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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_36427 LG11 23423452 23424101 PREDICTED: transcription factor MYB1R1-like
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Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/T 23423586 missense_variant p.Glu45Asp

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_36427.1
MSKDMNNQFESNEFPPSSSSSSSSSSYSYIASTPTQTNSYKKWSEEEHKLFLKGLEIYKRGQWTNISRYVVKTRTPAQVSSHAQHYYKHLAALKKGKRKRFYDAKTSDNKDAFLSHDQVHMQNDDVNVSDYQVDVQNDQVHMKNDAVYVPDYPVNVQNDDVYVPDYQVDQAIFADLDFLEELTDVV*


CDS Sequence:
>Vu_36427.1
ATGTCGAAAGATATGAACAACCAGTTTGAAAGCAATGAGTTTCCTCCATCATCATCATCATCATCATCTTCATCTTCATATTCATATATAGCATCAACTCCGACTCAAACTAATAGTTACAAGAAATGGAGTGAAGAAGAACACAAGTTGTTCCTTAAAGGACTCGAGATATACAAAAGGGGACAATGGACCAATATTTCAAGGTATGTGGTGAAAACCAGGACTCCAGCACAAGTTTCCAGCCATGCACAGCATTACTACAAACATTTGGCCGCACTCAAGAAAGGCAAAAGAAAAAGGTTTTACGACGCGAAAACATCAGACAACAAGGATGCCTTTCTTTCTCATGATCAAGTTCATATGCAAAATGACGATGTCAATGTTTCAGATTACCAAGTTGATGTGCAAAATGATCAAGTTCATATGAAAAATGACGCCGTCTATGTTCCAGATTACCCAGTTAATGTGCAAAATGACGATGTCTATGTTCCAGATTACCAAGTTGACCAAGCTATTTTTGCAGATCTCGACTTCTTAGAAGAATTGACAGATGTGGTCTGA


Promoter Sequence:
>Vu_36427::LG11:23421452-23423452(+)
TCCTGTATGTTACAACGTTCGTTCTGTAAGGGCTTGTAGTTTATTACATGTGTGAATACATGCTTAATTGAATTATAGTAGCTTACCCTTGTTTTCTGTTTTATCCATGTTACCGTTCGATTTTCTATTGCAATGATCATCCTTGTTAGATGTGAGCAGAAGGGGAAGAGCTTACGCTGGAGCAAGAGCTGGGTGGTGAGACTCCTGCTGAATAGTTTATGACCGTTCGGTCGTATAGTAATTATAGTTTTGGTGAACCGAATGTTCACTATTTTTGTTCTGTAAATATAACCGTTCGGTTATATGTTGAAAGTTCGGTAGTGGTATAGGAAGCTCTTGCAAAGATAAACGAAAAAATTTAATGGGTATTTTGTAATAATTGTAAGTTTGATGTTCGTATTATAGTAATTGTTCTATCATATTATTAAATGTGGATACCTGTATATAGTTGTGTGCTATATTTTTGGGATCTCACAAGTACACACTACAATTTCACATATTTTATAGAATTTTTCTTACAAATTTATTATAAAATTTTGTATATAAGATTTTTTTTCTAAGAATTTTAATTAACAAATAATTATTTTGTAAATAATTATTTCCTATAAAATTTACAATTATTTCTTACAAAATTTTCTGTAAAATTTTTACATTTTTTTGTGAGAAATATTTTGTGCAGAATATTTTGCAAAAGAAAATAATAATTTCTTGAAAATTTTTATTTATTCATAATAAAAGTTATAAATATTTTCTAAAATAAAGTTTTCAAAGAAAATTGATCTGAAATGTGTGTGTTTTTTTAGTGAAGTAAGTGTTTGTTTTACTATTGCAAGCATTCCAAAATTATAAGAAAGTCAAAATGTCAATATTGTAAGTTTTATAAGAATGCTTTTGAGATTTTCTTCTGTATAATGATTTTACGAGTTATTATTATTTAAGAATGTCATATTATTATTTATTGTAAATTTAAATTGTAATTTGCAGGTTTAAAAAAGTGATTACTTATTATAAAAGTATAAAATGCTTAATACAATGTCATTTTTAATTTGCAGATTTATCGCTTCCATTTTCATTTTATATTTAAACTTGTTTTTGTTAATTTTAATAAAAAAATGCTTAATACAATGGCATTTTTAATTTGCAGGATTTATCACTTTCCTTTTCATTTTATATTTAAACTTGTTCTTTTGTTAATAAATGCATTATTTAAAATTTACCCCTAACATTATAATAAATTTTGTTTTTATATATGTACTTTTAAATGTCAAAAATTATATAAATACATACATTTTCAATTTTTAGTGTGAACTATGTTTTATTTCATAATTATTATTTTATTATTATTAGTTATTTTATTAATTTTATTATTGTTAATAATATTTTCCATTATTGGTTATATATTATATTATACTTACTATTTTATATAAGATCTTAATTATTACTGGTTATTTTTTAATGTTTAATTACGATAAATGTAATGATCAAACTTAAAACATTGATTTAAACTCTACTTCTTCTTTTTTGGGGGATCGTAGGTAATACTAGTCTTATTTTTTATAAGATTGACTTTTATTTATTTAGATAATAATCAAATTTATAAACGACCTTAACCAATCAAGATTTATAGAATGATTATTTACAGCTATAAGATGAGAGAGATTTTAAGTGAAAACAAATTATTCTACAATATATATTCCAAGAATTATAATTTAGGCTTGTGTTTATTTTTATAATCAAATAGCATATCTTTATTTTACAGTTAGAAAGATAAATTATTCTCTTAAAAAGAATCTTAGGTGAAATCTACAGAACAGGTATACAGTTAAAATAGATTATTTAAGATATAGCTGTTGTTTATTGGGAGATTATATATCTATCTATAGATATAATATATCTACAAATTACTTTATCATTTATCTTTTAAGTTCAAGGTTCTTCCTATAAAACAAGGATTACAGTGAAAAGAATCACACAGGATCAGAGAAGAAAGAAGCAAAGAA


Gene Sequence:
>Vu_36427(+)
ATGTCGAAAGATATGAACAACCAGTTTGAAAGCAATGAGTTTCCTCCATCATCATCATCATCATCATCTTCATCTTCATATTCATATATAGCATCAACTCCGACTCAAACTAATAGTTACAAGAAATGGAGTGAAGAAGAACACAAGTAAGTACGTCGTTCTTATTTTATTTTTATTTTTTTTACTTCTGCTTAAATGCTTAATCAAGTCTTATTTACGATTTTGTTTCTAATAGGTTGTTCCTTAAAGGACTCGAGATATACAAAAGGGGACAATGGACCAATATTTCAAGGTATGTGGTGAAAACCAGGACTCCAGCACAAGTTTCCAGCCATGCACAGCATTACTACAAACATTTGGCCGCACTCAAGAAAGGCAAAAGAAAAAGGTTTTACGACGCGAAAACATCAGACAACAAGGATGCCTTTCTTTCTCATGATCAAGTTCATATGCAAAATGACGATGTCAATGTTTCAGATTACCAAGTTGATGTGCAAAATGATCAAGTTCATATGAAAAATGACGCCGTCTATGTTCCAGATTACCCAGTTAATGTGCAAAATGACGATGTCTATGTTCCAGATTACCAAGTTGACCAAGCTATTTTTGCAGATCTCGACTTCTTAGAAGAATTGACAGATGTGGTCTGA

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This project is funded by the Department of Biotechnology
Ministry of Science and Technology
Government of India

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