Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_36678 LG11 27681683 27684298 PREDICTED: transcription factor bHLH13-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/A 27681841 3_prime_UTR_variant
G/T 27681905 3_prime_UTR_variant
G/T 27681908 3_prime_UTR_variant
C/T 27681935 3_prime_UTR_variant
C/A 27682111 stop_gained p.Glu609*
A/G 27682127 synonymous_variant p.Pro603Pro
T/C 27682321 missense_variant p.Asn539Asp
A/G 27682322 synonymous_variant p.Ser538Ser
A/G 27682325 synonymous_variant p.His537His
C/A 27682535 missense_variant p.Arg467Ser
T/A 27682537 missense_variant p.Arg467Trp
T/C 27682633 missense_variant p.Thr435Ala
T/G 27683174 synonymous_variant p.Thr254Thr
G/T 27683497 missense_variant p.Arg147Ser
C/T 27683612 synonymous_variant p.Gly108Gly
A/C 27683947 5_prime_UTR_variant
A/T 27684026 5_prime_UTR_variant
A/G 27684131 5_prime_UTR_variant
G/A 27684247 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_36678.1
MKIEVGLGGVWNEEEKATVVEVLGRGAFDYLVANSVSNENLLMAFGSGENLQNKLSDLVERTNASNFSWNYAIFWQISQSKFGDWVLGWGDGCCREPREGEESGEVRGRGVVADDEKVQRMRKRVLQKLHMTFGGSDEDNYAFGLDRVTDTEMFFLASMYFSFPRGLGGPGKCFASGKHLWLSDVFKSSFDYCVRSFLAKSAGIQTVVLVPTDMGVVEMGSVRMVGESFELLQALKSVFSAQASLVPPRIKPITPFDLVSEKRDDNANAPFSGVAIGDKEKNNSSNGSNNRVEGNGVPKIFGQDLNSVTQFREKLAVRKMEERPRAWGAHPNGNSVGFPNGIHGSGWGAGQVVRQLGPPEIHAPRLSTSGALSVPELANGTRHDFVHNNYQHQQQQRKAQMQIDFSGATSRASGRSIIAESEISDVEASCKEERTNVADDRRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKTMESERERFGSTSMDGSVVEANARSENHSNGISDVNVEAAQDGVVVKVSCPIDVHPVSKVIQTFKEADIGVVDSKLTAANDTVFHTFVVKSQGPDQLTKEKLIALFSKESNPIQTL*


CDS Sequence:
>Vu_36678.1
ATGAAGATTGAGGTGGGGTTGGGAGGGGTGTGGAATGAGGAAGAGAAAGCGACGGTGGTGGAGGTTCTGGGTCGCGGCGCGTTTGATTACTTGGTGGCGAATTCGGTTTCTAACGAGAATCTGTTAATGGCGTTTGGGAGCGGCGAGAATCTGCAGAACAAGCTTTCGGATCTCGTGGAGCGTACTAACGCGTCGAACTTCAGTTGGAACTACGCGATCTTCTGGCAAATTTCGCAGTCCAAGTTTGGGGATTGGGTTTTGGGGTGGGGAGATGGTTGTTGCAGGGAACCGCGGGAGGGAGAAGAGAGCGGAGAAGTGAGAGGGAGAGGGGTTGTTGCTGACGACGAGAAGGTGCAGAGGATGAGGAAGAGGGTGTTGCAGAAGCTGCACATGACTTTTGGGGGTTCTGACGAGGACAATTATGCTTTTGGGTTGGACCGTGTTACTGACACGGAGATGTTCTTTCTTGCTTCCATGTACTTCTCTTTTCCCCGTGGACTAGGGGGTCCAGGTAAGTGTTTTGCTTCTGGGAAGCATTTGTGGCTTTCGGATGTGTTCAAATCTAGTTTTGATTACTGTGTGAGGTCTTTTTTGGCCAAATCTGCTGGAATTCAGACTGTTGTTTTAGTGCCTACTGATATGGGGGTGGTGGAGATGGGGTCTGTGAGGATGGTGGGTGAGAGTTTTGAGCTTTTGCAGGCTTTGAAGTCTGTGTTTTCTGCACAGGCATCGTTGGTCCCTCCCAGGATTAAGCCAATTACACCATTTGATTTGGTGAGTGAGAAGAGAGATGATAATGCAAATGCCCCTTTTTCTGGTGTGGCAATTGGGGATAAGGAAAAGAATAACAGCAGCAATGGTAGTAATAATAGAGTAGAAGGAAACGGAGTTCCAAAGATTTTTGGGCAAGATTTGAACAGTGTGACTCAATTCAGAGAGAAACTTGCTGTGAGGAAAATGGAAGAGAGGCCGAGGGCGTGGGGAGCTCATCCCAATGGGAATAGTGTTGGTTTTCCAAATGGTATCCATGGTTCTGGTTGGGGGGCCGGTCAAGTTGTGAGACAGCTTGGTCCTCCTGAAATTCATGCTCCTAGGTTGTCCACCTCCGGTGCATTGTCGGTGCCGGAGCTGGCCAATGGCACGAGGCATGATTTTGTGCATAACAATTATCAGCACCAGCAACAGCAACGGAAGGCTCAGATGCAAATTGATTTCTCAGGAGCAACTTCAAGGGCTTCAGGGAGATCAATCATTGCGGAATCTGAGATTTCTGATGTTGAGGCATCGTGCAAGGAGGAGAGAACGAATGTTGCCGATGACAGGAGGCCGAGGAAACGGGGAAGGAAGCCGGCCAATGGAAGGGAGGAGCCCCTCAACCATGTGGAGGCAGAGAGGCAAAGGAGGGAGAAGCTAAACCAGCGGTTCTATGCCCTGCGTGCGGTTGTTCCAAATATCTCAAAGATGGACAAAGCATCTCTATTGGGAGATGCTATTGCTTACATCAATGAACTTCAAGCGAAACTCAAGACGATGGAGTCTGAGAGAGAGAGATTTGGAAGCACCTCTATGGATGGATCAGTGGTGGAGGCCAATGCAAGATCAGAAAATCATAGTAATGGAATTTCTGATGTGAATGTTGAAGCTGCACAAGATGGGGTGGTAGTAAAGGTGAGCTGCCCTATTGATGTTCACCCGGTTTCAAAAGTCATTCAAACCTTCAAAGAAGCAGATATTGGTGTTGTTGATTCAAAACTTACTGCTGCAAATGATACTGTTTTCCATACATTTGTAGTTAAATCTCAGGGACCTGATCAGCTGACCAAGGAAAAGTTGATTGCATTGTTTTCCAAAGAATCCAACCCCATACAGACATTGTGA


Promoter Sequence:
>Vu_36678::LG11:27684298-27686298(-)
TCGTCCATTCAACCGCTAGGACGTTCGGCTATTCTCAGTTCAAACGTTTGACCGTTCGTCCCCGCAGCTTTACCGTTCGGTCATAGTGTTTTGATGAACGTTCGGTCTCCATGATATTTGTCTTCAGCGTTCGTACTATTTGTGCTTATTTTCTCCAGCGTTCGGTTTTGAACGTTCGGCCTATTGTGGTGTTCAGCAAATAGCGTTCGGTCATTTTCTTATGTTAGTTGAACGTTCGGTCTTGTTACGTTTTTTCGTGTCCATAGTGAACGGCCGTTCTAGATGTTTTCTAGTACTCGTCATAGGCGTTTGGTGTTTTCGAGGCGTTCGTCCAACAGTGGGGCGTGCGTCTTTTATTTCGTTACACTTTATTTGTTTTAATAAAAAATATATAATAATAAAAATAATAAAAATATATAAAAATAGAAATAATAAAGAAAATAAATAAAAAAACAAAAAAAATCTGGAATCAGGAATATGTCTCCGAATTCCTGGAAAGTTGTCGAAAAAAAAAAAGGAAAAGAAGAGAAGACAAAACAGATCAGGGAATGTGTTTCAGTGTCGGGAACTCCTAGAAAGCAGTGAGGAGTTGGTTTTTCTTCAAAAGGGTTTGAAACTGCCCGTGCCCGTCCTCGCCACGTCACATTTGAAGCAGGTTTGATCAGATTTCCTCATATTGCAGCAGCTTTTTTCATTTAAAACGTGGCCCTCTCAAACGCTGACACGTGTGCTGTGTCGAAATGTTGTCAAATTTGGTTGTTCGAGTATCATTTTCCTAAACAAAATCATAATAATTTCACCTTTTTTCAATTGTACTACTATTACAAAATACAAATCTAATTAAAAAATAATAGTGTTTCTTGCTGCACTCTTAATCTACGATTTTGTTTGCCAGAATTCTAACCATTTTAATTATCATACTAAAAAAAATTAAAATTTCTCTAAAAAAACATAAATTAATAAACTATTATATATTTACTATACATAGCACATCCAATTTATATTCACACCAAGAAAAGTATATCACATAATAGTAATTAATAAACTATAGTAATCTATCATAAATATAGCACAACTAAGCTAGTTATCAATACCCGTATCCAAGGTGTTATATCTTCTCACAAGTATATGTTTATGGATTCCCCTATAAAGTAAACATTAATATTCATTTATTTCTTTAAAAATCTGTTTTTTTTTTACCAATTTTCTTCAATTAAGAAGATCTAAAAGAAAATTTAATATAACTTAAAATAAACTTTGCCTCTGAATCTCCCAACATTTTAGAAAAAAAAAACGAATCTAGTATAAGATGCACTATGTTATTTTCCTCCTGAATCTTATGACAGAGTTATAAGTTTACTTTGGAGGGAGTAAATAAAAGACAAAATAATGCAGAAAGAAGTTAGATAGAGTGTGCATTTTTGCGACTATATAGACATATTTGTTTCTTGTTTTGATGTTTTAATTTAGAAAAATTAAAATAAGTTGTGCAATGATTTTGAAATGAGAGTGAGAAAAGACAGCACCAAACCAACCAATTCCATCTTTAACATGCACACAGAAACACGAAATTCAACCATTCAGATTCATAACTGTGAGTCACATGTGAGGTATTGCGTGTCACTGTTTAGCACGAGTATCACGAATTTCATATACTACCTTAAACTCCAAGATTAACTTGTCCTTATCTACTTACACACTAAGTTATATAAGTACCACTGTTTTGTTTTTCATAATGGTTTCTCTCATTTATTACCACACATGCTAATTTAAATACACGTATTTTATTTATATCAAAACATTAATTACAATGAGTTTATTTAATATTTTTATTTTAGTGTATTGCAGGCTTCAGTACAAGACTAGTAGATAGATAGGAGCAAACAACCAAAACCACTACCTCTCAACTTCCAACCAAGTAACCCTGGTTAAACTTTAACCCTGGTTGATTTGTTTCGCACTTTGCAGTTACAACTTAGGAAGAAAGAAAGAGTGAGTTC


Gene Sequence:
>Vu_36678(-)
GGAGTTAGAGAACATAAGCCTGTTTGTTCATTCACACACTTCTCTCTTTCTCCCAAACTCTGAAACCTGTTTTTTTTTCTTTGTTCATTTTAAGAATAGGTTCACTGAGAAAACTGAAAAATCCCTTTTATCTTCCTTTTTTTTATTATCTGGTGGACGTGTTTTTTTTCCTTAGAGACATAGACACCCATTTGATAACTTGAACACTGGGTGTGCTCATAATGTTGTCTCTTGTTGAGTTGTTACTCCTTTGGACAGTTTTTAGGTTTTTTTGATTTTCGGGAACCCCAGGTTGAAATTCTGCGAGATCTGAGGTTTCTGGATTTGGGCTTTGAGAAAGTTGAGATTTTGTTGGGTTTTGGGATGAAGATTGAGGTGGGGTTGGGAGGGGTGTGGAATGAGGAAGAGAAAGCGACGGTGGTGGAGGTTCTGGGTCGCGGCGCGTTTGATTACTTGGTGGCGAATTCGGTTTCTAACGAGAATCTGTTAATGGCGTTTGGGAGCGGCGAGAATCTGCAGAACAAGCTTTCGGATCTCGTGGAGCGTACTAACGCGTCGAACTTCAGTTGGAACTACGCGATCTTCTGGCAAATTTCGCAGTCCAAGTTTGGGGATTGGGTTTTGGGGTGGGGAGATGGTTGTTGCAGGGAACCGCGGGAGGGAGAAGAGAGCGGAGAAGTGAGAGGGAGAGGGGTTGTTGCTGACGACGAGAAGGTGCAGAGGATGAGGAAGAGGGTGTTGCAGAAGCTGCACATGACTTTTGGGGGTTCTGACGAGGACAATTATGCTTTTGGGTTGGACCGTGTTACTGACACGGAGATGTTCTTTCTTGCTTCCATGTACTTCTCTTTTCCCCGTGGACTAGGGGGTCCAGGTAAGTGTTTTGCTTCTGGGAAGCATTTGTGGCTTTCGGATGTGTTCAAATCTAGTTTTGATTACTGTGTGAGGTCTTTTTTGGCCAAATCTGCTGGAATTCAGACTGTTGTTTTAGTGCCTACTGATATGGGGGTGGTGGAGATGGGGTCTGTGAGGATGGTGGGTGAGAGTTTTGAGCTTTTGCAGGCTTTGAAGTCTGTGTTTTCTGCACAGGCATCGTTGGTCCCTCCCAGGATTAAGCCAATTACACCATTTGATTTGGTGAGTGAGAAGAGAGATGATAATGCAAATGCCCCTTTTTCTGGTGTGGCAATTGGGGATAAGGAAAAGAATAACAGCAGCAATGGTAGTAATAATAGAGTAGAAGGAAACGGAGTTCCAAAGATTTTTGGGCAAGATTTGAACAGTGTGACTCAATTCAGAGAGAAACTTGCTGTGAGGAAAATGGAAGAGAGGCCGAGGGCGTGGGGAGCTCATCCCAATGGGAATAGTGTTGGTTTTCCAAATGGTATCCATGGTTCTGGTTGGGGGGCCGGTCAAGTTGTGAGACAGCTTGGTCCTCCTGAAATTCATGCTCCTAGGTTGTCCACCTCCGGTGCATTGTCGGTGCCGGAGCTGGCCAATGGCACGAGGCATGATTTTGTGCATAACAATTATCAGCACCAGCAACAGCAACGGAAGGCTCAGATGCAAATTGATTTCTCAGGAGCAACTTCAAGGGCTTCAGGGAGATCAATCATTGCGGAATCTGAGATTTCTGATGTTGAGGCATCGTGCAAGGAGGAGAGAACGAATGTTGCCGATGACAGGAGGCCGAGGAAACGGGGAAGGAAGCCGGCCAATGGAAGGGAGGAGCCCCTCAACCATGTGGAGGCAGAGAGGCAAAGGAGGGAGAAGCTAAACCAGCGGTTCTATGCCCTGCGTGCGGTTGTTCCAAATATCTCAAAGATGGACAAAGCATCTCTATTGGGAGATGCTATTGCTTACATCAATGAACTTCAAGCGAAACTCAAGACGATGGAGTCTGAGAGAGAGAGATTTGGAAGCACCTCTATGGATGGATCAGTGGTGGAGGCCAATGCAAGATCAGAAAATCATAGTAATGGAATTTCTGATGTGAATGTTGAAGCTGCACAAGATGGGGTGGTAGTAAAGGTGAGCTGCCCTATTGATGTTCACCCGGTTTCAAAAGTCATTCAAACCTTCAAAGAAGCAGATATTGGTGTTGTTGATTCAAAACTTACTGCTGCAAATGATACTGTTTTCCATACATTTGTAGTTAAATCTCAGGGACCTGATCAGCTGACCAAGGAAAAGTTGATTGCATTGTTTTCCAAAGAATCCAACCCCATACAGACATTGTGATATGGAGAATTGCAATTAACATAGTCCATAGCATGATACACATAGAAGAGCCAAATATCTTCATTGTCTTCAGAAATTTTGTTATACTATAGAGAATCTTAAAGTAAAGCAGTGGGAACTAGGAAAGTAGAATTACAGCTTCTATTAACCCTCTAGGGCAGTCAATTTATGTTTGTCTATAATATACACAGTTTATCATAAGAACTATCATTCCTGCTATGTCAATTATTTTGTTTAGTTTAACAGAACTACCATTTTACCTTCTTCATATCATAGCCTAATATAATCTCTCTCTTTTCTTTTTCTTTGCCTTTTTCTTGTATTCTATCTAGTCTTCTGCAGCAAAATATTAACTATTTGTCTGCTGATTTTTTC