Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_36524 LG11 25518026 25520518 PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/A 25518082 missense_variant p.Gln712His
C/T 25518248 missense_variant p.Gly657Asp
C/A 25518371 missense_variant p.Arg616Ile
A/C 25518497 splice_region_variant&intron_variant
G/T 25518551 intron_variant
A/T 25518587 intron_variant
A/G 25518590 intron_variant
C/T 25518593 intron_variant
C/A 25518599 intron_variant
T/A 25518602 intron_variant
C/T 25518605 intron_variant
A/G 25518611 intron_variant
C/T 25518614 intron_variant
C/A 25518620 intron_variant
C/T 25518635 intron_variant
C/A 25518638 intron_variant
C/G 25518644 intron_variant
G/A 25518984 missense_variant p.Pro512Leu
C/T 25518991 missense_variant p.Glu510Lys
C/A 25519001 synonymous_variant p.Val506Val
C/A 25519003 missense_variant p.Val506Leu
G/C 25519013 synonymous_variant p.Ser502Ser
G/A 25519014 missense_variant p.Ser502Phe
G/A 25519017 missense_variant p.Ala501Val
C/A 25519030 stop_gained p.Glu497*
C/T 25519034 synonymous_variant p.Gln495Gln
C/A 25519043 synonymous_variant p.Thr492Thr
C/T 25519061 synonymous_variant p.Gly486Gly
C/T 25519062 missense_variant p.Gly486Glu
T/A 25519068 missense_variant p.Lys484Met
C/T 25519072 missense_variant p.Glu483Lys
C/T 25519083 missense_variant p.Arg479Gln
A/T 25519133 synonymous_variant p.Gly462Gly
A/T 25519176 missense_variant p.Val448Glu
C/T 25519185 missense_variant p.Arg445Lys
T/A 25519189 stop_gained p.Lys444*
A/G 25519212 missense_variant p.Val436Ala
C/G 25519222 missense_variant p.Gly433Arg
C/T 25519229 synonymous_variant p.Ala430Ala
C/T 25519234 missense_variant p.Val429Ile
T/C 25519246 missense_variant p.Ile425Val
C/T 25519252 missense_variant p.Gly423Arg
C/T 25519303 missense_variant p.Val406Ile
C/T 25519321 missense_variant p.Glu400Lys
C/T 25519325 synonymous_variant p.Glu398Glu
G/A 25519338 missense_variant p.Thr394Ile
C/T 25519347 missense_variant p.Arg391Gln
G/A 25519356 missense_variant p.Ser388Leu
C/T 25519365 missense_variant p.Gly385Asp
C/T 25519385 synonymous_variant p.Gly378Gly
A/G,T 25519424 missense_variant p.Asp365Glu
C/A 25519426 missense_variant p.Asp365Tyr
C/T 25519428 missense_variant p.Gly364Asp
C/T 25519429 missense_variant p.Gly364Ser
A/C 25519435 missense_variant p.Cys362Gly
G/A 25519475 synonymous_variant p.Ser348Ser
C/T 25519485 missense_variant p.Gly345Glu
T/A 25519514 missense_variant p.Glu335Asp
C/T 25519528 missense_variant p.Gly331Ser
G/A 25519532 synonymous_variant p.Asp329Asp
C/T 25519540 missense_variant p.Gly327Arg
C/T 25519551 missense_variant p.Arg323His
C/T 25519560 missense_variant p.Gly320Asp
C/G 25519575 missense_variant p.Gly315Ala
T/C 25519590 missense_variant p.His310Arg
C/T 25519606 missense_variant p.Glu305Lys
T/C 25519615 missense_variant p.Ser302Gly
C/A 25519662 missense_variant p.Gly286Val
C/T 25519682 synonymous_variant p.Gln279Gln
C/T 25519696 missense_variant p.Glu275Lys
T/C 25519714 missense_variant p.Met269Val
C/T 25519718 stop_gained p.Trp267*
G/A 25519728 missense_variant p.Ser264Leu
G/A 25519733 synonymous_variant p.Ser262Ser
G/A 25519743 missense_variant p.Ser259Leu
T/C 25519760 synonymous_variant p.Gly253Gly
C/T 25519776 missense_variant p.Arg248His
G/A 25519788 missense_variant p.Pro244Leu
C/T 25519807 missense_variant p.Glu238Lys
C/T 25519834 missense_variant p.Ala229Thr
C/T 25519837 missense_variant p.Ala228Thr
G/T 25519841 synonymous_variant p.Pro226Pro
G/A 25519851 missense_variant p.Pro223Leu
G/A 25519852 missense_variant p.Pro223Ser
C/T 25519855 missense_variant p.Ala222Thr
C/G 25519858 missense_variant p.Ala221Pro
G/A 25519869 missense_variant p.Ala217Val
A/G 25519873 missense_variant p.Tyr216His
G/A 25519877 synonymous_variant p.Tyr214Tyr
C/T 25519922 stop_gained p.Trp199*
C/T 25519930 missense_variant p.Gly197Arg
G/A 25519944 missense_variant p.Ser192Leu
C/A 25519946 synonymous_variant p.Val191Val
G/A 25519949 synonymous_variant p.Thr190Thr
G/A 25519950 missense_variant p.Thr190Ile
C/G 25519952 missense_variant p.Glu189Asp
G/A 25519955 synonymous_variant p.Asn188Asn
G/A 25519970 synonymous_variant p.Phe183Phe
C/T 25519991 synonymous_variant p.Lys176Lys
A/G 25520101 missense_variant p.Ser140Pro
C/A 25520111 missense_variant p.Gln136His
T/A 25520488 missense_variant p.Ile11Phe
A/T 25520490 missense_variant p.Leu10His

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_36524.1
MFLFFLLFILILHTSSSSATILLQGNATLQSPNNTFQLGFFNFFRGPGPGPPKFYLAIRRTSLPNPNTIWVANRLHPSPTQAASSLELTPTGKLLLTHFNNTLWTAAGAATANLTLKLHDSGNLVLLTSDGVVSWQSFDSPSDTWLPGMNLTRFNSLTSWRTETDPSPGLYTLRLKPSFYGEFELVFNETVSYWSTGNWSNGTFLNIPEMTIPYLYAFHFAAPFSPAAAFGFSERAIETSFRPPTMFRLEPFGQVKQYSWNSQSGSWQMFWFKPESVCQVRGLCGGFGVCTGDTSKFCECVSGFEPLDGHGWGSGDYSQGCHRVDAGCDGGDGFEDLGAVRFGFGNVSLVKGKSRSFCERECLGDCGCVGLSFEKQSGLCKKFYGSLSDFRNLTADGESEVLHVRVPSGGSGRKVFDWKVLSGVIIGSVAVLGVVVVTLLVMVKRRVVGKKLEEDEEDGFVGVLNLRVFSYKELQLATRGFSEKIGHGGFGTVFQGELSDASVVAVKRLERPGSGEKEFRAEVSTIGNIQHVNLVRLRGFCSENSHRLLVYEYMQNGALSVYLRKEGPSLSWDVRNVEAVPSGGGESGTESGGKWFFPPWAAQQIIEGNFGEVIDKRLGNVYNIEEARRVGLVAVWCIQDDEAMRPTMGMVVKMLEGLVEVSVPPPPKLLQALVTGDSFHGVKAISGNGLSTGGSLSDGNLEVSTADSESYTGNVFSPLDVNVNANVSVR*


CDS Sequence:
>Vu_36524.1
ATGTTCCTCTTTTTTCTTCTCTTCATTCTCATTCTCCACACTTCCTCCTCCTCCGCCACCATCCTTCTCCAAGGCAACGCCACTCTGCAAAGCCCCAACAACACTTTCCAACTGGGCTTCTTCAATTTCTTCCGAGGCCCGGGCCCGGGCCCGCCGAAATTCTACCTCGCCATCCGCCGCACCTCTTTGCCCAACCCCAACACCATTTGGGTCGCCAACCGCCTCCACCCCTCCCCCACCCAAGCCGCTTCATCCCTTGAACTCACCCCAACCGGTAAGTTACTCCTAACCCACTTCAACAACACTCTCTGGACCGCCGCCGGCGCCGCCACCGCCAACCTCACGCTCAAGCTTCACGATTCCGGAAACCTCGTCCTCCTCACTTCCGACGGCGTCGTTTCATGGCAGAGCTTCGATTCCCCCTCGGACACGTGGCTCCCCGGCATGAACCTCACGCGCTTCAACTCGCTCACCTCTTGGCGCACGGAGACGGACCCTTCCCCGGGGCTTTACACCCTGCGGTTGAAGCCATCCTTCTACGGCGAGTTCGAGCTCGTCTTCAACGAGACCGTGTCGTACTGGTCCACCGGGAACTGGAGCAATGGGACATTCCTCAACATCCCAGAGATGACCATCCCCTACCTCTACGCCTTTCACTTCGCCGCGCCGTTCTCCCCCGCCGCGGCCTTCGGTTTCTCCGAACGCGCCATCGAGACGAGCTTCCGACCGCCGACGATGTTCCGCCTGGAGCCCTTCGGACAGGTCAAGCAGTACTCGTGGAACAGCCAATCGGGGTCCTGGCAGATGTTTTGGTTCAAGCCGGAGAGTGTGTGCCAGGTTCGGGGACTCTGCGGGGGGTTCGGGGTTTGCACTGGGGACACATCCAAATTCTGTGAGTGTGTGAGTGGGTTTGAGCCTTTGGATGGTCATGGGTGGGGTTCTGGTGATTACTCTCAAGGTTGTCACCGTGTGGACGCGGGGTGTGACGGGGGTGATGGGTTTGAAGATCTTGGTGCTGTGAGGTTTGGATTCGGGAATGTGAGCCTGGTTAAGGGGAAATCTAGAAGCTTTTGCGAGCGCGAGTGCTTGGGTGATTGTGGGTGCGTTGGGTTGAGTTTCGAAAAGCAGAGTGGGTTATGCAAGAAATTTTACGGTTCGCTTTCGGATTTTCGGAATTTAACCGCCGATGGTGAGAGTGAGGTTTTGCATGTTAGGGTTCCGAGCGGGGGATCTGGGAGGAAGGTGTTTGATTGGAAGGTTTTGAGTGGGGTTATTATTGGGTCGGTTGCGGTTTTGGGGGTGGTGGTGGTGACATTGTTGGTGATGGTGAAGAGGAGGGTTGTGGGGAAGAAATTGGAAGAGGATGAGGAAGATGGGTTTGTGGGTGTGTTGAATTTGCGTGTGTTTTCTTACAAGGAACTTCAGTTGGCGACTCGGGGGTTTTCAGAGAAGATCGGGCACGGAGGGTTTGGGACGGTGTTTCAGGGGGAGTTGAGTGATGCTTCCGTTGTGGCTGTGAAGAGGTTGGAGAGGCCAGGGAGTGGGGAGAAGGAGTTCAGGGCGGAGGTCTCCACGATTGGGAATATTCAACACGTGAATCTCGTGCGGCTCAGAGGGTTTTGCTCTGAGAATTCTCACCGGCTTCTTGTTTATGAGTATATGCAGAACGGTGCTCTGAGTGTTTATTTGAGGAAGGAAGGGCCTAGTCTGAGTTGGGATGTTAGGAACGTGGAGGCAGTGCCATCTGGCGGAGGAGAGAGTGGTACTGAAAGTGGAGGGAAGTGGTTCTTCCCACCATGGGCAGCGCAGCAGATAATAGAGGGAAATTTTGGTGAAGTGATTGATAAGAGACTTGGTAATGTGTATAACATTGAGGAGGCTAGAAGGGTTGGTTTGGTGGCAGTTTGGTGCATTCAAGATGATGAAGCAATGAGACCTACAATGGGTATGGTGGTGAAGATGTTGGAAGGGTTGGTGGAGGTAAGTGTTCCTCCACCTCCAAAGTTGCTTCAAGCTCTGGTTACTGGGGATTCATTTCATGGGGTGAAGGCTATTTCAGGCAATGGTTTGTCTACTGGTGGAAGCTTATCAGATGGCAACTTGGAAGTTTCAACTGCTGATTCTGAATCATATACAGGGAATGTTTTTTCTCCATTAGATGTCAATGTCAATGCCAATGTCAGTGTTCGATAA


Promoter Sequence:
>Vu_36524::LG11:25520518-25522518(-)
TATAAAAAATTTAACTTCTACATATTAATTTATTTGAAGTGAAATTTAGTCTCATGTATATACTTAGTTTATTTAAATTTTAGACTAAGGAATGCAACAAAAATATCAAACATGAAAACATTATTATTATAATATTCTATATATACTTTTAAGTTCTATTTATACCAACTAACCGAGAAACCCGCTGGCCAACCATTATATCGAACAAACGACTAAATTTAACCTACAATTTATATGCAAAGAGAATTAGTTCAACCCTTTTTTGTGAACTGAATACCGAACAGATCAGTTCACATTATCATGTCTATATACTTATATTTGTTATTTTGTTAATTAATTTTAATAATGTCTGAAAAATAGTTTCCTTGAACAGTACAGCTATTTACACGTTTCTGTGTAAGAACTTTTTGGTTTTGTTGGCTCTAACGTGTTTCTCAGTTTCTTCGGTCTTTCTATATTCTAATGGTCCCTTTATCTTTGCCTCCTATTTTTATTTTTATTTTTATTTCTTTATCTATAAATAAATGCTACATAAAAAAAATATATTTTTTTTTCCTCAAAAGCCTTTTTTTTCTAATTATTTTTTCCTTTCCTTAGTTGAAAACAGATAACTTGATGAGTGGACTTCAGAGCATTTGTCAGCCACCAACCTTTCACTCTCCACTTTGTCTTCTACCAAATTACTCTTTATCTTTCACTTTCACTTCCCCTTTATAAATATATATATATATATATATATATATATATATATATATATATATATATAATATAATAATAATAATAATAATAATAATAATAAATAAATATATAATATAATGCATAGTTCAACTTTTCAAATTCTTTTGAGAATAGAGGGGAAACATCATTATTTAAATCAAATATACTCAAGCATATGAAACATTTCCTCAGGAAATATATAAATTACTGAAATTTTACTCTATAATATGTTTGAGACAACTTATAATAATCAATCAAATGCTTTAGCTTTAGTATAAGTTAATGTGTAGTACTTTTTCGTAAGTTGAATTTAATTCATAAACAATTTTTTTTTCTAAAATTTTGTTATAAAATAATCTTCACAAATATATCTGATAGAAAAATATCCTTATTTATATAAAAAAAGGTACCCCTTTGAGCATATGTAGGAAGCAATAAACTTTTTTAAAGTTCTTAAATATGTCATGCAGCTATTGGTTATTTTTGGGTAAAATTCTCTTTCAGACACCATATATATATATATATATATATATATATATATCATAAATAGTTTATATAATTTGAAATTGTTCTACCTCAATCAGTTAAAGGTTTGGCTTTAAAAAATAACAAAGCATATTTAATTACTATATATTAAACTAATACAGACATCACATCATATCAAGATAGTAATTATTACTAAACTATCCCAATAAGGTAAAGTGTTACACAAAAGTATTGATTACCAAAATAAACAGCTAAATTGTTAATAAAAAATTATTAGTAATGAATTGGAGCCAAAAACAATAGATTCAATGTTCCTTTGAATCATGATGACATTATGTTTCTTTTTTAGACATTGTGTTGTTTTCATTCCTCCCATATATGAGATCAATTTGAATATTCTTCTCCTCTATAACATGGGAAATGTTTGTCTTAATTTCGAGCAACATATTTATTTTATCATTCAATATTATTACTTAACAATTTTTATTTATATTTTAAGATTTTATAATCATAATTTTCTAATTTTACATATTTTATGGATTAGTTAGTGGGTGGAAGCAGGGTTGATGACAGAGCACAGAGTGAAAGAGCGAAAAAGGAGAAAGGATAATTTGGACATTTAAAAAAAACAGAGACCAAAGCTTGAGAATTTGGAGAACAAAAGAAGCAGAGTGTCAGGGAGAACACGAACACATACACAAACATAAACAGAGTGTATCTCCGAACACTCTTTCTTCTTTGTTGTTGTTCTTCTTCTTCATGCAATTCCACTTCCTTAACATAATAAATCAAAGGCA


Gene Sequence:
>Vu_36524(-)
ATGTTCCTCTTTTTTCTTCTCTTCATTCTCATTCTCCACACTTCCTCCTCCTCCGCCACCATCCTTCTCCAAGGCAACGCCACTCTGCAAAGCCCCAACAACACTTTCCAACTGGGCTTCTTCAATTTCTTCCGAGGCCCGGGCCCGGGCCCGCCGAAATTCTACCTCGCCATCCGCCGCACCTCTTTGCCCAACCCCAACACCATTTGGGTCGCCAACCGCCTCCACCCCTCCCCCACCCAAGCCGCTTCATCCCTTGAACTCACCCCAACCGGTAAGTTACTCCTAACCCACTTCAACAACACTCTCTGGACCGCCGCCGGCGCCGCCACCGCCAACCTCACGCTCAAGCTTCACGATTCCGGAAACCTCGTCCTCCTCACTTCCGACGGCGTCGTTTCATGGCAGAGCTTCGATTCCCCCTCGGACACGTGGCTCCCCGGCATGAACCTCACGCGCTTCAACTCGCTCACCTCTTGGCGCACGGAGACGGACCCTTCCCCGGGGCTTTACACCCTGCGGTTGAAGCCATCCTTCTACGGCGAGTTCGAGCTCGTCTTCAACGAGACCGTGTCGTACTGGTCCACCGGGAACTGGAGCAATGGGACATTCCTCAACATCCCAGAGATGACCATCCCCTACCTCTACGCCTTTCACTTCGCCGCGCCGTTCTCCCCCGCCGCGGCCTTCGGTTTCTCCGAACGCGCCATCGAGACGAGCTTCCGACCGCCGACGATGTTCCGCCTGGAGCCCTTCGGACAGGTCAAGCAGTACTCGTGGAACAGCCAATCGGGGTCCTGGCAGATGTTTTGGTTCAAGCCGGAGAGTGTGTGCCAGGTTCGGGGACTCTGCGGGGGGTTCGGGGTTTGCACTGGGGACACATCCAAATTCTGTGAGTGTGTGAGTGGGTTTGAGCCTTTGGATGGTCATGGGTGGGGTTCTGGTGATTACTCTCAAGGTTGTCACCGTGTGGACGCGGGGTGTGACGGGGGTGATGGGTTTGAAGATCTTGGTGCTGTGAGGTTTGGATTCGGGAATGTGAGCCTGGTTAAGGGGAAATCTAGAAGCTTTTGCGAGCGCGAGTGCTTGGGTGATTGTGGGTGCGTTGGGTTGAGTTTCGAAAAGCAGAGTGGGTTATGCAAGAAATTTTACGGTTCGCTTTCGGATTTTCGGAATTTAACCGCCGATGGTGAGAGTGAGGTTTTGCATGTTAGGGTTCCGAGCGGGGGATCTGGGAGGAAGGTGTTTGATTGGAAGGTTTTGAGTGGGGTTATTATTGGGTCGGTTGCGGTTTTGGGGGTGGTGGTGGTGACATTGTTGGTGATGGTGAAGAGGAGGGTTGTGGGGAAGAAATTGGAAGAGGATGAGGAAGATGGGTTTGTGGGTGTGTTGAATTTGCGTGTGTTTTCTTACAAGGAACTTCAGTTGGCGACTCGGGGGTTTTCAGAGAAGATCGGGCACGGAGGGTTTGGGACGGTGTTTCAGGGGGAGTTGAGTGATGCTTCCGTTGTGGCTGTGAAGAGGTTGGAGAGGCCAGGGAGTGGGGAGAAGGAGTTCAGGGCGGAGGTCTCCACGATTGGGAATATTCAACACGTGAATCTCGTGCGGCTCAGAGGGTTTTGCTCTGAGAATTCTCACCGGCTTCTTGTTTATGAGTATATGCAGAACGGTGCTCTGAGTGTTTATTTGAGGAAGGAAGGGCCTAGTCTGAGTTGGGATGTTAGGTTCAGGGTGGCCGTTGGCACTGCTAAGGGGATTGCTTATTTACACGAGGAATGTAGATGTTGCATCATACATTGTGATATAAAGCCAGAGAACATTCTTTTGGACGGTGATTTCACTGCCAAGGTTTCTGATTTTGGGTTAGCAAAGCTGATTGGGAGGGACTTCAGTAGGGTGTTGGCGACTATGAGGGGAACGTGGGGGTATGTTGCACCGGAGTGGATTTCTGGTGTGGCAATTACAACCAAGGCAGATGTTTACAGCTACGGAATGACAATGCTGGAGCTGATCGGCGGTCGTAGGAACGTGGAGGCAGTGCCATCTGGCGGAGGAGAGAGTGGTACTGAAAGTGGAGGGAAGTGGTTCTTCCCACCATGGGCAGCGCAGCAGATAATAGAGGGAAATTTTGGTGAAGTGATTGATAAGAGACTTGGTAATGTGTATAACATTGAGGAGGCTAGAAGGGTTGGTTTGGTGGCAGTTTGGTGCATTCAAGATGATGAAGCAATGAGACCTACAATGGGTATGGTGGTGAAGATGTTGGAAGGGTTGGTGGAGGTAAGTGTTCCTCCACCTCCAAAGTTGCTTCAAGCTCTGGTTACTGGGGATTCATTTCATGGGGTGAAGGCTATTTCAGGCAATGGTTTGTCTACTGGTGGAAGCTTATCAGATGGCAACTTGGAAGTTTCAACTGCTGATTCTGAATCATATACAGGGAATGTTTTTTCTCCATTAGATGTCAATGTCAATGCCAATGTCAGTGTTCGATAA