACAGTATTGCTCAAAGTCATTCAAAGATTGCTAAACCGGATATTGGAGTTCCAAAACAAACAACGGATCTGACATCTTCCTCCAGTAGAGGATTAGAGAATCTAGAAAGCAATAAACTTGAGGCATGTGTGGCATCATGTGAATTTACTGCTTTAAGGGAAGAGCATGATATTTCCTCACTGCAACCTTCAAACAGGTTAAAGTTGTTGCATGAGTATGGGAAGATCCTTAAAGAACTTTCGCAACAAAAGTATGATACAGGACTGTATCTAGAGTCACTTGCAGTTGAGTTGGTGATTCTGGCGATATGGAAGAAGGCTCTAGAAATCTGTAACTCTTGGATGGCCTCCCTTACTACTAGTGGGTTTCCTGAAAGCAGTTCAACTAACGAATCCATATCTTCAAGTAATGTGGAGTTACCACAGACTTCAGAACTGAAAATAAATTTTAGTGATCCTCCCTCTGTCTCCATGTGGGCAAAACATGAGTTTGTTCTTGCTGTTGATCGTGCTGAAAAACTATCATGTCGTGTTCAAAATATGGATGGAGCTGCTGAGATGCCAGATGCAATGGAAATTATATTCCAAAACGCTCTTTCAATCGGGACAAGTGGTGCGGTAGATGAATATATGGAGAACAGAGATAGGGCTAGTGCTTCTTACTCAAGAGCGATGCTGCTACTTTCATTTTTGGTGAGAGAAGCAGAGAACCTTCCACTGAACCCACCATTTTCACTCATTGCCACTAATAAAGAGAGAATCTTACAATACATTTACACATTACAGTCTCGTAAGAAATCTTCGTTGGAGTCCTCTTCAAATAAGCTACTTTCACTTACAATAAAGTAG


Promoter Sequence:
>Vu_36769::LG11:28963438-28965438(-)
AAATTTATAACTACTCTATAATCACGACACTTGAAAAAAAAATGTTAATTGAATTTGATAATGTCTAAAATTAAATATAAAATGAACCTGTCAACAACGTGTTAATTCAAGTAGAAAACCTAGCAAATAGTTTTAGGTTGACTTTGAGATTCATTGGTGGGAATTTAATTGCTCTAAATGATATAGTAAACCTTAAAACATAAAGTATATTTTGTAACTGTTAATTTAAAAAGTATTAAATATGTTTTTGGTTTCAATAAAAATTAGAATTAATTTATTTTTAAAACTTTAACTCAATTTAGTATAAAAATGTAAATTTAGTTATTTAACTAAATTTTGTTAAATTTATTTTATTAACGAAAATATTAAATAACTCAAATTTTAATATAATTTTTAAAATTATTTTATTAATTAAGATAATAGAGAGATTATATTCACATATTTTTAAAACTGAAATTAAATTAAATTAAATTTTTAAAAATAAACTAATTTTCATTTTCATTTAAAATTAAGAGATAAAAACATATTTAATTTTTGAAAAAAATTATAAACCTAATAAATTTCTTGGTCCTTGCAAGGACGTGGTAAAACAATTAAATTGCATATATGTTTAGTGATAATCATTTATTCTTGTTAATTGAATTTGAACAATAATAATTTTTTTACTTAGTAAGTAATATTCAATTATATTTCTTTCACCATTTTAAATATGAAATGATTGAAGAGATAAGATTAACAAAATAAATATATTTGAACTAAGACATGCATTTTTATTGACATGATGTAATAAAGTTAATTTAAATTTAGGTTAAGTAAAACTACAATATTTTGAAATTTAGTTCACTAAAAAAGAAAATATTTTAAGAAGAGAATAATAACAAAAACTCATTATTACTATTAATTAATGTAAGTCATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTAACTTTTTTATTTTATTTATTACGATCATGTATTTATTTGAATGTATTAATATTATTAAAAAATCATTATTTATGTTGCATTAACAATATATTTATGTAGTTATTTGTTAGTTATCAAATTAATTATAATTGGATTAAATATTTGTAGTCCTAATTATCTTTTTTGTTTCTTAAAATCCAAATAATTTTTATTGAAAAACATTTTACAACTGAATAATAAATAACTTTTCGACCCAAACAATTACAGGAAATCATGATTTTAAAAATATGAAACTATACTTTTATTTATCCTAATTTATAATAATATGTATGCTAATTTTCAGTGCATTTATTAATTGAAATTGAAAGAGGTTCTTAAAAAAATTAAACAGTCTGTCAAACTAGATAATATATAATTTGATTAAGAGGAAATAAATTATAAACCAATTCCCAAAGTTCTCTAAAATTTCTAACTAATAACTAACCCAGGCAGTTAAAATTCAGAAACAGAAATCAAGTTATTAATGTCAAATAAATATAAATTAAATATTAATTTTATCAGAACATGAATTATCATTTTTTTAAATAATATATAGTAAAAACAGTATCCCGTGTACATAAATTATTTTTCTATTTTAATAAGACACTCACTTACATTAGAAAAAATAACTGGATGTAATTATATTATTTTATATAATAAAAACATTGAATAAACTAATATATATATATATATTTGTATTTATAAAAAATATAAGAAAAATAGAAAGGATGGATCTCTAACCTAAAACTATGAAAACATTAGTAAAATGAAAAACTAAGGTACTCTGCTAGTATATAAAATATAATATTTGAATTTGGTCACACTATTTTCCAATTTAATTTAACATATAGAAAAGGAAAATAATCTGTGGAAACAGATTTTCAAAATTGTTCTTAGTCTGAAAACAAAAAGCAATTTTACATATATAGAAAAATAGAAACAAAATATCAAATCAAATTAACAAACCTGAAATCAAATCTTATATCAGGAGAAAAAGTTGGAAAGAAAAAACAAAAAAAAGGAA


Gene Sequence:
>Vu_36769(-)
GTGTTATAAATAATAAAGAGTTGAGGTTGGTTTTTCCACTGACATTCTCTGATTTCACTGGGCAGCATCATCTTCTCCACCCAAATGTTCAAGTTGGAATCTTTGGAGCGATTTCGAAGTTGGTATGACTCTATATAAGTATTGTGTTAAATAAACAGTTCTGGGTGGTGACGATGATAACCATGGAACCTAGAGTGATAGGGGATTACATAATGGGTCCTCCAATCGGGTCGGGTTCCTTTGCCGTGGTATGGCGTTCAAGGCACCGAGTTTCCGGTTTGGAAGTTGCGATTAAGGAGATTGATCAGAGACAACTCAGTCCTAAAGTCCACGAACATCTTCTCAAAGAGATTTCGATCCTTAGCACCATCAAGCACCCCAACATAGTTCGACTCTTTGAGACAATTCAGGTAAGTTTTGATTTTTTTAGTCAGTTGAGAATTATGCACAAACAAAGATTGAGTCTAATGGAAAAGACAAGTTTCTGAAATGAAGCGACACACTGTTGGGAGAGATGCTCACAATTTGTATGAGAATATTTTGAATAGAATTATCTCTGCATAAAAAATAAAAAAAATAATTTTTTTTTTCTGTAACTTTGTTGTTTGAAAGAATGTGGGATTTACTTGTGTTGAAGATATGTGTATATTTAGTATTGTTCAATATATCGAATAAAACTGAGTTCAAAGTTGGAATATTCTTGTTTTGAAAGAAGAATGAGTGTGTCTTTGTTGTTGTGGTTTAAGACCAATGACAGGATTTACCTTGTTTTGGAGTATTGTGCTGGTGGGGACCTTGCTGCTTACATTCACCGCCATGGCAAAGTTTCTGAAACTATTGCACGCCATCTCATGAGGCAATTGGGTTAGTGAGTGTTTTTCAATCATTTGGTCTTTTCTATACTAATTCTTTCGGGTGCACTATTTTGGCTGCTTGCTAATTCTTTTGTGACATATGTTACTATGGATGATTTCGTTTTGCTTATTAATATAGGTTTTTCCAAATTTTTGTACTTTCTTAATGGTTATGTTTTTTTTTGCTTGTACTAAACTTGGTGATCTGTTTTATCATGCAATTCATTCAATGGTAAGCAATGGGTAAATTTCTATAGTTTATAATCTGGGTGTTCTTGTAGCTGCTGGGTTACAGGTGCTTCAGGAAAAGAACCTCATTCACAGAGATTTAAAACCACAGGTATCTCAGTGTATTTTGTGATGTTGTAGACTTTTCATTGTAGTTACTAATATATGTTTGCCTTGGTGTATTTTAATTTATTGTCACTGTTAATTATTGTATCACTTGCTGGGAACTCTTGTTTTTCCCTTTACCTGTGAGCTTTTAATAATTTTTACATGAGATCATCAATTTATCATAGCTTCATACCTGTAGCGAAAAGTGCACAGTAAATAACAGACGGACAAGTACGTACAAGTAGAGAAGGGAAAACTTTTGAAACTTGTGAAACCACTTAGTTTAGAAATCATATATCGGTATGTAATATGTTACAAATTATAAATCTATATAATTGATTACTTTTGAACTCATAATTGGTTTATGTATTATTGCACACATATCAAATCATTTGTCATGTCTTTATTTTTGTATGCAGAATTTACTATTGGCAACTACTGCAGCCACACCAATTATGAAAATAGGAGATTTTGGTTTTGCAAGGTATGATGGTTTCTCGGATGTTAAACAATGGAAACAAAATTCTTCCCCCTGTTGCTGTTATAATCCGGAACAACTCAATACTTACTTCTTTTTTTCCTTTTCTGATGTTTTATTTATTGCTCATTGTGGAATATAGTTGATTGTTGTAGACATTGATAAATTGATTAACTTGACCCTTGGCCATCTTTATAAACAATGTATTTGCTTGTAGATGCTTCATCAACTCTGTATAATATCTCTGTTTTAGTTTTATATGTAAATTATTCAAATGGTTTGTCATATTTGGTAATTGTTTTTCTTCAATCTGGTTGAAGCAATAAGGTAAAAAAACATGAATTTCTTGCAAAGGGTAGTTTCCTGATGTATCATTGTTCTAGGTCTCTCACACCCCAGAGTTTGGCTGATACACTATGTGGTTCACCTTATTACATGGCTCCAGAGATTATTGAGAATCAAAAGTACGATGCCAAGGTGACAAAAGATAGAACTGGAATCAAATTCTAATTGCTAACATCTGTTATTGTTTTCTTCATAAAGATATGAATCATATTGTGGATGCAGGCTGATTTATGGAGTGTTGGAGCAATTTTGTATCAACTAGTGATTGGGAGGCCACCATTTGATGGAAATACTCAATATCAGGTTTTGAGAAGGAACAATCAGTATTTCTTTTGGTAAATAGTCATGTGCCTTACTTTTTTTCTTATCATAATTTTTTGTTACAGCTTTTTCAAAATATTTTGGCATCCACTGAACTGTACTTTCCGCCCGAGGCATTACAAGAGCTACATTCTGATTGCTTGGATCTTTGCAGAAACCTCTTACGTCAAAATCCAGGTATTCATTGTAACTTCATGTCATGGACATACATGTATTTTTAATAACAATTGGTTAGAGCTTATTCTAGAAAACTTTAATGTTATGCTGTAATATGCAGATGAGAGATTAACATTCAAGGCATTCTTCAACCACAATTTCCTTCAGAATTCCAGGTCATTATTCTTTAATTTCTTTTTTTGTCTTCAGTTCTTGTATCCTGTTGCATTTCTTTCAATCTCGTAGCTATTTGTAGTGATTTCTTGTCCTTCATAACTTATAGGTCAACCGTAGGAAAATTGACTGTTCATCAATCAGGTGGCTCTCTGTCCGAGATGTCTCCAACTATTGCAAGTGGTAAGATGGGGAAGGCTGTTGATGCTGATACTCATTTGTCATACCCTGTATGCTGTATTCTCATTTTTGCATTGTTTTCTTTACAGTTTCTAATACTTGCTTTTGTATTCAGATTCCCGTTTAATGCAGTCTGTAGAGAAAGACTATGTACTTGTCCATTCCCATTTTGCATCATTGGAGGCTTTTTCTGACTACTTTGATGCATCTGTGCAAGATGATTCCTTATACAGTATTGCTCAAAGTCATTCAAAGATTGCTAAACCGGATATTGGAGTTCCAAAACAAACAACGGATCTGACATCTTCCTCCAGTAGAGGATTAGAGAATCTAGAAAGCAATAAACTTGAGGCATGTGTGGCATCATGTGAATTTACTGCTTTAAGGGAAGAGCATGATATTTCCTCACTGCAACCTTCAAACAGGTTAAAGTTGTTGCATGAGTATGGGAAGATCCTTAAAGAACTTTCGCAACAAAAGGTGAGTTTATGTTCAGTAAACCCAAGGTCATTACATTAATATTTTCAGAGAATATTTTGAAATTTTAAATGAAAAAAAGATAGTTATTAACTTTTTCTCTTGATGGCATGATCCCATATCTAACGATTGAGTTCTATATTCCTTTGAATTTTTCAGTTCTTTTCTCTGTCAGTGTCATATGAATGTTTTATTCTATGCAGCATTACATATCTGAATGATAACCAGCCATGTTTGAATGGATTCTTTTTCATAGTTAATTTGTAATTTTCCTATTGGATTCTATTAGATTGCAAATTGGTTGAATGCTTCTTAGGGTCTATTTGGACGAGCTTGTAAAGAAAAATAAGAAGTAAAAAATGAAATTGACTTCTCTTTATGTTAAAATTATATCATGAATAAACTAATGTGTAGAAATTCTCTCGTAGTTTCTAAAATTTTTTATTTAACTTGTGCTTAAGTTAAATTTAGCTCATGGAAAAACCAATCTTAATGTTCCATAATCAATCTAAATTTTAATGGTGATTTGGTGCAGTATGATACAGGACTGTATCTAGAGTCACTTGCAGTTGAGTTGGTGATTCTGGCGATATGGAAGAAGGCTCTAGAAATCTGTAACTCTTGGATGGCCTCCCTTACTACTAGTGGGTTTCCTGAAAGCAGTTCAACTAACGAATCCATATCTTCAAGTAATGTGGAGTTACCACAGACTTCAGAACTGAAAATAAATTTTAGTGATCCTCCCTCTGTCTCCATGTGGGCAAAACATGAGTTTGTTCTTGCTGTTGATCGTGCTGAAAAACTATCATGTCGTGTTCAAAATATGGATGGTAGGATTTCTTTATGTTTCTGAACTTAAAATCCTTTCATGGCTTGTAAAGATATAATAATGTTAACTACCTACTCCCAAAAACATATTGCAGGAGCTGCTGAGATGCCAGATGCAATGGAAATTATATTCCAAAACGCTCTTTCAATCGGGACAAGTGGTGCGGTGAGTAGCCTAATATTCTTCACTTTTAGATTTCCTTCCAAACTTGCAATTTTCCCCAAAGAGCATATACACGTAAAAATGTGATCTTTATAAAATAATCAGCACTTGCCTGAGTAGGTAAATGAATATTTTTTCTTTTTTGCCATTTTTTTAGGTAGATGAATATATGGAGAACAGAGATAGGGCTAGTGCTTCTTACTCAAGAGCGATGCTGCTACTTTCATTTTTGGTGAGAGAAGCAGAGAACCTTCCACTGAACCCACCATTTTCACTCATTGCCACTAATAAAGAGAGAATCTTACAATACATTTACACATTACAGTCTCGTAAGAAATCTTCGTTGGAGTCCTCTTCAAATAAGCTACTTTCACTTACAATAAAGTAGATGTAACGAGGGTTGTTATATAACTAACTATCATTGCCATGTAAAGGGGACTTTCCTTTGCTGCATGATTTTATGTATATAATGATAATTCTTTGACATGGGAATTTGTAAATATTGTATAGCTCATAGTTCTATACAATTTTGAAAACACTATCACCAATGAATTGAAATTTCTTGTGGAAAATTATATTTAGATTTCACTTAG