Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_36527 LG11 25542955 25546296 PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 2
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   protein phosphorylation, protein phosphorylation, protein phosphorylation, pollen development
Cellular Component   located in   chloroplast, cytosol, chloroplast
Molecular Function   enables   protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity
SNP Position Effect Amino acid change
C/G 25542984 5_prime_UTR_variant
A/G 25543012 5_prime_UTR_premature_start_codon_gain_variant
C/G 25543298 upstream_gene_variant
T/A 25543373 upstream_gene_variant
G/A 25543449 upstream_gene_variant
G/A 25543622 upstream_gene_variant
G/A,T 25543660 upstream_gene_variant
G/T 25543706 upstream_gene_variant
G/T 25543781 upstream_gene_variant
C/T 25544105 missense_variant p.Arg99Cys
C/A 25544218 synonymous_variant p.Ser136Ser
A/T 25544373 upstream_gene_variant
A/T 25544376 upstream_gene_variant
A/T 25544381 upstream_gene_variant
G/T 25544384 upstream_gene_variant
T/C 25545044 synonymous_variant p.Asp308Asp
A/C 25545217 upstream_gene_variant
C/T 25545239 upstream_gene_variant
A/T 25545310 upstream_gene_variant
G/A 25545343 upstream_gene_variant
T/A 25545451 upstream_gene_variant
G/T 25545764 missense_variant p.Glu419Asp
C/T 25545765 stop_gained p.Gln420*
A/C 25546084 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_36527.1
MSSPYPPSRRSGSDYSRTPGRVPPSPGYASSELSTSTISERQNPVVAAARSFTGMFAACFASPESDNSRSLGDSEEFKSSSTASNGSRAGSRAGSQRGRNSNGGMNISSYNIVQRKEPGIVKFTMEEIFQVTRNFSPSFKIGQGGFGAVYKAKLLDGTVVAVKRAKKSLYEKHLGVEFQSEIQTLSKVEHLNLVKLYGYLDQGDERIIVVEYVPNGTLREHLDCIHGCVLDLAARLDVAIDVAHAITYLHMYIDHPIIHRDIKSSNILLTENFRAKVADFGFARQAADSDSGMTHVSTQVKGTAGYLDPEYLKTYQLTEKSDVYSFGVLLVELVTGRRPIEPKFELKERITAKWAMKRFMEEDAISVLDPRLDQTAANTLALHKILELALQCLAPRRQNRPSMKRCAEILWSIRKDFREQLSASNFRSFSTSSQRSTSLRE*


CDS Sequence:
>Vu_36527.1
ATGTCTTCTCCATATCCCCCTAGCCGGCGATCCGGCTCCGACTACAGCAGAACGCCGGGAAGGGTGCCCCCTTCTCCGGGCTACGCCTCGTCCGAGCTCAGCACCTCCACAATCTCCGAGCGCCAGAACCCCGTCGTCGCCGCCGCAAGGTCCTTCACCGGAATGTTCGCCGCGTGCTTCGCGTCCCCGGAATCCGACAACTCCAGGAGCCTCGGGGATTCCGAGGAGTTTAAGTCTTCTTCCACTGCATCGAATGGCTCCAGAGCTGGTTCAAGAGCTGGTAGTCAGAGAGGGCGTAACTCAAATGGAGGTATGAACATCAGTTCATACAACATAGTACAAAGGAAAGAACCTGGCATTGTGAAGTTCACCATGGAGGAAATCTTCCAAGTCACAAGAAATTTCTCCCCTTCTTTCAAGATTGGCCAAGGTGGTTTTGGTGCTGTGTACAAGGCAAAACTCTTGGATGGGACTGTTGTTGCAGTAAAGCGTGCGAAGAAGAGTCTATATGAGAAACATTTGGGAGTGGAGTTTCAGAGCGAGATCCAAACACTATCCAAGGTGGAACATTTGAACTTGGTCAAGTTGTATGGATATTTGGACCAAGGTGATGAAAGGATCATTGTTGTTGAGTATGTTCCAAATGGAACCCTCAGAGAACATTTAGATTGCATTCATGGGTGCGTTCTGGACCTTGCTGCACGTTTGGATGTAGCAATTGATGTTGCTCATGCTATCACCTATCTTCATATGTATATAGATCATCCTATCATTCATAGAGACATAAAATCTTCAAACATTCTTCTCACTGAAAATTTTCGAGCTAAAGTAGCAGACTTTGGTTTTGCTAGACAAGCCGCAGACAGTGACTCTGGCATGACACATGTCTCCACCCAAGTCAAAGGAACAGCTGGTTACTTGGATCCTGAATACCTGAAAACTTATCAACTAACTGAGAAGAGTGATGTGTATTCATTTGGAGTTTTGCTTGTTGAACTTGTCACAGGCAGACGCCCCATTGAACCAAAATTTGAACTCAAGGAGCGAATAACAGCAAAATGGGCTATGAAGAGGTTCATGGAGGAAGATGCTATCTCAGTCTTGGACCCAAGACTGGATCAGACTGCCGCAAACACTTTGGCACTGCATAAGATTCTGGAGCTAGCTTTACAGTGCTTGGCTCCACGTAGACAAAACAGGCCTAGCATGAAAAGATGTGCCGAAATCCTTTGGTCCATCCGCAAGGATTTCAGAGAGCAGTTATCAGCTTCAAACTTCCGCTCATTTTCCACTTCTTCCCAAAGGAGCACCTCACTGAGAGAGTGA


Promoter Sequence:
>Vu_36527::LG11:25540955-25542955(+)
GTCCTCAACTTATTATAGAATTCCATCTGTATCCGAGCTTAATACAGTGCTTTACCACTGAAAATAAACTAAGCGTATTCGATTCCAATCATCCAGTATTCGATTCCACGCTTGGGTAGGATTCACAAAGAAGCAGTATTCGGTTCCAAGCTTAGTTGTATTTGGTTCCCCCATTCTCGCAACAATGTTGTATTCGGTTCCAACCTCTGATTCCATGTTTGTGTGCCTTCAGTTGGACGCGTTGTATTCGGTTTCTTCTAGCATTGTAGGCAAGCTGGGTGTGAAGGTGGAGGCGACCTGAAGTTTTATGAAGGAGGAGTTTTGGTGGACGACCGATATGTCACCCAGGTGGACGATCAGCCTTGACCCATGATTCGTGATGGTAAAGGATGCAGAGAGCTCCATCCCATGCTCCTTCAAGCAGTCATCGAAGCTGGAGAAGGAGACCAAGCTGGACATGTGTGCGTCGATGTCATAGAAGAGGGTCTCGTCGACGAGCTCTTGTTTGGAAAAGCGACGCGTAGTGGATGGAAGGTGAAAGGTGTAGAGGAGAGAGAAGAGGACGGAGAAGATCTCCAGGTCACAGTGGACGAAAACTGGGTTCAGATCAGCCGGACGCCGATTCGAGAGGGCAAAGAGGAGAGAATCAGGGCCACCGGAGCGAAGCATGGATAACATTGTCTCAAAGTGCTTTCCACCCACGTTGAGCTTTATGCACTCATTTGCAGTGTCGGATTCCATTGGAGTGCTTTCTTCCTCCATAATCGAACAGAAAAAAAAAGAAACGAACAAGGTTTTCTTCTGATTTTTTCAAAGCTTTCTCATTAGTCATTTTTTTTTTCAAATATAAGACATAAATTATATGTAATTTCACTACTTATTTTAAAATTATTTTTAAAATTATATTAAGAAAAAATGATTTTATTTAATTAATTAAAGTATATTATTTTAAAGTATAGTGTAACATGTTTTCTATTTAAACTTTTATTATCAAAATAAAAGTACATTTTAATTTTTTAATTATATTAAGCTAAAATATGGTATTGTTTAAATAATTATTAATTAAAAATGTTTCGCGATCAAAATTAGTAAGAAACAAGTCTTATATTTATTATAAAAATTATATTTAAAATAAATTTATTTTACTAAATTATAATTTTTTACATTTTAAAAATTAGTTTTATTAATTATTTTTAATTTTTTACTCTTTATAAATATTTTTATAATTAAATATAACATTAACAATTATTATTTTATATTACTTTAATAACTAGAGACAATTTGATAATCTTTATTTTCTATCAATTAATTTTTTTTTAAATCTATCACAATCAATCAAATTTTACATTCATTCTCACAACCTTTACCTTCAAATCCACTCTCAATTACTTCCAAATCCACTCAAATAAACACAAAAAGTTTACCCTCAAATTCATTCAATCACTCCCACAAATCATCTCCTCAAAGTAAACACAACATTAATGTTATTGTCGAGTTTGGTTTTATTTTTAGTCTATATATAATTTTTTGTGCATTTTTTTACTGTAAAACATATAAATATCAAATAAAAAACTAGATATTAATTAATAATTCAATTAATAACAATAAACCTAAAATAAACAAGTATGGTAGGTTTTAATTTATAATATATAATAGTAAACTTTAAATAATTCAACCTTACAAAATTTACTTATCACATAATATTTATACTCATTTATATATTTTGTAAATTCATCTTATTTTTAACTAAATACTTTAAATTCTAATGATTTAATTATTAATTAGATAATATATATATATGATAATTGACAGTGGCTTTGTCTGTTGTAAGTTGTCAATGAATCACACGTAGAAACTGCGGTAGTAAAACAACGTTTTCAATACAAAAGAACCACCGAAATTGAAAACTTGGCTTAGGTAGCTTGGCTTCCACGGCGCATAATAGCGTCACCCACCGTTTATAATCACCAGACAAATTTGCAAAGTCTTCGTTTTTCTTA


Gene Sequence:
>Vu_36527(+)
ACTTCACTTCAGTTGACTCTCTCTCTTACCGACCCGCCATTTTTTTTCTCTCTCTCTAAAGCACAAATGTCTTCTCCATATCCCCCTAGCCGGCGATCCGGCTCCGACTACAGCAGAACGCCGGGAAGGGTGCCCCCTTCTCCGGGCTACGCCTCGTCCGAGCTCAGCACCTCCACAATCTCCGAGCGCCAGAACCCCGTCGTCGCCGCCGCAAGGTCCTTCACCGGAATGTTCGCCGCGTGCTTCGCGTCCCCGGAATCCGACAACTCCAGGAGCCTCGGGGATTCCGAGGAGTTTAAGTCTTCTTCCAGTACTAGTTCTTCCGTTTTCCCTTTTTTAAAGACAAGAAAACTTTGATACAATATCTTAAGTTTCTAGTTTTTCTTTTTCCTGTTAAAGATAGAGTTTTGCTTCGATTTATTTTCACCTTAAATGTCAGCAAAGGTTTTTAAGGTGAAACATCAATTCTAATCTAAAAAGATCTTGGAAGTTTGGTCTTTAGCTTTAGGAGGACGTGCGTGTGTACGCGCACGCACGCTCGTTCTTCTATGTTGTTCTGGATTTCGTAGTTTGAAATCGTGTGTGAAGAAGTTTGTCTTTTTAAGCTGCTGAGAAGAAGGGTAGAGGTGACAAGAGAATTTGAGATTTTGGTCTGAATCGTGAAATTGATCACGGTTTGGATTTTGAATTTTGATTATGGGTCGAGAATTTGTTTTTGGAATAAATAATTAAGTAAATCTGCATTTTTTTTGAACCAAGAATTCACTTTTGAAGTCTTCATTAATGTATTGCATTTAGGTCATGATTTGCATGGTTATAAAAAATAGTACACTGTAACCAAAAAAGATGTAGAATACAATTAGCATCTATACATGTATCGGAAACACAACAGGTTTTAAAGTTCTGTGGCTAAACGTTTGAGTTAAGGAATTTCTTAATTCCTTATATATACATTGCATTCAGATCACTAGTTTGCATATTTTTCTCTTTAGTGTTTTGTCATTATTGATTTCAAAGTGCTACTATATACAGGTAGATTTATCTTTCATGCTTATATATGGAATGGAGAAATTAAATGAATTATTGTTTATGTTTCATAGCTGCATCGAATGGCTCCAGAGCTGGTTCAAGAGCTGGTAGTCAGAGAGGGCGTAACTCAAATGGAGGTATGAACATCAGTTCATACAACATAGTACAAAGGAAAGAACCTGGCATTGTGAAGTTCACCATGGAGGAAATCTTCCAAGTCACAAGAAATTTCTCCCCTTCTTTCAAGATTGGCCAAGGTGGTTTTGGTGCTGTGTACAAGGCAAAACTCTTGGATGGGACTGTTGTTGCAGTAAAGCGTGCGAAGAAGGTTTTTTAAATCATTTCTAGCTATTTGCATGGAATGAGAATGTTAATGATAACAGTTAACAAACACTCAAAAGATATTTGTTAATTGCTTTTGCTATGCAGAGTCTATATGAGAAACATTTGGGAGTGGAGTTTCAGAGCGAGATCCAAACACTATCCAAGGTGGAACATTTGAACTTGGTCAAGTTGTATGGATATTTGGACCAAGGTGATGAAAGGATCATTGTTGTTGAGTATGTTCCAAATGGAACCCTCAGAGAACATTTAGATTGTGAGTTTCTCAAGTCTTTTAGCTATTGTCTGTTTGTGATTTGGCCTTGCTACAGCTTGATCAATGGACTGTTACAGGCATTCATGGGTGCGTTCTGGACCTTGCTGCACGTTTGGATGTAGCAATTGATGTTGCTCATGCTATCACCTATCTTCATATGTATATAGGTACAATTATAGTTATGTTACTCTAGTATTACTTGAGGGAGGGTAATACTTTTGGTTAGCAAATTGATGCTCTATTGACATATAGAATGATGAAAGAGAGTCTGATGTTTGTATATTGTGTTTCCTTTGTAGATCATCCTATCATTCATAGAGACATAAAATCTTCAAACATTCTTCTCACTGAAAATTTTCGAGCTAAAGTAGCAGACTTTGGTTTTGCTAGACAAGCCGCAGACAGTGACTCTGGCATGACACATGTCTCCACCCAAGTCAAAGGAACAGCTGGTTACTTGGATCCTGAATACCTGAAAACTTATCAACTAACTGAGAAGAGTGATGTGTATTCATTTGGAGTTTTGCTTGTTGAACTTGTCACAGGCAGACGCCCCATTGAACCAAAATTTGAACTCAAGGAGCGAATAACAGCAAAATGGGTGAGTACTGTGCACTATTTGCCTTCATTTTGTTATTTTTTGCTATCTAGCAGTTTCGCTGAATAGTTCAGCACCTTCTCTTCATGGTTACTCCTTCCCAATCCATGTTGCTCAACTCTGATTTTTAAAGAGGATTGAAGGGGCATTTGAAAGAGCTTACGACAATGCTCACAAATGTGACATTTCTATAAGCTCTTCTATTGAGTTAACAGACATGCATTGTCAGTTCAAATTTTGTTATGTTGTGAATCAAGCAGAAATCAATCAGTTAACAAACTTATCATATATGACTAGATGACAGTGTAAAAGACTTTTATAACTTGAATGTATGCATCATTAATTCTTTACTCTGACACATTCAATGGAACTTGTTTGGTGCAAATGCAGGCTATGAAGAGGTTCATGGAGGAAGATGCTATCTCAGTCTTGGACCCAAGACTGGATCAGACTGCCGCAAACACTTTGGCACTGCATAAGATTCTGGAGCTAGCTTTACAGTGCTTGGCTCCACGTAGACAAAACAGGCCTAGCATGAAAAGATGTGCCGAAATCCTTTGGTCCATCCGCAAGGATTTCAGAGAGCAGTTATCAGCTTCAAACTTCCGCTCATTTTCCACTTCTTCCCAAAGGAGCACCTCACTGAGAGAGTGACAAGGCTAAAGCTGCAACCTTTGCATTTGAAAATGTAAACACATTCTCAGATGCTCTCCTTCGAACCCATTCTTTTTTATTGGTCGAAATTAATGAACCTTTCTCCTGGCTATTATTAGTTTTCAATCAATAGAAAAGAGGGTGACTGTGATAGAGAATATGTTTCTAACACTCTCGGTGAGGACAGACAATGGCCTTGGGAGAAAAGAAAAACCACTGTTCTATTCTATGATAGGAAACCTTAGCACTTAGGATGTTTGGTCTTTGACTAGAGTGGCATGTTGAAATTGTACATGAGTCTTGGCTTGTGTATAGAAATGGGGGAGCATAATTCCATTAAAGATGAGTGCATTACTTCCGTAAATTGTGCATTTTTGTTCGTCTTTTCAGAAAAATTTGTATTCTATTGATTGAAAACATGATTGGTGTATTCTATTTGTGTATAATATTCCATTTTCAGCTC