Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_36690 LG11 27906280 27907323 PREDICTED: transcription repressor MYB6-like
Map

Annotations  
category   relationship type   keyword
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
T/C 27906579 missense_variant p.His190Arg
T/C 27906592 missense_variant p.Arg186Gly
G/A 27907040 downstream_gene_variant
G/T 27907085 downstream_gene_variant
C/G 27907096 downstream_gene_variant
T/G 27907155 downstream_gene_variant
T/C 27907158 downstream_gene_variant
A/C 27907171 downstream_gene_variant
C/A 27907175 downstream_gene_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_36690.1
MGRAPCCSKVGLHKGPWTPKEDALLTKYIQAHGEGQWKSLPKKAGLLRCGKSCRLRWMNYLRPDIKRGNITPEEDDLIIRMHSLLGNRWSLIAGRLPGRTDNEIKNYWNTHLCKKLKNQTGEDTETPNSLESPQQEPASGSKKKKNGGKKKNKQKNKGDKDNAEPPKTQVYLPKPIRAKALYLPRTDSNNTYTFDSNSASASTNQEKEESPLTKESNLASEFRNVGESDDFGFFSEDHDLVNASDMECHSYFPSDHGSLQQLYEEYYHLLNMDHSQFIEMSSFGESLLV*


CDS Sequence:
>Vu_36690.1
ATGGGAAGAGCTCCTTGTTGTTCTAAAGTAGGGTTGCACAAAGGTCCATGGACTCCTAAAGAAGATGCATTGCTTACAAAGTATATACAAGCTCATGGAGAAGGCCAATGGAAATCACTACCCAAAAAAGCTGGGCTTCTTAGATGTGGGAAAAGTTGCAGATTGAGATGGATGAATTATCTGAGACCTGATATAAAGAGAGGAAACATAACCCCAGAAGAAGATGATCTTATAATCAGAATGCATTCACTTTTGGGGAACAGATGGTCCCTCATAGCAGGAAGATTACCAGGCAGAACCGACAATGAAATAAAGAACTATTGGAACACCCATCTCTGCAAAAAGCTGAAAAATCAAACAGGAGAAGATACTGAGACACCCAATTCCTTGGAGAGTCCTCAGCAAGAACCTGCAAGTGGCAGCAAAAAGAAGAAGAACGGTGGCAAAAAGAAGAACAAGCAGAAGAACAAAGGAGACAAAGATAATGCAGAGCCACCAAAGACACAAGTTTACCTACCAAAACCAATCAGAGCGAAGGCTTTGTATTTGCCAAGAACAGATAGTAATAACACATACACCTTTGATTCCAACTCGGCAAGTGCATCAACAAACCAAGAAAAGGAAGAAAGCCCCTTGACAAAAGAATCAAACTTGGCCAGTGAATTTAGAAATGTGGGAGAAAGTGATGATTTTGGCTTCTTCAGTGAGGACCATGACCTGGTCAATGCCTCTGATATGGAATGCCACTCTTATTTTCCTTCAGATCATGGCTCTCTGCAACAACTGTATGAAGAATATTACCACCTCCTGAACATGGATCATAGCCAATTCATCGAAATGAGTTCATTTGGGGAATCTCTATTGGTGTGA


Promoter Sequence:
>Vu_36690::LG11:27907323-27909323(-)
TTTTAATTTAATTCAGAATTGAATAATTATGGTTTCGATGCCAAGTTTGTTAGATGATATTGTTGGATAAATTATTATAGGATGTTTTTTTAACAATTTTTTTTACAAATGATGGGACAGTTTCAGATATTTTTTAAAATTAATTTAAACAGAACAATAAAATAGTAACGTGTGACTTATTGTCAAAAAATTATTATAAAAAATTGTCAATATATCATGGTCTATTATTATTCATTTGATGCATTATCCGTTTTAGAGTATTATTCGTTACTTTTTTATATTTAAGAGATATATCAAAATGAAAAAAGAAAGAAAAATTTTAAAACCTAAACTAAGTGAGACTATCAATGTAATAGAAAAATAAATTTTATTTTTAAGATTAAAAGAATTGATATAGAAAAATACATTTAAATGATTATTAATTTTGACTCTTAAATTACGTAAAAGTATTTAATATTTTGGAACAAACCTTGACATCAAAATCTAAAAATAACGAGAATTTATTTTAAAATTACTTTTTCATTTTCAATAGTGAGGTGTTAGAGGCAAATTTATGCATAATGGAATAACCAGAGGAGTTTCAAGCCATGGACAGCCCACTTTCCAAATTGCAAAAGCTATTCAAATTAGGTTAACTTTTAAATAGTTAATGATTGCATAATTAGTATTTAGACGTTTAATTAATGAGTGACCATTAAGAGATAGTGTGAGATGTTTGTGGTGTTTAGAAAGGACAAAAAAGAAAACGACAAAATGTTATTAGTCTTCTGATTGTTACTGCAGCCGGAGAGAGAGAGGGCGCCGCCGCCAGAGAGAGAGCGCGCAGCCTAATGATGCCGCCGGAGAGAGAAAGAAGGAATATGCTTAGCTTGTCTTAGTATTCTTGTATTTTTTTACTATTGGGTTAAAATAAAATAAATAAAAAAGGAGAGTTATGTGGAAAAATGTTTTTTATTATATTTATTTCCGTGTAGAAATTGGAATGAAAAATATTATCATAAATAGAACGATTTTTAGAAAAAAAAAGTTCTTTTCTTTATACTCTCATCGCATAAAACAAAAATAATAATCAAACAAATTTTACAACTTTTCAAAGAATCTTGATCGTAAATTGCCATTTTGAAAACAGTGGCACGCACAAAAGTAATTTTCTCAATATCTATCTATCGTTTTGGGTTGACTATTCTAGTCTTATTTTTTTCCCTGATCGATATCCTATGTTATTTAACCTAAAGAAAAATCACATTTTAAGTATTTTTATACTTGTCTAACTTTATATCATTTAATCATACCTCGACCTGCTTAGTTTATGTGTATTATTATTTGATTATAAATCTTCATTTTAATTTGAAAGAAACACAATAATAAAAATTGGACTTAAATCGGACGACCAAAACGAGAGAGAAGGCAAAGGTATTGAAATTATGAATTATTATATTTTTATATAATAAGAGTATTTTTTATTATAAATATATTTCATATTCACATATTTTATATTTAATAAAAAATACGTTTTTTTTAAATTTAACAGAGACCAAAATTACATATTTTAAAGTCTGGTTACAAATAATTAATATAAGAAAAAATATATTTTTTTACATAACTTGTTTTTCTGTTATTTTCTTAAAAAACAAAACTGAAAACAAAAATAAGAATCTCGATAACTAACTACCATTATGTTATTAACCACAGGAATATTAAGTAAATAAATCGAGACATGTAGGGAAAATGAATATATAATAGCAGCCACTGTTGGCTTTTCAATTTGTCATCATACACAGCATGATAATGACCGAAAAAACAATAAATAAAATTAAAAAAAATTGGTACGACTCCACTATTATATAAATTCAACAAGTGTTGGCATCTTAAGGTGCTCTGCTTCTGCACTTTCCACCTTCCCATAGAGTTACAAAGAGGACCTTTCGTTCTCTCTCTATCTCTCTCTCTCTCTCTGTTGCATAGTTCAAGTAAGAACCCTAATTTTACAGAGCCAAAAA


Gene Sequence:
>Vu_36690(-)
ATGGGAAGAGCTCCTTGTTGTTCTAAAGTAGGGTTGCACAAAGGTCCATGGACTCCTAAAGAAGATGCATTGCTTACAAAGTATATACAAGCTCATGGAGAAGGCCAATGGAAATCACTACCCAAAAAAGCTGGTAATTGAGAGTTTTGAATTGCTGATTAGCTTATTAATTTCTCAAGTTTAATCTTTTCTTTGATGGGGTGAATGAGTTATGGTTTATGAATACAGAAATAGTGTACAAATTGAATTTTTGTTAATTTTGATTCATTGGGTAAATACTGATCGATGACTGTGATTGAATATGCAGGGCTTCTTAGATGTGGGAAAAGTTGCAGATTGAGATGGATGAATTATCTGAGACCTGATATAAAGAGAGGAAACATAACCCCAGAAGAAGATGATCTTATAATCAGAATGCATTCACTTTTGGGGAACAGATGGTCCCTCATAGCAGGAAGATTACCAGGCAGAACCGACAATGAAATAAAGAACTATTGGAACACCCATCTCTGCAAAAAGCTGAAAAATCAAACAGGAGAAGATACTGAGACACCCAATTCCTTGGAGAGTCCTCAGCAAGAACCTGCAAGTGGCAGCAAAAAGAAGAAGAACGGTGGCAAAAAGAAGAACAAGCAGAAGAACAAAGGAGACAAAGATAATGCAGAGCCACCAAAGACACAAGTTTACCTACCAAAACCAATCAGAGCGAAGGCTTTGTATTTGCCAAGAACAGATAGTAATAACACATACACCTTTGATTCCAACTCGGCAAGTGCATCAACAAACCAAGAAAAGGAAGAAAGCCCCTTGACAAAAGAATCAAACTTGGCCAGTGAATTTAGAAATGTGGGAGAAAGTGATGATTTTGGCTTCTTCAGTGAGGACCATGACCTGGTCAATGCCTCTGATATGGAATGCCACTCTTATTTTCCTTCAGATCATGGCTCTCTGCAACAACTGTATGAAGAATATTACCACCTCCTGAACATGGATCATAGCCAATTCATCGAAATGAGTTCATTTGGGGAATCTCTATTGGTGTGA