Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_36363 LG11 22416739 22419292 PREDICTED: putative receptor protein kinase ZmPK1
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/G 22416761 missense_variant p.Ser8Cys
A/G 22416851 missense_variant p.Glu38Gly
A/G 22416852 synonymous_variant p.Glu38Glu
C/T 22416957 synonymous_variant p.His73His
G/A 22417185 synonymous_variant p.Pro149Pro
T/A 22417241 downstream_gene_variant
A/T 22417271 downstream_gene_variant
A/G 22417301 downstream_gene_variant
G/A 22417342 downstream_gene_variant
A/T 22417372 stop_lost p.Ter165Leuext*?
A/G 22417822 missense_variant p.Asp315Gly
C/A 22417841 synonymous_variant p.Ala321Ala
G/T 22417844 missense_variant p.Lys322Asn
T/C 22417850 synonymous_variant p.Gly324Gly
T/C 22417934 synonymous_variant p.Phe352Phe
A/T 22417935 missense_variant p.Met353Leu
G/C 22417937 missense_variant p.Met353Ile
T/A 22418015 synonymous_variant p.Ala379Ala
C/A 22418066 synonymous_variant p.Thr396Thr
T/G 22418319 missense_variant p.Ser481Ala
G/A 22418491 missense_variant p.Arg538Gln
C/A 22418508 missense_variant p.Gln544Lys
T/G 22418614 splice_donor_variant&intron_variant
C/A 22418899 intron_variant
C/T 22418901 intron_variant
T/C 22419030 splice_region_variant&intron_variant
G/T 22419097 stop_gained p.Glu599*
A/G 22419122 missense_variant p.Asn607Ser
A/G 22419173 missense_variant p.His624Arg
G/A,T 22419199 missense_variant p.Gly633Ser

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_36363.1
MASSSSSSSSLIFMSILLLLLYLHSSAALPLSVERPDEDVIVSSPKGTFTAGFRNVGENAYCFGVWFSQAEKHVVWMANRDVPVNGKRSSLSLLKNGNLVLSDAGQFDVWDTKTLSEQPLELHLHDTGNLVLREQTNRSSVLWESFNFPTDTLLPGQLLTRFTKLVSARSEGNYSSGFYKLFFDNDNVFRLLYEGRQVSSVYWPDPWLVSNNVGFGNGRTSYNSSRVAVLDDLGLFSVSDKYSLTTIDYGLLLQRRLTLDYDGNVRIYSRENGQEDWSIAGQFKSQPCFIHGICGPNSICSHDKAIGRKCECLEGYSWVDSQDWSLGCTPKFKTTCDNKTEYRVVPLYEVDFYGYDYGTSFQNYTYKQCEKLCLEVCECLGFQYSFAVENGNFWCYPKTQLLNGHHSPGFPGQFFVRLPKESAQENHLQNNDGLVCPRNAEMLLERPYVKGKENGSVKFMLWFAVGLGGFEAVCIFMVWCFLFRSSDHLVRADQQGYVLAAATGFRRYTYSELKQATKGFSEEIGRGAGGTVYKAVLSDNRVAAIKKLHEFADQGESEFLTEMSIIGRLNHMNLIGMWVQVTEPGQESHNERLATWVREKRRKTPEGTSWVEQIVDPTLGSDYNMKQLEILATVALECVEEEKDVRPSMSQVVERLQNHEHGS*


CDS Sequence:
>Vu_36363.1
ATGGCTTCTTCTTCATCTTCTTCTTCTTCACTAATCTTCATGTCCATCCTCCTCCTCCTCTTGTACCTCCACTCTTCGGCGGCGCTCCCCCTCTCCGTGGAGAGACCCGACGAAGACGTGATAGTTTCGTCGCCGAAGGGGACGTTCACGGCGGGGTTCAGGAACGTGGGGGAGAACGCGTACTGCTTCGGCGTGTGGTTCTCGCAGGCGGAGAAGCACGTGGTTTGGATGGCCAACCGCGACGTTCCGGTGAACGGGAAACGCTCCTCGCTCTCCCTGCTCAAGAACGGCAACCTCGTGTTGTCTGACGCCGGACAGTTCGACGTTTGGGACACCAAGACTCTGTCGGAGCAGCCGTTGGAGTTGCATTTGCACGACACCGGGAACCTCGTGCTCCGGGAACAGACCAATAGAAGCTCTGTTTTGTGGGAAAGCTTTAATTTTCCGACTGATACACTCCTCCCTGGCCAGCTTCTCACCAGGTTCACGAAGCTAGTCTCTGCGAGAAGTGAGGGCAACTATTCCTCTGGGTTTTACAAGCTCTTCTTCGACAACGACAACGTTTTCCGTCTTTTGTACGAGGGTCGTCAAGTTTCAAGCGTTTATTGGCCGGATCCTTGGCTGGTTAGCAACAACGTTGGGTTTGGTAACGGAAGAACCTCGTACAATAGTAGCAGAGTTGCAGTTCTAGATGATTTGGGTCTATTCAGTGTTTCTGATAAATATAGTTTAACGACAATTGATTATGGGTTACTCCTTCAACGAAGGTTGACCCTTGACTATGATGGCAATGTTCGTATCTATAGCAGAGAAAACGGTCAAGAAGATTGGTCAATAGCAGGGCAATTTAAATCACAACCTTGTTTCATTCATGGGATCTGTGGACCTAACAGTATATGCAGTCATGATAAAGCAATTGGTAGAAAGTGTGAGTGTCTTGAAGGATATAGCTGGGTTGATAGCCAAGATTGGTCTTTGGGTTGCACACCAAAATTCAAAACTACCTGTGATAACAAGACAGAATATCGCGTAGTGCCTCTCTATGAAGTGGACTTTTATGGATATGACTATGGAACTTCCTTTCAAAATTACACATATAAACAATGTGAGAAACTGTGCTTGGAGGTGTGCGAGTGCTTGGGCTTTCAGTACAGCTTTGCTGTAGAGAATGGGAACTTTTGGTGTTACCCAAAGACGCAGTTGCTAAATGGACACCATTCACCCGGTTTCCCAGGGCAATTTTTCGTGCGTCTGCCAAAAGAAAGTGCTCAAGAGAACCACCTGCAAAACAATGATGGCTTGGTTTGTCCGAGAAATGCAGAAATGCTACTAGAAAGACCATATGTGAAAGGCAAGGAAAATGGGTCTGTGAAGTTCATGCTTTGGTTTGCAGTTGGCTTAGGAGGGTTTGAGGCGGTGTGCATCTTTATGGTGTGGTGTTTCTTGTTTAGGAGTAGCGACCATTTGGTCAGGGCAGACCAACAAGGGTATGTTCTTGCTGCAGCTACAGGGTTCAGAAGGTACACATACTCTGAACTGAAACAAGCCACAAAGGGTTTCAGTGAAGAGATCGGAAGGGGTGCAGGAGGGACAGTGTACAAGGCTGTGTTATCGGATAACCGAGTTGCAGCAATAAAAAAGCTGCACGAATTTGCGGACCAAGGAGAGAGTGAGTTCCTCACTGAAATGAGCATCATTGGAAGGCTCAATCACATGAACTTGATCGGCATGTGGGTCCAAGTGACAGAACCAGGGCAAGAGTCGCATAATGAGAGGTTGGCAACATGGGTGAGGGAGAAAAGAAGGAAAACACCAGAAGGAACATCTTGGGTGGAACAAATTGTTGACCCCACTTTAGGATCAGATTACAACATGAAGCAGTTAGAGATTTTGGCAACGGTGGCTTTGGAATGTGTAGAGGAAGAGAAAGATGTGAGACCTAGCATGAGTCAAGTCGTTGAAAGACTCCAAAATCATGAACACGGTTCTTGA


Promoter Sequence:
>Vu_36363::LG11:22414739-22416739(+)
ACTAATAAGTATCGACTAATGTGTCAAATTAAACTAATGAAATAATTTTCAAGAAGAAAGCAATAAGCAAAGGAGTAGAATCTCTGTATGATAAGTCACATAGAGATAAAATATGTCACATAAAATATGAAGATAAAAATCAAAATTGATTAGTAAGAGAATAAAGATAACTAATCATTCTCTTTAATACATATACAAATTATAACATGAAATAATTTAATTTAATTTTTATTCTCAAACATAATTTTACAATTAATTTAATAAAGGTATATTAATACTAAAAAAAAATTTGGAGACCATTTTAAAGCAAAGACTTTACCTACTTAAACCTTAAGCTAGTCTAATGGTCTTTTAGGTCAAGGAGAGTGTTAGTATATTCACTAAAAAAAGTCATAGACAATCAGCAAAAAGTTGTTAATTTAATTATAGAGTCAACAGAAAACTAAAAAAAAGCAATAATGAACTATTTCCTTTCTCTTGATTTTTTTTATGAAACTTCAAAAACTAAAAAGACAATCCCAAAATGTCTAAGTTAAACAAGAAAGAGCATAACTTCATTGAACATGAGTAAAATGAATAAAATTCTTAGTATAATACTTTATTGAACACAAGATTCTTAAGAATAGGAAAACTTTTAAAAATAGAGTAATTTACCTCATAAATTAAAACAATGGAGTAGTTAACTTAAAAATTTACACATTAAAGGTAAGTATTTATGAGTTCTAACGATTTCTTCATAAAATTTTGAAAATGTGAAGTCATCATGACTCATGATAATTTTTTTGTAAATATGTTGAACGAAAGCTATAATGTATATAGTTGAGTGAGGAACGAGCGAGTGAAGAGCTAGACAAGATTGTCGAGTAGCAAAGAGAACTCGACAAGTTTGCCAAGTAGCAAAGAGAACTCAACAAATTTGCCAGTAGCAAGAAGAGGTCAGCTAAACGATTGAGCAGTTTGGAGATGTTGGTAAGATATGATAATATTGCTGAGTAGTGCGATGAACATGGCAAAACAGTTGAATAAAGTAATAGGTTGACCAAACAAGTGGATAGCCTAGGAAGGAACCTAGACAACTTGCATAGCTTGGATGAGCATGTAGAGAGCTTAGTAAAGAGTTCGACGCAGAGCTTGATGAGAGCTCAATGGAGAACTCTTCGAGTTCAACAATAAAAAAAACTTGATATATTCAGTTTTACAATAAAAATCGTAATGAGTTAGGACAACTTTGATTTGATTTGATTTGATTTAATTTTTCACTGTTACTAACAATTTTTGTTGATGTTTAAAAGTAAATCATATAAGTCATAAAGACCTCAACTTTTTCAAATTTTGTAAAGAAATTATTTTCACATGACTTCAATTTAAAGGTGGTCAAGATTTCATAAGATTTATTCTTAGAAATTTTAAGTCAATTATCCCATATGATTTTACGGGTCACAAGGGTATGTTTAAACAAAGACTTCCTTGGTTGTCTTTATTTATCTTTTTGAAATTGAAGCATGAAAGAGTGAGTTGATCCATGAGGTGCATTTCCAGATGCAAAAGAGTACGTAACGTTTGACTTCGTGATTATACAAACTTTCTTATTTCAAATGGCGTGGTGGATCGAATAAAATACTACAGTCTATGCAGTACTGCTTTACTTTACATTCTTTATCTTTTCCTATAATCGGAAAGTCTGCATTCTTCAAATCTCACACGCTGTCGTACACGGCATCCATTTCCTTTTTTCATTCCAAAGTTATCTGTTTTACCGATCAAACAATAAAATATCATTTTTTTAGATTTGTGTAAACAAGAAATATGAATGTAAGCGAGAAAAAAGAAGAACGAAAGAACCAACGAAGGTCGTAATCACCCACATGTGTCTTGTCTACATGCAAGGTACGAACTTTCTTTTTCTTTTCCCACACCCAGTTGCTATTTTCACTGTATAATATAACATGGCTACTACAAATTCATCGACTCACTTTCCAAAATCTTCAACAACGTTTTCA


Gene Sequence:
>Vu_36363(+)
ATGGCTTCTTCTTCATCTTCTTCTTCTTCACTAATCTTCATGTCCATCCTCCTCCTCCTCTTGTACCTCCACTCTTCGGCGGCGCTCCCCCTCTCCGTGGAGAGACCCGACGAAGACGTGATAGTTTCGTCGCCGAAGGGGACGTTCACGGCGGGGTTCAGGAACGTGGGGGAGAACGCGTACTGCTTCGGCGTGTGGTTCTCGCAGGCGGAGAAGCACGTGGTTTGGATGGCCAACCGCGACGTTCCGGTGAACGGGAAACGCTCCTCGCTCTCCCTGCTCAAGAACGGCAACCTCGTGTTGTCTGACGCCGGACAGTTCGACGTTTGGGACACCAAGACTCTGTCGGAGCAGCCGTTGGAGTTGCATTTGCACGACACCGGGAACCTCGTGCTCCGGGAACAGACCAATAGAAGCTCTGTTTTGTGGGAAAGCTTTAATTTTCCGACTGATACACTCCTCCCTGGCCAGCTTCTCACCAGGTATATATCACCAATTTTTTTCACACTTTCTCTTTCATTTTACTGAAATTACACGTTGAACTTTTGGATTACACGCTAAAATGCTTTTATGTAATTCAAAATCGATTTGATTCACACTGATGATATAACTTGATGGCAGGTTCACGAAGCTAGTCTCTGCGAGAAGTGAGGGCAACTATTCCTCTGGGTTTTACAAGCTCTTCTTCGACAACGACAACGTTTTCCGTCTTTTGTACGAGGGTCGTCAAGTTTCAAGCGTTTATTGGCCGGATCCTTGGCTGGTTAGCAACAACGTTGGGTTTGGTAACGGAAGAACCTCGTACAATAGTAGCAGAGTTGCAGTTCTAGATGATTTGGGTCTATTCAGTGTTTCTGATAAATATAGTTTAACGACAATTGATTATGGGTTACTCCTTCAACGAAGGTTGACCCTTGACTATGATGGCAATGTTCGTATCTATAGCAGAGAAAACGGTCAAGAAGATTGGTCAATAGCAGGGCAATTTAAATCACAACCTTGTTTCATTCATGGGATCTGTGGACCTAACAGTATATGCAGTCATGATAAAGCAATTGGTAGAAAGTGTGAGTGTCTTGAAGGATATAGCTGGGTTGATAGCCAAGATTGGTCTTTGGGTTGCACACCAAAATTCAAAACTACCTGTGATAACAAGACAGAATATCGCGTAGTGCCTCTCTATGAAGTGGACTTTTATGGATATGACTATGGAACTTCCTTTCAAAATTACACATATAAACAATGTGAGAAACTGTGCTTGGAGGTGTGCGAGTGCTTGGGCTTTCAGTACAGCTTTGCTGTAGAGAATGGGAACTTTTGGTGTTACCCAAAGACGCAGTTGCTAAATGGACACCATTCACCCGGTTTCCCAGGGCAATTTTTCGTGCGTCTGCCAAAAGAAAGTGCTCAAGAGAACCACCTGCAAAACAATGATGGCTTGGTTTGTCCGAGAAATGCAGAAATGCTACTAGAAAGACCATATGTGAAAGGCAAGGAAAATGGGTCTGTGAAGTTCATGCTTTGGTTTGCAGTTGGCTTAGGAGGGTTTGAGGCGGTGTGCATCTTTATGGTGTGGTGTTTCTTGTTTAGGAGTAGCGACCATTTGGTCAGGGCAGACCAACAAGGGTATGTTCTTGCTGCAGCTACAGGGTTCAGAAGGTACACATACTCTGAACTGAAACAAGCCACAAAGGGTTTCAGTGAAGAGATCGGAAGGGGTGCAGGAGGGACAGTGTACAAGGCTGTGTTATCGGATAACCGAGTTGCAGCAATAAAAAAGCTGCACGAATTTGCGGACCAAGGAGAGAGTGAGTTCCTCACTGAAATGAGCATCATTGGAAGGCTCAATCACATGAACTTGATCGGCATGTGGGGTTATTGTGTGGAAGGAAAACACAGGATCCTGGTTTATGAGTACATGGAAAACGGCTCTTTGGCTAATAATCTTCCATCAAATTCACTTGATTGGAGGAAGAGGTACAACATTGCAATGGGAATGGCAAAGGGTTTGGCCTATTTACATGAAGAGTGCTTGGAGTGGATCTTGCACTGTGATATCAAGCCTCAAAACATACTTCTTGACTCTGATTACCAACCCAAGGTGGCTGATTTTGGCTTGTCCAAGCCATTGAATAGAAACAACCTCAACAACTCAAGCTTCTCTAGAATAAGAGGCACAAGGGGTTACATGGCACCAGAATGGGTTTTCAACTTGCAAATCACTTCCAAGGTTGATGTTTATAGCTATGGAATTGTTGTGTTGGAGATGATAACTGGGAGGAGTCCAATGATTGGAGTCCAAGTGACAGAACCAGGGCAAGAGTCGCATAATGAGAGGTTGGCAACATGGGTGAGGGAGAAAAGAAGGAAAACACCAGAAGGAACATCTTGGGTGGAACAAATTGTTGACCCCACTTTAGGATCAGATTACAACATGAAGCAGTTAGAGATTTTGGCAACGGTGGCTTTGGAATGTGTAGAGGAAGAGAAAGATGTGAGACCTAGCATGAGTCAAGTCGTTGAAAGACTCCAAAATCATGAACACGGTTCTTGA