Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_36554 LG11 25835041 25840521 PREDICTED: mitogen-activated protein kinase homolog MMK2
Map

Annotations  
category   relationship type   keyword
Pathway   B 09132 Signal transduction   C 04016 MAPK signaling pathway - plant [PATH:ko04016]
SNP Position Effect Amino acid change
C/G 25835161 3_prime_UTR_variant
T/A 25835353 3_prime_UTR_variant
T/A 25835358 3_prime_UTR_variant
C/T 25835367 3_prime_UTR_variant
A/C 25835503 missense_variant p.Tyr372Asp
T/A,* 25835772 downstream_gene_variant
G/T 25835778 downstream_gene_variant
A/C 25835786 downstream_gene_variant
C/T 25836003 downstream_gene_variant
T/A 25836553 downstream_gene_variant
T/A 25836810 downstream_gene_variant
C/G 25837070 downstream_gene_variant
T/A 25837120 downstream_gene_variant
C/A 25837121 downstream_gene_variant
G/A 25837223 downstream_gene_variant
C/T 25837296 downstream_gene_variant
C/T 25837387 splice_region_variant&intron_variant
G/T 25837400 synonymous_variant p.Val251Val
G/A 25837502 synonymous_variant p.Thr217Thr
G/T 25837732 splice_region_variant&intron_variant
A/T 25837830 downstream_gene_variant
T/A 25837835 downstream_gene_variant
T/A 25837985 downstream_gene_variant
T/G 25837989 downstream_gene_variant
A/T 25838004 downstream_gene_variant
G/T 25838187 downstream_gene_variant
A/G 25838201 downstream_gene_variant
A/T 25838205 downstream_gene_variant
A/G 25838241 downstream_gene_variant
C/G 25838288 downstream_gene_variant
A/G 25838316 downstream_gene_variant
C/T 25838381 downstream_gene_variant
A/G 25838386 downstream_gene_variant
G/T 25838415 downstream_gene_variant
G/C 25838540 downstream_gene_variant
T/C 25838581 downstream_gene_variant
T/C 25838614 downstream_gene_variant
C/G 25838743 downstream_gene_variant
T/C 25838799 downstream_gene_variant
T/G 25838850 downstream_gene_variant
T/A 25838879 downstream_gene_variant
A/G 25839077 downstream_gene_variant
T/G 25839152 downstream_gene_variant
C/T 25839368 missense_variant p.Ala55Thr
A/G 25839369 synonymous_variant p.Ala54Ala
A/T 25839372 stop_gained&splice_region_variant p.Cys53*
G/A 25839627 downstream_gene_variant
C/T 25839728 downstream_gene_variant
A/G 25840095 downstream_gene_variant
T/C 25840097 downstream_gene_variant
C/T 25840103 splice_region_variant&intron_variant
G/A 25840173 synonymous_variant p.Phe31Phe
C/A 25840197 missense_variant p.Gln23His
T/C 25840204 missense_variant p.Tyr21Cys
A/C 25840426 5_prime_UTR_variant
C/T 25840427 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_36554.1
MSGVESDHNNIKGVPTHGGRYIQYNIYGNLFEVSRKYVPPIRPVGRGAYGIVCAAVNAETGEEVAIKKVGNAFDNRIDAKRTLREIKLLRHMDHANIMSIRDIIRPPQKENFNDVYLVSELMDTDLHQIIRSNQPLTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIADFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIITRQPLFPGKDYVHQLRLVTELIGSPDDASLGFLRSDNARRYVKQLPQYPKQNFSARFPIMSPGAVDLLEKMLIFDPNRRITVDEALSHPYMAPLHDINEEPVCTRPFSFDFEQPSFTEEDIKELIWRESVKFNPLPPVY*


CDS Sequence:
>Vu_36554.1
ATGTCTGGTGTTGAGTCTGACCACAACAACATCAAAGGGGTACCAACTCATGGTGGACGCTACATTCAGTACAATATCTATGGCAACCTCTTCGAAGTTTCCAGAAAGTATGTCCCTCCTATTCGCCCTGTGGGTAGAGGTGCTTATGGTATTGTTTGTGCTGCTGTAAATGCGGAGACAGGAGAGGAAGTTGCCATTAAGAAGGTTGGCAATGCATTTGACAACAGAATAGATGCCAAGAGGACCTTGCGAGAAATTAAACTTCTTCGGCACATGGATCATGCAAACATTATGTCCATTAGAGATATTATACGACCTCCTCAGAAGGAAAACTTCAATGATGTATACCTTGTTTCCGAGTTAATGGACACAGATCTCCATCAAATAATACGTTCCAATCAACCACTGACTGATGATCATTGTCGGTATTTTCTGTATCAATTGCTTCGAGGACTCAAATATGTACATTCAGCAAATGTTTTGCACCGTGATCTAAAGCCTAGCAATTTGCTATTGAATGCCAATTGTGACCTTAAGATTGCCGATTTTGGCCTTGCTAGAACTACATCTGAAACTGATTTTATGACTGAGTATGTGGTCACTCGATGGTATCGAGCTCCCGAGTTACTTCTTAATTGTTCGGAATATACCGCAGCCATTGATATATGGTCTGTTGGTTGCATACTTGGAGAAATCATAACAAGACAACCACTCTTTCCTGGCAAAGATTATGTTCATCAGCTGAGACTAGTCACAGAGCTGATTGGTTCACCCGATGATGCTAGCCTTGGATTTCTACGAAGTGATAATGCTCGTAGATATGTAAAACAGCTTCCTCAGTATCCAAAGCAAAACTTTTCTGCTAGATTTCCCATCATGTCTCCTGGTGCTGTTGATTTGCTAGAGAAGATGCTTATCTTTGATCCTAACAGGCGTATTACAGTTGATGAGGCATTGAGCCACCCATACATGGCACCTCTCCACGACATCAATGAGGAACCTGTTTGCACTAGACCCTTCAGTTTTGACTTTGAGCAACCGTCATTCACTGAAGAAGATATCAAGGAACTCATCTGGAGAGAATCTGTGAAGTTCAATCCTCTTCCACCAGTCTACTGA


Promoter Sequence:
>Vu_36554::LG11:25840521-25842521(-)
ACTTTATTATGGATGGAAACAGATGAAGCTTATTAATACCTTCTGTTATATTGACCTGTCGATTGACATTGTCAAATTGCTTTTACCCTATGACAAGTCAATCTGGCCCGTTATTCAATCACTTTATCATCAACCCCTGTTCTAAGTTATTCTGAAGATCTGTTTTCAGTTGATTCGTCGTTATTCGTGAATTAATAATTGTCAACAATAATATAATTTTCTATCTTTACTCGTTTTTGGAAAATCTTTCACTTGCTACTTTTATGTGTCACTATAGTCTGTAAACTGTATATTGTATCTGTTCATAACAAAAACATATGGTCTAAAGTAACCGAAACTGATATTTTCTTATGTTAAAGTCGCAAATTGTTTTCAGTACAACTATGATATCATAAGGGATTTTCCTATAATTTATAGTTTGATATTTCTTTATGGTTCTTATTGCTGTTAGCATATTATTGTTAGATTCTATCTCAAATTCTGGACAATAGAAACCACGGAATGAATGATAATGTCAATTGGATAAAAGCCTCCAGAGTATCAGAGTTTTCAGATGAACATGACAGCCTATGTTTCCGAGTCATGTCTTATGGATTTTGTCTCTATTCATTTTTGGACCACAATCTGGGAAAGTTTCTGTCTTTGCAAATTCCATGATCACACTTGGGCCAGGGATAAAAACAAGGACCTAAAGCAAAGTCTAAGAAAGAAACCGAAGACCAAGTATTTGGCATATAAAGAAACACAGATTTTGATTAAAATAAACATTGACTGTAAAATTTACTCATAATTTGCATCTGGTTTTCAGAGAATCCATTCCTGATAACACCACTTTTAGCAATCTTGTAAGTAAGTTTGGGTGTTCAAAATAAAGAGTAAGCCAATTCTTGTTTGTGCTATGTTGACGATGACTTGGACTTGTATTTATTTCACAAAAAAACCAGAAATTTCATTGACTTGACTTTGATCGGTGCAAAGCAAATTACTTTGACAATTTATGAAAATATGGTAAATACAAAGTCGGTGTTTTGTAGAGTAGAATGACGTTTCTTATAGACTTTTTACGTGGTCGTTACTTTACATGATAGCAGAGATGTCAAAAAAATTGTTTAACTAAAATTGAATGATGATACAATTTCTAAACTATGAACTGACATACGTATAAATATTGTTAATCTGAATACGTAGACATCTGAGACTTTCTATTAAATAGTTTTTATCAGTTCTTTTATAAAATTAATGTTATAGTGTTATTTTGATGTAAGAAATATAGACCATGTTGGTTGTGCATTATTGGAGTAATCGAAATATTTCATTTGTTGTAAATGTTTGAAATATTTCGCAACATAAGAAAAAAAAACTAAACACGTGGCTATATATGACAAGCTGGTTATATATTTCCAAATATAAAAAATAGTGGTGTTCTTCATCACCCATGACTATTGTTTTAATCTTTACCTTATTTCTAAACTTCCTATTAAATTCCATACCACGAGTTTGAAGATAATAATAAAAGATCTTGTACTTGCATTGAAATTGCATAAACCAGTTTCAAAGTTGGAGCTTGAATTGACCAAAACAGAAAATGTTGAAGCTTTGCTGTCTTTTTTTCCTTTTTGAATTTAATAATACTTTACTTGAAGTAAACAAAGCAGCATATTGATATTTATGCAATTTTTTAACACCAGAACCATAACATTATTCATTGAGAAACAGTTCATTTTAATTTTTGTATATACACTTTTTCGTTTGAATTGATTTTAAAAAATTCTGTACTACATAAATTAAAGCAATATACATAGAAATCAGAATAAATAACTTCTAAGTGAATTAAAAGAATAATTTTGGGATGTAATAGCAGATATAGAACTAAATATGTAATTAAACCTATAAAAAGTAATGTAGACACAACTATGATTTTCGAGGAAGGAAGATGAATTTGAACAAAAAGGGTAATCAAAATAATAAACAAATGAGGAAGAAAGGATTGGAAATGGAAA


Gene Sequence:
>Vu_36554(-)
ATCACAGACAGCACACCAACGTTGATGAAAAAAAGTGAAAAGAAAAGTCAATAAGATCACGGGTTCACACATGCGTGTCCGCTAGAAAAGCCTCGTACTCTTACCACTCTTTCTCTCTCTATGTCTTGAAACCGAAGTGCCTCAAAGTTAGCTCCTTTTCCACTCTGAATCACTCTATTTATATTGGGTCTTTCCTCTGGTTCCTTCTGAGTTTTTGGGTTTGAATTGAGTTGGGAAGAGGTCGTAGATACAAGACATGTCTGGTGTTGAGTCTGACCACAACAACATCAAAGGGGTACCAACTCATGGTGGACGCTACATTCAGTACAATATCTATGGCAACCTCTTCGAAGTTTCCAGAAAGTATGTCCCTCCTATTCGCCCTGTGGGTAGAGGTGCTTATGGTATTGTTTGGTAAGTCAAAAGTCCCTTTCTTTTCTGGTGTTTTCTTTTGCTGAATTTATTACATTTGTTTTGTTGTGTGTTGCCTTTTGGGTAAAGGGGTTTTCTTGCTTTGAGCTATGTTGCTGTACTTTCCTATTCTGGTCTAGGATTAGCTGACTTTAGGAACAACGATTTTGTTACTGATCAAAACCCTTTTGTTAAGAATTAAGTAATTAACTTCCTTTGTTTTTGAATTCTGTCGTTCTTTTGTTATGTTTGGTCTGGTTGTTGACTTATTGAAGATTGGATTGGTTATTTTAGTTTGATTCTGAGGGAGACCAGTTTTGAGCTCAAATTGTTGCATTTTTCTTGTTTTTGATGTACAAATTGCCGTATCTTGATGGGATTCGTGTGTTACTCGTTCTCAGGCACTGTTTTTGTAGATTTTAAAATGTTGGCCAAGTGCGTAGACTTTCAAATCTCTTCCAATTTTGTTTTTTTATGTTTACTCAGTTGTTCATACTATAATTTTGCTGGAGTCAAAATGGAAAAACGAGATTAGATCATTCCTTTTTTGTGTCTGTGTGCTCCTGTGATACTGATGCTGTTAACAGCGTAGTTCTTTGTATTTCAAGATTCAATTGCACGGAGTACAATGTATATGTTCTGGATTGTGTATTAAATTTTGGGTCTGACTAGGAGTTCACTTTATTTTCTGTTATCAAAGATGTGTAGAACACTAACAATTTTTTTTGTTTCCTTCAGTGCTGCTGTAAATGCGGAGACAGGAGAGGAAGTTGCCATTAAGAAGGTTGGCAATGCATTTGACAACAGAATAGATGCCAAGAGGACCTTGCGAGAAATTAAACTTCTTCGGCACATGGATCATGCAAACGTAATTTTGATGCTTTTTACTTGCACTCATCTACAGCTTGTTTTCTTCCATGTTATTGTTTATTTGAAGTATTTACTTTCCTGTGAGACTATGTGAATTTTATTTGTCCTATTATTACTTTCTTTCTTCAGTTTATTCTTTGTTTCTTCGCCATTGTCCTATGATTACTGCTTATCAATTATTTTTTTCAATGCAGATTATGTCCATTAGAGATATTATACGACCTCCTCAGAAGGAAAACTTCAATGATGTATACCTTGTTTCCGAGTTAATGGACACAGATCTCCATCAAATAATACGTTCCAATCAACCACTGACTGATGATCATTGTCGGGTTAGCACTTTAATTAGTTTTAGCTTATGACTTTTAATCTGTGTAGTTTGAAGACTTTATAGCAAACAGCTTTATTAATGTACTCTCTTTTGGTTGTATAGTGACACAAACTGGAGATAAAGCCAAAAATAAAGTGCTTAGTAGATATTTTGAACATAAATCTGTGTCGAGTATGCTATACTGCACGTGTGTGAAGTAGTTCCATCTTAGTTTAATAGGCCTGAGTTTTTTATTCATGTTAAACTAAATTAGTGTCTTGTTTGCAGTTCAATGTTCTACGCTGCAACAGCTACAATACTGTAGTTGCATTGTTGTTACTTTCTGCAAAGTTTTACTTCCAATATCATGTCAATGGCGTAAATTAATTTCTTTTAGCATGCTTTAAACTTGAGCCAACTATTGAATTTGCACCAGACTTGAATTTGTGCCTCTACAATGATACATATTTTCTTATGGTCAGGATTTGAACAATAACATTGTGCATGGATAATACCTTACCTGATTACTCTCTTTTACTTTGCATATAAGCATTATATGGTAGCCACTCTCTAAAGTTTAGACCTATTATTAACTTTTATCTGAGGTATTCTTTTGATGAAATTTTTCCTCCATTCTTCTACGTATTTTTGGTGTTGATTTGTGACTTCATTTCATTGTTATTAATAAATTCAATCATTGGAAAGATTATGCTTTCGTTTTCATCTGTATTAATATTTGTGGGCAAAATTTTGTTCTCCAGTTATTGGAAAAATGTGATATAAGTCTGAGCTGAATGTGTATAATGTTGTTCTTCGCTTCCTCTACAAAAGACTATAGAAAATATTTTAATACGAATTTGTTTTATAATTTACATTGATATACTGATTTACCTTGGAATTTTCTTAGTAATTTAATCTTCTTGCTTTGGTTTAAATTGGTTAATGACATTCGATGTTTTATGTATCAAATCAATAGGTAAATTGTAATTATACTTATGAACATCCTGAAGAGCCTGGAACCTTGGAAGACTGAATGAAGCTCAGTCCGTGTACTAGGTGGTGTCGGTCTCCTATCTTGCTTGTGGGGTCCACATCATCTATTACACTGCTTGGACTTAGTGTGGTCTTTAAGGCTTCTGGCAGTGTAGCATGTTTTTTTTTATATTTCTTACAGTAACTCTTAAGTTCTTTCTTTTTTCCCCAGTATTTTCTGTATCAATTGCTTCGAGGACTCAAATATGTACATTCAGCAAATGTTTTGCACCGTGATCTAAAGCCTAGCAATTTGCTATTGAATGCCAATTGTGACCTTAAGATTGCCGATTTTGGCCTTGCTAGAACTACATCTGAAACTGATTTTATGACTGAGTATGTGGTCACTCGATGGTATCGAGCTCCCGAGTTACTTCTTAATTGTTCGGAATATACCGCAGCCATTGATATATGGTCTGTTGGTTGCATACTTGGAGAAATCATAACAAGACAACCACTCTTTCCTGGCAAAGATTATGTTCATCAGCTGAGACTAGTCACAGAGGTATTAGTTTGATATCATACTTCTGATTACTAGCATAAATCTATTGAGACTGGCTATGTTCTTATTTATTTGTATTTCTTTTGTCTCTTTTAGATCTGGAAGTTGGATCTACTTGTAAATTAGAGTTCCAACTTCTACAGCTTTATGCAATTGTGAATTGTGGGTGTCAACCTTTGGTGAAATGCTGTTGGTACTTTGATTATTTGAACCTTTTGTTTATTTCCATCAAATTAGTATGATAGGATTTGGGGAAAATTCAAGGCAAAAAAACTGAGTTTTTGAAGGATTGAATATTTTAACTGTCTGTCCAACGATTCAGGTCTGGTGGCATAAGAATTTTATTCTGAAATAAAATAATATGAAAAGAAAAAGCTGTGCACCAGTCATGTCACTTGTGCCCAAATGCACCACATCAGTTAGATTTTGGATCTTTATACTAATGTCTTCTGGATTTTACAACCTGTATTACCATGTGGAAATGTAGAATTGCAAAATTGTATACCAGTTTTGAAGTTCTGAAATGTTATAGGTTTTTATTTATGGACATGGTATTTGTGGTCCTTGTCTTTATAGTAGTTTTACTAGTAGAGTAGACCATACGATATTGTTGTCGAAAAACATTAAATAATTGTATTCTCTATGACTACTTTTGTACCCTTGATTTCTTTTGGCGTTTTGAGAACCTAAAGAAATCATATATGTAAGAAATGAAAATTGATTAAATTAAGAATGCTTGTATAGTCCCTGACCCATTCTGTTCTAGCAGTAGATTCAGATTATACAGTTTCCTGGTAGAATGTAAAGTTTCTTTCTTTCATGCTTTTTAGATCTCTTACTTAAACCTAACACTGCAATGACAATTCTCATTTCTTTCAAAAAGCTGATTGGTTCACCCGATGATGCTAGCCTTGGATTTCTACGAAGTGATAATGCTCGTAGATATGTAAAACAGCTTCCTCAGTATCCAAAGCAAAACTTTTCTGCTAGATTTCCCATCATGTCTCCTGGTGCTGTTGATTTGCTAGAGAAGATGCTTATCTTTGATCCTAACAGGCGTATTACAGGTATTCATCATGCAGAACTATTCCCCCAGTTTTATGAATAGCTGTGACTTTTATTGTTCTTGGAGCAGTATATGAATTGGAATGATACGGAGACAGATGTGAAAGACAAAAGTTATGAACTTTAGCACCAATAAGTACCTCATGAAAAAATAAACAGAAAAATAATTAAAATATGAGGTTACGAAATAAAAATCTTACAATTTTTTCCAATTTTGTTTTGAAGGGTACCCTTGTAAGTCTGTTTAGTGTTTTCTGGCCTAGAAATCATTTCTCAGTTTAGAACAACCAAATCAATGAAAAGTTTGTTTGTGGTTTAAGCGCCCTATGCTCTTTTTTTTTTTTTTTTTTAAATTTGTACAGGTATCTTGAACCTGTTACAGTATCAGTTTTTGTGGTGTGGTTCTCCCAAGGTTCTTATCATAACATTAGAGTAAAGCAACTAGTTTTGTGAAGTCATTTAAACTCTATTTTGTTTCTCGTGTTTCTGAACAATATAATACCAGAAATGATGATAATGATGAGATGGGGATACAGTGATTTCTGTTAGATGTCTTTGTACAAATATTTTACTATGAGAGTGTTCATATCTATTAATGACGAGATTCTCTTTTGTCTATATTTTTATTAACTGTATCCTATTTCTTAATTCTTTTCAGTTGATGAGGCATTGAGCCACCCATACATGGCACCTCTCCACGACATCAATGAGGAACCTGTTTGCACTAGACCCTTCAGTTTTGACTTTGAGCAACCGTCATTCACTGAAGAAGATATCAAGGAACTCATCTGGAGAGAATCTGTGAAGTTCAATCCTCTTCCACCAGTCTACTGAGATTTTGTTTTTATGTTGTATATGCTTAGTGAAATACCTGATAACTAATATACGTTATGACACTACTTTGGCAAGTTGCAGAGCACCACAGAACATGAAACATATTGGACATATCTGAGGTTGTTATGAGGTTTCTTTCATTTCAGTCTCATCTCAGATTCTTGGATAATCATATTGTTGTGATGTACTGAGGAAAGGATCAGAAGATGTGCAGCTTTACTCAGTTTTTCAGCTGAATATTCTTGAGCTCCAACTCCTTGTTGCACTTCTATCCTTCAGTTTAGACTCGAGGACGACGCACTGAATTCATCTTGCCAGTTTTTTCATCATTTACACGATGATAAATACATAACTTTTCATTTGTGTGGACAGAGATTATCCCATATTCCCATTGTATGACATAAAATGTAATGGTTTGTTTATTAGTATTCGAATAATTTAAAAAATTTCTTAAGTC