Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_36028 LG11 10536503 10540790 disease resistance protein RPM1
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/T 10536589 intron_variant
A/T 10536690 intron_variant
G/A 10536705 intron_variant
A/G 10536760 intron_variant
T/A 10536767 intron_variant
G/A 10536769 intron_variant
T/A 10536770 intron_variant
C/T 10536906 intron_variant
T/C 10536907 intron_variant
A/C 10536979 intron_variant
A/T 10536988 intron_variant
G/A 10537080 intron_variant
C/A 10537083 intron_variant
T/C 10537086 intron_variant
A/T 10537110 intron_variant
T/G 10537147 intron_variant
T/A 10537154 intron_variant
C/T 10537186 intron_variant
A/C 10537189 intron_variant
C/G 10537193 intron_variant
A/T,C 10537194 intron_variant
T/C 10537196 intron_variant
T/C 10537201 intron_variant
G/A 10537207 intron_variant
A/G 10537213 intron_variant
C/A 10537229 intron_variant
C/G 10537231 intron_variant
C/A 10537238 intron_variant
T/A 10537255 missense_variant&splice_region_variant p.Lys917Met
G/C 10537274 missense_variant p.Pro911Ala
T/G 10537422 stop_lost p.Ter861Tyrext*?
G/T 10537496 missense_variant p.Leu837Ile
C/T 10537502 missense_variant p.Ala835Thr
A/C 10537540 missense_variant p.Leu822Arg
T/C 10537557 missense_variant p.Ile816Met
T/C 10537591 missense_variant p.Gln805Arg
C/T 10538017 missense_variant p.Gly663Asp
G/A 10538042 missense_variant p.Pro655Ser
C/T 10538082 stop_gained p.Trp641*
C/A 10538365 missense_variant p.Arg547Leu
A/T 10538457 synonymous_variant p.Ala516Ala
C/G 10538639 missense_variant p.Gly456Arg
G/A 10538669 missense_variant p.Pro446Ser
C/A 10538852 missense_variant p.Gly385Trp
A/T 10538853 missense_variant p.Asn384Lys
C/T 10538857 missense_variant p.Arg383Lys
G/T 10539052 intron_variant
G/A 10539095 intron_variant
G/A 10539132 intron_variant
A/T 10539178 intron_variant
T/A 10539701 missense_variant p.Glu333Val
G/T 10539816 missense_variant p.Leu295Ile
T/A 10539821 missense_variant p.His293Leu
T/C 10539836 missense_variant p.Tyr288Cys
C/A 10540152 missense_variant p.Gln213His
G/A 10540173 synonymous_variant p.Asn206Asn
T/A 10540291 missense_variant p.Lys167Met
A/G 10540410 synonymous_variant p.Ile127Ile
A/G 10540455 synonymous_variant p.Val112Val
A/G 10540490 missense_variant p.Ser101Pro

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_36028.1
MALAAVGGALLSAFFDVLFDRLASPEVLNFIRGKKPDKLLRKVKTQLIVVRVVLADAEERQITDSNVKEWLALLRDVVYEVDDLLDEVSTKAATQKEVSNSFSRLFKTKKIVSISKLEDIVERLDDILKQKESLDLKEIPVESYRPWKAQPTSLEDGYAMYGRDNDKEAIMKMVSVDSINGERVSMISIVGMGGVGKTTLARSVFNDVKLNQQIFDLKAWVCVSDIFDIVKVTRSMIEEITRKPCKLSERGSKVLITTRNENVAAAVPYHTVEVYHLNKLSNEDCWLVFANHAFPLSEASETRGTLEKIGKEIVKKCNGLPLAAQSLGGMLRRKQTIRDWNNVLQSDIWELPEKLTKLPSAMQNLVNLRHLEIGDSSIKEMPKGMGKLNQLQNLEFYIVGKHKENSIKELGGLPNLGGSFSIKALENVTNGEEALEARIMDKNHISHLSLEWSIAKDNSIDFQIELDVLSNLEPHQDLKSLSIKGYKGTRFPEWVGNFSYRYMTRIDLYNCNNCCMLPLLGQLPSLSELIISNMNSVKTIDAGFYKNDDCSSVTPFPSLEDLCIYNMPCWEVWNDFDSEAFPLLKNLYIEECPKLKGDLPNHLPALQTLTIRNCELLVYSVPGPLTLRTLEIRKSDKVTFHGFPLLVEGIDLEGGPVVESMMEAIAIIQPTCLKSLFLQNCSSAISFPSDLLAASLKSLNISGLTKMKFPMQHKHKLLKSLSINNSCDSLTSLPLAIFPNLTSLKITNCENMESLLVSGSELSMSLNSFEIGHCPNFVSFPGERLCMPNLTSFRVYNCEKLKSLPNHMETLVPKMEYLYVSNCQQIESFPGGGMPPNLRTVEISNCEKLLRGQGWKSMDMVKSLDVWGPCDGIKSFPKESLLPPSLVSLHLFDLSSLETLDCKGLQHLTSLQELNIERTESHLITTGLHSLQCTE*


CDS Sequence:
>Vu_36028.1
ATGGCATTAGCTGCGGTAGGTGGTGCGCTCCTTTCTGCTTTCTTTGACGTTCTTTTCGACCGGCTGGCCTCCCCTGAGGTTCTCAACTTTATCCGAGGAAAGAAGCCTGACAAGTTGCTTCGAAAGGTGAAAACCCAGCTGATAGTTGTTAGAGTTGTGCTTGCTGATGCTGAGGAGAGACAAATCACAGACTCCAATGTCAAAGAGTGGCTCGCTCTTCTCAGAGATGTTGTCTATGAGGTTGATGACTTACTCGATGAAGTTTCTACTAAAGCTGCTACTCAAAAGGAGGTAAGCAATTCATTTTCTCGCCTTTTCAAAACGAAGAAGATTGTTAGTATTAGTAAGTTGGAAGACATAGTTGAAAGATTAGATGACATTTTAAAACAAAAAGAGAGTCTTGATTTGAAGGAGATTCCAGTGGAGAGCTACCGGCCATGGAAAGCTCAGCCAACATCTTTGGAAGATGGATATGCTATGTACGGTAGAGATAATGATAAGGAGGCCATAATGAAGATGGTGTCAGTGGATAGCATCAATGGTGAAAGAGTGTCTATGATCTCTATTGTAGGCATGGGTGGGGTTGGAAAAACCACTTTGGCAAGATCTGTGTTCAACGATGTCAAATTGAACCAGCAGATATTTGATTTAAAGGCATGGGTTTGTGTTTCGGATATATTTGATATTGTGAAGGTCACAAGAAGCATGATAGAGGAAATTACCCGAAAGCCTTGTAAATTGAGTGAAAGGGGCAGTAAAGTTCTGATCACAACCCGCAATGAAAATGTAGCGGCCGCAGTGCCTTATCATACTGTTGAAGTATATCATCTAAACAAATTGTCAAATGAAGATTGTTGGTTGGTATTTGCAAACCATGCATTTCCTCTCTCAGAAGCTAGTGAGACTAGAGGAACTCTAGAAAAGATTGGAAAGGAGATTGTTAAAAAGTGCAATGGGTTGCCGTTAGCGGCACAGTCACTTGGAGGAATGTTGAGAAGAAAGCAGACTATTAGGGATTGGAATAATGTACTTCAAAGTGACATTTGGGAACTTCCTGAAAAGCTGACTAAGTTGCCTAGTGCCATGCAAAATCTTGTAAACTTGCGTCATCTTGAAATTGGTGACAGTTCCATAAAAGAGATGCCTAAAGGAATGGGGAAACTAAACCAATTACAGAATTTGGAGTTTTATATTGTGGGCAAGCATAAAGAGAATAGCATCAAAGAACTGGGAGGACTTCCAAATCTCGGTGGTTCGTTTTCTATTAAGGCACTGGAGAATGTTACCAATGGCGAAGAAGCATTAGAGGCCAGGATAATGGATAAGAATCATATTAGCCATCTATCCTTGGAATGGTCTATAGCTAAGGACAATAGCATCGACTTCCAAATTGAGTTAGATGTTCTCAGCAACTTAGAACCTCATCAAGACCTTAAATCGTTGTCAATAAAGGGTTATAAAGGAACCAGATTTCCGGAATGGGTGGGGAATTTTTCCTACCGCTACATGACACGTATAGATTTATATAATTGTAACAACTGTTGCATGCTTCCTTTACTTGGGCAACTACCGTCACTCTCTGAACTTATTATTTCGAACATGAATTCGGTGAAGACTATCGATGCAGGCTTTTATAAGAACGATGATTGTTCATCTGTGACGCCCTTTCCATCCCTTGAAGATCTATGCATTTATAATATGCCTTGTTGGGAGGTGTGGAATGATTTTGATTCAGAAGCTTTTCCTTTGCTCAAGAATCTGTATATAGAAGAATGCCCCAAACTAAAGGGAGATCTCCCAAATCACCTTCCTGCTTTGCAAACACTCACCATTAGAAATTGCGAGCTTCTTGTCTATTCTGTCCCAGGGCCCCTCACCCTCCGAACACTAGAGATACGTAAAAGCGACAAAGTAACGTTTCATGGGTTTCCTCTTTTGGTGGAAGGTATAGATCTTGAAGGAGGCCCAGTGGTGGAGTCCATGATGGAGGCCATCGCTATCATCCAACCTACTTGCCTTAAATCTTTATTTTTACAGAATTGTTCGTCAGCCATATCTTTTCCAAGTGATCTTCTTGCTGCATCGCTGAAAAGTCTTAACATCAGTGGTTTAACCAAGATGAAATTCCCGATGCAACACAAACACAAATTACTGAAATCACTTTCAATAAATAATAGTTGTGATTCGCTCACGTCTCTTCCATTAGCTATCTTCCCAAATCTCACTAGTCTTAAAATCACAAACTGTGAAAATATGGAATCACTTTTGGTCTCAGGGTCAGAGTTGTCGATGAGTCTGAACTCTTTTGAGATTGGCCATTGTCCCAACTTTGTATCATTCCCGGGGGAAAGATTGTGTATGCCCAATTTGACTAGTTTCCGTGTTTATAATTGTGAAAAGTTGAAGTCGTTGCCCAATCATATGGAAACTCTTGTCCCAAAGATGGAATATCTTTACGTATCCAACTGTCAACAAATTGAGTCATTCCCTGGAGGAGGTATGCCGCCTAACTTGAGAACAGTTGAGATCAGCAATTGTGAGAAACTACTGAGGGGCCAGGGATGGAAATCGATGGACATGGTTAAATCTCTCGATGTGTGGGGTCCATGTGATGGCATCAAATCCTTCCCAAAGGAGAGTTTGCTACCTCCCTCCCTTGTGTCTCTACATCTATTTGATTTGTCTAGTCTGGAAACGTTAGATTGCAAGGGTCTTCAACATCTCACATCACTCCAAGAATTAAACATTGAAAGGACGGAATCCCATCTCATAACTACTGGTCTGCACTCACTTCAATGCACTGAATGA


Promoter Sequence:
>Vu_36028::LG11:10540790-10542790(-)
CAACTTTCAATTTAGTAATAGGAGACATAGAAAATGTGTTGACTTTGAATTCCATTATTCTTTTTCTGCTACTGTTTTATAACGGATAAAAGGTTTCTTTTGATATGTCTCCCTACATTCATTTACTTTCTAAAGTTTATGCCAGTCTTGGCAATTTTTACTCTGGTATGCAAATGTCTACTGCTAATACGTCTCAGTGATTTTTGTGTGTTTCTATAACTTTTCGATCAAAGTTCTGTTTTTGTTTAAATTATGAAATATTTAGCTAATTCTTATCTATTAAGTAATATGGTTATTGGAGTCCAAGGATGAAGAAAAAGACCAATAAATTGAATTTGTAAATTCAAGTTTATGTGTAATTTTCTAATAATCCATTGATAAAAAGTGTTCCCATGTTTACTCTTCACGATTTTTCAACAATTGGTATGTGAGTCCATAATTCATCTCATGAATAATGTGTCAAAATCTAGAAGAAAAGCTAATATATATTATACTATTTTAAGATTATTATATTATCAGATGAACCTCGTATAAGTCTTACTAAATAATAAATGAAGTTAAATAGATTAAAAAATAGCCTTTCATTGAACATGTGGCCTTTAAAGGTCAAAGTATAATAATCAAAATTATATTATTAAAAATAAAAGACTGTTCTAATGTTCATTTTTTTTAAATCACTACAAAATTCCAAATTTAGGAAAAACTATCAACACCATCACCACATTGTATACTGGAAAAAAAATTGTATTACAATCTCATTATTACAACATTTGCAAATACTTAAAAAGAAAGAGAGAATGATATAAACATAATAAACACTGCTTTTAACCTTAAAGCAATAGTTTTGTTGGTCTTTTTCCATTTAACTTTCTCATTGAACGTAGAATTTACATTCATACTTGAATTACTAACCCTTGCAACACTTGAATTACTAATCATTGCAACAAGTGCAAAGACTTTAAAATGAAAGCGGATTCTAAATTTCTTATACTCAATAGAAAGTTCTTTACTTATATTCAGTGATAAGGGTGCTTATGTATAAGTTTGTGTTGACAGTTTGTATCCTGATATGACAGCTTATGTATAAGTTTAGAATTTTATTCCTTCCCAAATGGATAACACCAAAGAGAAATATCAAGTTTCCAATTCACAATTTTAATCATTATTTGCAAGTCTAACTCACACTTGTTAGGTTAAACTTCAGTTTGTCACAACTGAATTTGACAAAAAGCTTGATAAACAAATTGAAAACTTTCATTTTTTTTATCAGTGTTGTGAAAATTTTCAGTGCAGTTCGATTCCAACACTGAATTTGATTCCGAGAACTGAATTTTGGTTTAGAAACAGAACACCAATGTAATGAATGTGATGGGATAAGAAAGAATGCCAAACCTGATCTCCAACTAAATCAAACAACCCAACAGTTCTTGGCGAAATCATGTTTTTCCCAGTGAAAAATTAATCAACTTTGACGAAACACTTGAATTCCACTGTATAAACTAGATAAAATTGCCACAGCCAGCAAGTATCTACAATCAAACAATTCCAATTTAACTTCAAATACTATATATGTTAAAAAAAATTAAATACTCAACTGATTAAATTCTATAATTATTTTTCCTACATACTTATAGGAAAGCAAACAAGATAAGAGCTAGTTAAAATCAATATAGACTAGAAATACTTCCACAAAAAGAAAATCTATTTCTTTTAACATGTCTTGATTCTCAGCAGTGTAATTTTTAATTAATATATTTATGGTTAATTTTCAAGAGGCATCAGACCATGAACCTTAATTTTTGAAAACGACAAACTACTAGACTTTTCAACTAAGCATCTTTAATTTCAACCATTAAAACTTTTAATAATATCCAACTAGTTAAGTGAAGTCTCTTTCCATCAGTTAACTCATCCAGAACCAGCCCAGTTTCTTGCAGCCAATTCCTTTCCTTTGCGTTTTTGTTTCCTTCTCTGATCATCACTTGTTTTCTGTTAAGATC


Gene Sequence:
>Vu_36028(-)
ATGGCATTAGCTGCGGTAGGTGGTGCGCTCCTTTCTGCTTTCTTTGACGTTCTTTTCGACCGGCTGGCCTCCCCTGAGGTTCTCAACTTTATCCGAGGAAAGAAGCCTGACAAGTTGCTTCGAAAGGTGAAAACCCAGCTGATAGTTGTTAGAGTTGTGCTTGCTGATGCTGAGGAGAGACAAATCACAGACTCCAATGTCAAAGAGTGGCTCGCTCTTCTCAGAGATGTTGTCTATGAGGTTGATGACTTACTCGATGAAGTTTCTACTAAAGCTGCTACTCAAAAGGAGGTAAGCAATTCATTTTCTCGCCTTTTCAAAACGAAGAAGATTGTTAGTATTAGTAAGTTGGAAGACATAGTTGAAAGATTAGATGACATTTTAAAACAAAAAGAGAGTCTTGATTTGAAGGAGATTCCAGTGGAGAGCTACCGGCCATGGAAAGCTCAGCCAACATCTTTGGAAGATGGATATGCTATGTACGGTAGAGATAATGATAAGGAGGCCATAATGAAGATGGTGTCAGTGGATAGCATCAATGGTGAAAGAGTGTCTATGATCTCTATTGTAGGCATGGGTGGGGTTGGAAAAACCACTTTGGCAAGATCTGTGTTCAACGATGTCAAATTGAACCAGCAGATATTTGATTTAAAGGCATGGGTTTGTGTTTCGGATATATTTGATATTGTGAAGGTCACAAGAAGCATGATAGAGGAAATTACCCGAAAGCCTTGTAAATTGAGTGAAAGGTAAAAAGTTATTGATTGTCTTGGATGATGTTTGGATCGAGGATTGTGACAATTGGAGTAGTCTTACAAAACCTTTTCTAAGCGGGATCAGGGGCAGTAAAGTTCTGATCACAACCCGCAATGAAAATGTAGCGGCCGCAGTGCCTTATCATACTGTTGAAGTATATCATCTAAACAAATTGTCAAATGAAGATTGTTGGTTGGTATTTGCAAACCATGCATTTCCTCTCTCAGAAGCTAGTGAGACTAGAGGAACTCTAGAAAAGATTGGAAAGGAGATTGTTAAAAAGTGCAATGGGTTGCCGTTAGCGGCACAGTCACTTGGAGGAATGTTGAGAAGAAAGCAGACTATTAGGGATTGGAATAATGTACTTCAAAGTGACATTTGGGAACTTCCTGAAAGTCAGTGTAAAATTATTCCGGCACTCAGAATTAGTTATAATTATCTCCCTCCACATTTAAAATGGTGTTTCGTTTATTGTTCACTGTACCCCAAAGATTATGAATTTAAAAAAGATGAACTGATCCAGCTGTGGATGGCTGAAGATTTTGTAAAACCAGCAAAAAAAGGAAAGACTTCAGAAGAAGTTGGTCAAGAGTATTTTGATGATTTAGTTTCGAGATGCTTTTTTCAATTTGCAAGTCGGAGTTTGGGTGATTACTTTGTAATGCACGACCTCATTCATGATCTAGCAACATTTCTTGGTGGGGACTTCTATTTCAGAACAGATGAACTTGGAAAAGAAACCAAAATCGATAGAAAAACTCGTCATTTGTCATTTACCAGATTTAGTGATCCAGTATCGGATATTGAAGTTTTCGACACAGTAAAATTTCCAAGAACTTTCTTGCTAATCAGTTACTAAGATTCTCCATTCAACAACGAAAACGCACCGCACATTATAGTGTCAAGGCTTAAGTACTTGAGAGTTTTATCGCTTATCAACTTTCAAAGTCAACGTGCTCTGCCTGATTCAGTTGGTGAATTGCTACATTTGCGTTATCTAAATCTCTCTCGTACAAGTATAGAAACCCTGCCGGAGTCACTGTGTAATTTGTGCAATCTACAAACTCTGAAGTTGTCCTTTTGTTCAGAGCTGACTAAGTTGCCTAGTGCCATGCAAAATCTTGTAAACTTGCGTCATCTTGAAATTGGTGACAGTTCCATAAAAGAGATGCCTAAAGGAATGGGGAAACTAAACCAATTACAGAATTTGGAGTTTTATATTGTGGGCAAGCATAAAGAGAATAGCATCAAAGAACTGGGAGGACTTCCAAATCTCGGTGGTTCGTTTTCTATTAAGGCACTGGAGAATGTTACCAATGGCGAAGAAGCATTAGAGGCCAGGATAATGGATAAGAATCATATTAGCCATCTATCCTTGGAATGGTCTATAGCTAAGGACAATAGCATCGACTTCCAAATTGAGTTAGATGTTCTCAGCAACTTAGAACCTCATCAAGACCTTAAATCGTTGTCAATAAAGGGTTATAAAGGAACCAGATTTCCGGAATGGGTGGGGAATTTTTCCTACCGCTACATGACACGTATAGATTTATATAATTGTAACAACTGTTGCATGCTTCCTTTACTTGGGCAACTACCGTCACTCTCTGAACTTATTATTTCGAACATGAATTCGGTGAAGACTATCGATGCAGGCTTTTATAAGAACGATGATTGTTCATCTGTGACGCCCTTTCCATCCCTTGAAGATCTATGCATTTATAATATGCCTTGTTGGGAGGTGTGGAATGATTTTGATTCAGAAGCTTTTCCTTTGCTCAAGAATCTGTATATAGAAGAATGCCCCAAACTAAAGGGAGATCTCCCAAATCACCTTCCTGCTTTGCAAACACTCACCATTAGAAATTGCGAGCTTCTTGTCTATTCTGTCCCAGGGCCCCTCACCCTCCGAACACTAGAGATACGTAAAAGCGACAAAGTAACGTTTCATGGGTTTCCTCTTTTGGTGGAAGGTATAGATCTTGAAGGAGGCCCAGTGGTGGAGTCCATGATGGAGGCCATCGCTATCATCCAACCTACTTGCCTTAAATCTTTATTTTTACAGAATTGTTCGTCAGCCATATCTTTTCCAAGTGATCTTCTTGCTGCATCGCTGAAAAGTCTTAACATCAGTGGTTTAACCAAGATGAAATTCCCGATGCAACACAAACACAAATTACTGAAATCACTTTCAATAAATAATAGTTGTGATTCGCTCACGTCTCTTCCATTAGCTATCTTCCCAAATCTCACTAGTCTTAAAATCACAAACTGTGAAAATATGGAATCACTTTTGGTCTCAGGGTCAGAGTTGTCGATGAGTCTGAACTCTTTTGAGATTGGCCATTGTCCCAACTTTGTATCATTCCCGGGGGAAAGATTGTGTATGCCCAATTTGACTAGTTTCCGTGTTTATAATTGTGAAAAGTTGAAGTCGTTGCCCAATCATATGGAAACTCTTGTCCCAAAGATGGAATATCTTTACGTATCCAACTGTCAACAAATTGAGTCATTCCCTGGAGGAGGTATGCCGCCTAACTTGAGAACAGTTGAGATCAGCAATTGTGAGAAACTACTGAGGGGCCAGGGATGGAAATCGATGGACATGGTTAAATCTCTCGATGTGTGGGGTCCATGTGATGGCATCAAATCCTTCCCAAAGGAGAGTTTGCTACCTCCCTCCCTTGTGTCTCTACATCTATTTGATTTGTCTAGTCTGGAAACGTTAGATTGCAAGGGTCTTCAACATCTCACATCACTCCAAGAATTAAACATTGAAAGGTGTCAAAAGCTGGAGAATATTGCGGGAGAAAAGCTGCCTTTCTCTCTAATAAAATTAATGATATATGAATGTCCCTTGCTGAAACAACGATGCCACAAAAAGGACAGTCAAATTTGGCCTAAAATCTGCCATGTCCGTGGGATAAAGATTGACGGTAGATGGATTTAACGAGCATGGATAATGAGAAGGTCATCGTTCTCCTTCTTTCACTTACATCATCAACCTTTAACCATGAAAAAATATTTTTGTCTGTGTTATCTTTCATTTCTTGTCTTTCTCCTTTCAAATTTAACTTAATTAATATTGCATTCAACCAGTCTTAAATTAGTTTGTAATATGGGAGACAGATAATTTTCACTGAAATTTCATTTAAAGGGGTAAATTGAAGTAATGTTGTCTCTTCATGTTTTCTAAACACAAGTTTATAATTATTTTATATAAAATTAATCAAACGGCTGGTTGTGGTCAAAATTAAATTAATGACAAGAAGGGTGGTATTTGTTTTTCAGACAAGCTGGATTAGTTTGGAGAAACTGCACCTGTCCATCGTAATGTAGTGCCCTAAGGAGGTCATCACTTTTGTGTTTGACTGATGGATTTGGGTTGAATGCATCTGAAAGCTATATCCCAGCATGTAGAGGTTGAATTTCTCATGCTGCTTATTATGCATTTGAATTCTGTGTATATGTTGAAAGGACGGAATCCCATCTCATAACTACTGGTCTGCACTCACTTCAATGCACTGAATGA