Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_36269 LG11 20273778 20275232 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/T 20273898 splice_acceptor_variant&intron_variant
T/C 20273937 intron_variant
G/A 20273953 intron_variant
C/T 20273960 intron_variant
C/T 20273963 intron_variant
G/A 20273967 intron_variant
A/G 20273988 intron_variant
G/A 20273998 stop_gained&splice_region_variant p.Trp26*
A/G 20274007 missense_variant p.Asn29Ser
G/A 20274011 synonymous_variant p.Val30Val
A/G 20274042 missense_variant p.Arg41Gly
C/A 20274116 synonymous_variant p.Ser65Ser
G/A 20274148 missense_variant p.Arg76Lys
G/A 20274154 stop_retained_variant p.Ter78Ter
C/T 20274158 synonymous_variant p.Cys79Cys
C/T 20274170 synonymous_variant p.Gly83Gly
G/A 20274171 missense_variant p.Gly84Arg
T/G 20274209 synonymous_variant p.Gly96Gly
G/A 20274241 missense_variant p.Ser107Asn
A/C 20274248 missense_variant p.Arg109Ser
G/A 20274252 missense_variant p.Val111Ile
T/C 20274257 synonymous_variant p.Val112Val
G/T 20274265 missense_variant p.Arg115Leu
A/G 20274266 synonymous_variant p.Arg115Arg
G/A 20274273 missense_variant p.Glu118Lys
G/T 20274275 missense_variant p.Glu118Asp
G/A 20274278 synonymous_variant p.Gln119Gln
G/A 20274294 missense_variant p.Asp125Asn
C/T 20274310 missense_variant p.Ala130Val
G/A 20274321 missense_variant p.Asp134Asn
G/T 20274324 missense_variant p.Gly135Cys
C/T 20274326 synonymous_variant p.Gly135Gly
G/T 20274330 stop_gained p.Gly137*
A/C 20274354 intron_variant
A/G 20274357 intron_variant
A/G 20274359 intron_variant
C/T 20274376 intron_variant
G/A 20274389 intron_variant
T/C 20274430 intron_variant
T/G,A 20274431 intron_variant
A/G 20274455 intron_variant
C/T 20274471 intron_variant
T/G,* 20274484 intron_variant
T/G 20274486 intron_variant
G/A 20274500 intron_variant
G/T 20274506 intron_variant
T/C 20274523 intron_variant
G/A 20274555 intron_variant
G/A 20274587 intron_variant
C/T 20274594 intron_variant
T/C 20274616 intron_variant
C/G 20274655 intron_variant
A/G 20274658 intron_variant
G/A 20274705 intron_variant
A/C 20274711 intron_variant
A/G 20274715 intron_variant
A/G 20274754 intron_variant
C/A 20274760 intron_variant
C/T 20274776 intron_variant
G/A 20274789 intron_variant
T/C 20274799 intron_variant
T/C 20274811 intron_variant
C/T 20274818 intron_variant
T/C 20274838 intron_variant
G/A 20274840 intron_variant
C/T 20274843 intron_variant
T/C 20274845 intron_variant
C/G 20274847 intron_variant
G/A 20274848 intron_variant
G/A 20274852 intron_variant
T/C 20274869 intron_variant
T/C 20274900 intron_variant
C/T 20274902 intron_variant
G/A 20274915 intron_variant
G/A 20274918 intron_variant
C/T 20274929 intron_variant
G/A 20274931 intron_variant
T/C,* 20274960 intron_variant
T/C,* 20274963 intron_variant
T/C 20274978 intron_variant
C/T 20274988 intron_variant
A/C,* 20274991 intron_variant
A/G,* 20274992 intron_variant
T/C,* 20274994 intron_variant
A/G,* 20274995 intron_variant
A/G,* 20274998 intron_variant
C/T,* 20275005 intron_variant
T/C,* 20275006 intron_variant
C/T 20275009 intron_variant
G/A 20275010 intron_variant
T/C 20275011 intron_variant
G/A 20275013 intron_variant
C/T 20275021 intron_variant
C/T 20275024 intron_variant
G/A 20275028 intron_variant
C/T 20275029 intron_variant
C/T 20275036 intron_variant
T/C 20275039 intron_variant
G/A 20275043 intron_variant
G/A 20275046 intron_variant
A/C 20275051 intron_variant
G/A 20275052 intron_variant
C/T 20275085 stop_gained p.Gln148*
C/A 20275090 synonymous_variant p.Ile149Ile
C/T 20275093 synonymous_variant p.Cys150Cys
C/A 20275106 missense_variant p.His155Asn
C/G 20275109 missense_variant p.Arg156Gly
C/T,G 20275122 missense_variant p.Pro160Arg
C/T 20275128 missense_variant p.Pro162Leu
C/T 20275133 missense_variant p.Arg164Cys
G/A 20275139 missense_variant p.Ala166Thr
G/T 20275142 missense_variant p.Ala167Ser
G/A 20275148 missense_variant p.Asp169Asn
T/C 20275163 missense_variant p.Tyr174His
A/G 20275164 missense_variant p.Tyr174Cys
G/A 20275170 missense_variant p.Arg176His
C/T 20275171 synonymous_variant p.Arg176Arg
T/C,* 20275174 synonymous_variant p.Arg177Arg
G/A 20275176 missense_variant p.Arg178His
G/A 20275179 missense_variant p.Gly179Asp
C/T 20275196 missense_variant p.Pro185Ser
C/T 20275204 synonymous_variant p.Arg187Arg
A/G 20275216 synonymous_variant p.Leu191Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_36269.1
MVRSSFSYATFIVLTFKGQGCIENIYGKTTWEHERRDLVTSETFGVIGPMMVLAILRAFKYIPSSPCLSIEEINHAGDDAAFLADLRMVSPSVVVLVDSEGWADMATAADSSFRRDVVSSLEYYSMILELLDVSTAGEEGKKGQAQMAKSARVSSTAPDRQAQIAKPLQIDEPSIVAVAALVVKLLTASHRYPLTP*


CDS Sequence:
>Vu_36269.1
ATGGTTAGATCAAGTTTCAGCTATGCCACGTTCATCGTTCTCACCTTCAAGGGTCAAGGTTGTATTGAGAATATATATGGAAAGACAACGTGGGAGCATGAGAGGAGAGACCTGGTCACTTCAGAGACGTTTGGAGTTATTGGACCGATGATGGTTTTGGCTATTTTGAGGGCCTTCAAGTACATTCCTTCTTCTCCATGTCTAAGTATCGAGGAAATAAACCATGCAGGAGATGATGCCGCGTTCTTGGCGGACTTGCGGATGGTCTCTCCAAGCGTGGTGGTTTTGGTGGATAGCGAGGGGTGGGCTGATATGGCTACAGCAGCAGACTCGTCGTTCCGACGCGACGTCGTGAGCAGTTTGGAGTACTACTCGATGATTTTGGAGTTGCTGGATGTGTCGACGGCTGGGGAGGAGGGGAAAAAGGGCCAAGCCCAAATGGCCAAATCTGCTAGGGTTTCATCCACCGCTCCAGATCGCCAAGCCCAAATCGCCAAGCCGCTCCAGATCGACGAGCCCTCTATCGTCGCCGTCGCGGCGCTTGTCGTCAAACTCCTCACCGCGAGTCACCGCTACCCTCTCACCCCTTAA


Promoter Sequence:
>Vu_36269::LG11:20271778-20273778(+)
AAAATTAAATACAAATTCAAAGACAATTAATAAAAAAAAACAACTAACAAATAATCATTATTGGAACCTACACATACGGATGTGGGGTTGGTAGTTGAAATCCTATACTTAAATATATCGTTAACTTTTATCTTGTCAACATCTAATAATAAACAAGAAACTTATTGCTATATATTATAAAAATTAACAAGAAACTTGGCTTCTTTGTGTACCAAATTGGTGAAATAATTTGGTCAACCCACGGGAAAAGGCAAGAATTCAAAATCATGACTTTCTTCGTTTCCACTAGGAAGAAATATTAACTGAAGAATTAATAAATATATTTTTTTATTAAATTTGGTAAAAGATGTATTAAAAATTCACCAAGTATTTTAGTAAAACATCTTTATAGAATTTGTTTATTAATTTTTAGTTTATATATTTAATGCATTTGTTTTTTAACTGCCTTTAAGGATTAAATAACACTAATTTTTAAGCTTTAATAATAAGACTGTGTTTTTAATTAATCAGAAAATATATTAAGGCTGAATTTGATCATGATATTTTTTTTTATAAATATCAATAAACTTATCAAAGGTGATATTTTATTAAATAAAAATGGGAAACTCTTTATACTACAGATGTATATATAGAGTAATTTCTTTTATGATTAAAAGCCACGTTAAAATATTAAAAAATGTATTTATATATTAATATTTTGAAAAAAAATGCATTAAAATTACAAAGAATAATACTTTGAATTTTTCATTTTCTTAACCAATATTAATATATATTAATATTAATATTTCTTACATGGTGCTAATATGAATAGTGTATCAGAGTATTATCTGGTTGAATACAGTCACACTTAAAAAGTGAAGATCTCTATATATAGTTGAGTTGTGTGAAATTAGAGTATTATTATATATTATAAAAATAAATAATAATAAGAAGGTGGTAGAGGGAGTATGGAAAATAGAGAATAATAGCATAATAAATGAGAGAGATGATAAAGTTTGACTAAGTGCATGGTGTACAGTGGTGTTGGTTGAATGGTTAAGCATGGCGTGTGGGCGTGAATGAAGGAAGCAAAACCATGAGAGACTGAGACTGAAACTGAGAATGGTGTGAGAGAGAGAACAGAAGAAAGAGCACGAGTGGCCAAAGGGACCCAATCATATGCCTCCTGTGTTGTCATTTTCCTCATTTTCTTATTCCATTCTGCACCTTCTCAACATAAAACACAGACACAGACAACTTCTCCCTCAGACGCTGTCTCTGTCATCAACATCTTCTGTCCCTCCAACCATTCCACGTACATTTCAAATAATATACTATTCTACTCTCCATTTTAAATATCAGAAACTTTCTTCAGTTTTGTAAAACACTTCGATCGGTGGTGTTCACTGTGCACCATTTTGTGATAAATATGTTTCTCAAACATATTTGGGGTGATTAAGGGGAGCATTCATTATTTGCACAGAAAATTTAAGAGTGAAAAATTACTAAGATATTCACTTGTCCTTTATTTAGACAAAGTCTGTTATAACACACTTAAAATGTCATAAAGTACGTTGTATTATTATCTCTATTTTTGTCCTTGATTTCGGAAAGAGTTTATTCATGAGGTTGCGAAGATGTTAGCAGGTACCAACAGATGAATAAAAAAAATATTTATACTGATTTTTTTATAAAATAAAATTATGAATTTGAGAGTACTTCGGATATTCCATTAGTTAAATAAATTAGGGTTAAATATGTTTTTAGTCCCTATATTATCAAGCGGTTTTGGTTTTAGTCCCTCTTCCAAAGTAAGGTACATTTTAGTCCTCTTTCTTAAGGAAACTTTGATTTTAGTCCTACAAAACTAACACTGTTAAAAACTAGCTGATGTGGCTAACGGTAGACTGACACAATTTTTTTCCCCTTATACTGAGTCAGTGTTTCTCCATGTCTAAGCATCGAGGAAATAAACCATGCAGGAGATGCATACTTACCTTGAACACAAGAAAGGAGTTTTA


Gene Sequence:
>Vu_36269(+)
ATGGTTAGATCAAGTTTCAGCTATGCCACGTTCATCGTTCTCACCTTCAAGGTAAGTATGCATCACGCTCACGAATGCATTACTTTTGTTGTGAGTTTTTGTTAACATTGTGTTCCCACAGGGTCAAGGTTGTATTGAGAATATATGTAATAATAGTATTGGTGGGTTGCATTAGGTGGATGCTACGTTGAAGGAGGTTATATGAGAAACACAATCAGATGGAAAGACAACGTGGGAGCATGAGAGGAGAGACCTGGTCACTTCAGAGACGTTTGGAGTTATTGGACCGATGATGGTTTTGGCTATTTTGAGGGCCTTCAAGTACATTCCTTCTTCTCCATGTCTAAGTATCGAGGAAATAAACCATGCAGGAGATGATGCCGCGTTCTTGGCGGACTTGCGGATGGTCTCTCCAAGCGTGGTGGTTTTGGTGGATAGCGAGGGGTGGGCTGATATGGCTACAGCAGCAGACTCGTCGTTCCGACGCGACGTCGTGAGCAGTTTGGAGTACTACTCGATGATTTTGGAGTTGCTGGATGTGTCGACGGCTGGGGAGGAGGGGAGTGGGTGAGGAGAATCAGAATGATGCATCTGCGACCGAAGGTTGGGTGGAAGATGGAAGGAACACTAGTAAAAAATGTGGTTTTTAACTTTCTATATAGGCTTCGGTTATGTGAAAACTGAAGCGTATAACGTTATATACATCTGTTAATCTAAGACCCGAGGCAGAATAGTGATATTGCACTGTTTAATCTAAGACCTGAGGCCTATACCACTGCTACACCTGCTACGTGCTTGCAACTTTACCTGCTACGCCAGACTTAAGGCATCGGTTCATTAGGAACCGAAATCGTTGATGCTGTCCAGCACTTTATACCTCAGGCTGGCCTTTTAACCGGTGCCAAAGCAAAAGCTTTTACTGCCACTGTCACTATGCACTTAACCTATTTGCGTCAAAAAGCTTCTCCTTCCTCCTACTCTCCATTCTTCCTTTGCGTCGCTCTTTCTTCTGTGGGTTCCTTCACCACTGCCATGGCTCGCCGCGCCACCCTTGTGCTTCTAGTGCTTGCGCCTGCCACTACTCGTTGTTGTTCTTGGTCGCGCCTTCTCCCTTCGTCGTCGTGCCATTGGTGCCCCGCCGCTGCTGCCTACGGTGCTTCCTCCAACGAATCCACTCTTTTGTCGTCGTTGTAGCCTCCGTCGCTGCTGCCTCAACTACTACTGCCTCTGCCGTTGCTGCCTCCGCCACTGCTGCCTCCGCTACTGCTGCCTCAGCCGGAAATAGAAAAGGGCCAAGCCCAAATGGCCAAATCTGCTAGGGTTTCATCCACCGCTCCAGATCGCCAAGCCCAAATCGCCAAGCCGCTCCAGATCGACGAGCCCTCTATCGTCGCCGTCGCGGCGCTTGTCGTCAAACTCCTCACCGCGAGTCACCGCTACCCTCTCACCCCTTAA