Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_36569 LG11 26052004 26053426 hypothetical protein
Map

Annotations  
category   relationship type   keyword
Pathway   B 09132 Signal transduction   C 04016 MAPK signaling pathway - plant [PATH:ko04016]
SNP Position Effect Amino acid change
A/G 26052052 missense_variant p.Thr17Ala
G/C 26052064 missense_variant p.Ala21Pro
A/G 26052073 missense_variant p.Thr24Ala
C/A 26052090 synonymous_variant p.Thr29Thr
G/T 26052100 missense_variant p.Asp33Tyr
C/T 26052110 missense_variant p.Ala36Val
C/A 26052138 missense_variant p.Ser45Arg
C/A 26052146 missense_variant p.Ser48Tyr
C/T 26052156 synonymous_variant p.Asn51Asn
T/C 26052174 synonymous_variant p.Gly57Gly
C/G,T 26052201 synonymous_variant p.Pro66Pro
G/A 26052208 missense_variant p.Ala69Thr
C/T 26052363 synonymous_variant p.Pro120Pro
C/G,T 26052383 missense_variant p.Thr127Ser
A/T 26052683 intron_variant
A/T 26052864 intron_variant
T/A 26052900 intron_variant
C/A 26052947 intron_variant
A/G 26053271 synonymous_variant p.Gln268Gln
C/G 26053287 missense_variant p.Gln274Glu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_36569.1
MEPDWDLHAVVRSCTTTSSAAAATTTVSTTSSDFGASVPPSTSRSFFSVYNPAVQGGQVVSPLENPYGARPSIEELHELCKPFFIKPQPHTFQPSSPLSSFSYSSVSKSPCSQQEQKQPPQPGSASTPKQKRRKNQVKKVCDVAAGNLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNKSDPTMFIVTYTGEHDHPAPTHKSSLAGSTRYKPQTGGDTTTTKPVSPATSSEVAQHSTKSECIEEELEDLMKDDEEANEFDSTETVVSDDFFEGLEELTGSAIDPFTATSSIDRWSLANNATTAAGGS*


CDS Sequence:
>Vu_36569.1
ATGGAACCAGATTGGGATCTCCACGCCGTAGTCAGAAGCTGCACCACTACTTCCTCCGCCGCCGCCGCCACCACAACCGTATCCACCACCTCATCTGATTTTGGGGCTTCTGTCCCACCTTCTACTTCCCGCAGCTTCTTCTCTGTTTACAACCCTGCTGTACAAGGAGGTCAAGTTGTGTCTCCTTTGGAGAACCCCTATGGAGCAAGGCCTTCCATTGAAGAGCTTCACGAGCTTTGCAAGCCTTTCTTCATCAAACCACAGCCTCACACCTTCCAACCTTCTTCTCCTCTTTCTTCCTTTTCTTATTCATCAGTGTCCAAATCACCTTGTAGCCAGCAAGAACAGAAGCAGCCTCCCCAACCAGGTTCTGCCTCCACCCCAAAACAGAAAAGAAGGAAGAATCAGGTTAAGAAGGTTTGTGATGTGGCAGCTGGGAATCTCTCCTCAGACATATGGGCATGGAGGAAATATGGACAGAAACCCATCAAAGGGTCACCATATCCAAGGGGATATTACCGATGTAGCAGCTCAAAAGGATGTTTAGCCAGAAAACAGGTGGAGAGGAACAAATCGGACCCAACAATGTTCATAGTGACATACACTGGTGAACACGACCACCCTGCTCCTACTCATAAAAGCTCCCTTGCTGGCTCCACTCGCTACAAACCTCAGACTGGTGGAGACACAACCACCACAAAACCTGTTTCTCCAGCGACCTCATCAGAGGTGGCACAACACAGTACAAAGTCAGAGTGCATAGAAGAGGAGTTGGAAGATCTGATGAAAGATGATGAAGAAGCAAATGAATTTGACTCAACAGAAACAGTGGTATCAGATGATTTCTTTGAAGGGTTAGAGGAACTGACAGGGTCTGCCATTGACCCCTTTACAGCTACTAGTAGCATTGATCGGTGGTCACTGGCCAATAATGCTACCACTGCCGCTGGTGGTAGCTGA


Promoter Sequence:
>Vu_36569::LG11:26050004-26052004(+)
TCTAGTACTAGTCAGATTTTGTTGAGTCAAGCTTATCATATCATCTTGTATTATATGTTTTATGTAAGTGTAAGTTTTATTTTAAAAATCATATTTCTGGAGTGGAGTTAGAGTTCAAATTTATTTTTTAATACAAAATTTGATATATGAGATTTGTGGATTTATCCCACAGCTGGATTTTACTGATATTCCTTTTATTTTTCATATTTTTGATAAATTAATTTGTGAGATTAAGTTATATTTTAAATTTCTTTTCATAAAATAATATAAAATTTATTAAAATCAGGTAATCTAAAATAATGTATTGAAGATTTCTCATTCATTAAATATATAACCAAATATACACATATTAAACCTCAAATTTTAGTCAAACAAATTTTTACTGTCAATTTTTTTTTAATTCTCTAACTAAGTTAGCTCTGTAACAGACAACACAAATTTTCAGCATACTCTTCAAAATTATTCTTAATAGTACTCGATAAACTCTGCACATAAACTCACTATAATAAAAAATATTCTAAAATAATATTTTTTTTGCCAAAGTATTTTTCTCTTTTGAATTTTCTCTTTTTTATGGTCGAGTTGCAGGTTAGTACATGCATCAATCCAATTATTACCACTAAAATGAGATTTTCTTTTTTGCTGAATGTTTTTCACTTATTTTTTCTTTTTATAGCTATGTTTGTATATTGATGAATTTCTCTAAAAGTTCTCATACTAGTTATTTTTGGAGAATATTTAAACTTGAGAAAAAAACTTCACGACTATAGTCTTCACAATTGAACTAATTACCAATCCTTATTTTGCATAGAAAATAGACTAGATAAAACAATTTTTTTTTAATTTTATATTTGTATAAAAAATACCTGTATAATGTTATATTATATATAATTAATTTTTTAAATAGTTATTTATAAAAATTATTTTCTTGTCTTTTGTCTGAAATAAGATAAATGTTAAATAGTATTCTTAAAACGATTAAAAAATTAGTCATATGTAAAAAAAAAAACATTTTGAATAATTTTTAATTAAAATCCTTCCCTTCAATAGTATGATTTTTGTTTCTCTTCCTTTCCTTCTATGTGTTTTTTCACTTTCATCTCAAGAAGTTTTTACTACAATTTTGTCCTGTGTGAGCTGGCAACAGCATTCATATTTAATTATTTGTCTGCATATGAATTACTTTCAGTCACAGTCCCAAAGAGAAGAGATGCGTGCGGAACTGTGATTCTTTGCCATAATCCAAACCTAAAAGTCTCACCACTACCTTTGACATTTTAAAATGTCAACCCAAGTAAATCAAAAACTGCTTCCATAATAAAACAGTAATATAACAAAAGAAGAAGAGAAAAAAAGAAACACAAATCAGAAAGCACTTGAGAACCATCATACTTGGACATAGATACCAAATTCCTCATCTATTATCTCTCTTTGAAATATATAGTTACCAGTTATTTTGTTTGACTATAATATTTTTTTTAAATGATGTTAATTAATAATCTTCTAACAATCAATTGTATGTATTAACTCACTTCTTCTTTGTTACAATAAATATTTACATTAATATGTTTTTTCTTATATAAAGTCCTAAATTAAAGAAAAACACTAACATGATGTTTTTTAAATTTGGAAAGAGATAAGGACTTATTTGTTGGGTAATGATACTTGAACAACCATTTTTGACAATATTTAGACACGCGCACACGTATCAAAATCTGAGTGGTCTATTTTCATTTAATTTTTCCAATTAGACCACTCAGATTTTGGCACGTGTGCGCGTGTCTAAATGTTGTCAAAAATGGTTGTTCAAGAAACATTTTGCTTATATGTTTGTGAGTAGACTTTTGTTCAATGTCCACTTTCTCTTACTATCTATATATACATGTCTTTTCCTACTTATGGCATCTTATCTTTTTCTCCCTCAAACAAAAGTCAGCGCCTTTTTTTTTTCTTTGTCCTCTCTCAGTACCAGACTTTTTCAGACCTTGTCTTTACTGTTA


Gene Sequence:
>Vu_36569(+)
ATGGAACCAGATTGGGATCTCCACGCCGTAGTCAGAAGCTGCACCACTACTTCCTCCGCCGCCGCCGCCACCACAACCGTATCCACCACCTCATCTGATTTTGGGGCTTCTGTCCCACCTTCTACTTCCCGCAGCTTCTTCTCTGTTTACAACCCTGCTGTACAAGGAGGTCAAGTTGTGTCTCCTTTGGAGAACCCCTATGGAGCAAGGCCTTCCATTGAAGAGCTTCACGAGCTTTGCAAGCCTTTCTTCATCAAACCACAGCCTCACACCTTCCAACCTTCTTCTCCTCTTTCTTCCTTTTCTTATTCATCAGTGTCCAAATCACCTTGTAGCCAGCAAGAACAGAAGCAGCCTCCCCAACCAGGTTCTGCCTCCACCCCAAAACAGAAAAGAAGGTTAATATGCCCTTTTTCTTCCTTTTTATAATTCATGGAATGGGAATTAGATTCTCCAATCCAGAAAGATTTTGAATTTATTTAGCTCTTAAAAACCATGTCTTTGTGGTTCATTCATGACTTTGTCTGAAATGCATGTTTTTTTTTCAACCACAGGAAGAATCAGGTTAAGAAGGTTTGTGATGTGGCAGCTGGGAATCTCTCCTCAGACATATGGGCATGGAGGAAATATGGACAGAAACCCATCAAAGGGTCACCATATCCAAGGTTTACCTAAAAAAAATTTCGTCTTTTTTAACAATAAAAGTTTAATGGAGTAGTTAATTCCTAGTCTAAAATAAGAAAAAGTTTTAAACTCAAACAAAACTCACAAATACAATTATATTTTCTTTATCTCATAGATATGAATGGAAACTTGTGTGTACAATTTTTAAGAAGCCAGACTTTGACTTGTTACACTTTACCAAGTCTTTGTTGTTAGATTTTGCCTTTTTTTTTTAAAAGAAAGCCAAAAGGGGTTAAAGTTATGAACTTAAAAGAACCAACGAGACATTTTTTGTTGTGTGATTTACAGGGGATATTACCGATGTAGCAGCTCAAAAGGATGTTTAGCCAGAAAACAGGTGGAGAGGAACAAATCGGACCCAACAATGTTCATAGTGACATACACTGGTGAACACGACCACCCTGCTCCTACTCATAAAAGCTCCCTTGCTGGCTCCACTCGCTACAAACCTCAGACTGGTGGAGACACAACCACCACAAAACCTGTTTCTCCAGCGACCTCATCAGAGGTGGCACAACACAGTACAAAGTCAGAGTGCATAGAAGAGGAGTTGGAAGATCTGATGAAAGATGATGAAGAAGCAAATGAATTTGACTCAACAGAAACAGTGGTATCAGATGATTTCTTTGAAGGGTTAGAGGAACTGACAGGGTCTGCCATTGACCCCTTTACAGCTACTAGTAGCATTGATCGGTGGTCACTGGCCAATAATGCTACCACTGCCGCTGGTGGTAGCTGA