Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_35893 LG11 7195913 7198192 PREDICTED: putative disease resistance RPP13-like protein 1
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/C 7195946 missense_variant p.Gln469Arg
C/A 7196215 stop_gained p.Glu409*
A/G 7196344 missense_variant p.Ser366Pro
G/A 7196352 missense_variant p.Ser363Phe
C/T 7196451 intron_variant
A/T 7196495 intron_variant
C/T 7196497 intron_variant
A/G 7196509 intron_variant
T/C 7196568 intron_variant
G/T 7196718 intron_variant
G/A 7196756 stop_gained&splice_region_variant p.Gln352*
A/T 7196757 synonymous_variant p.Leu351Leu
C/T 7196802 synonymous_variant p.Thr336Thr
G/T 7197264 missense_variant p.Pro310His
A/G 7198050 missense_variant p.Leu48Pro
A/G 7198118 synonymous_variant p.Pro25Pro

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_35893.1
MALSVVGGALLSAFIEVVFDKLASPELVNFIRWKKPDKLLQKMRSQLLVVKVVLDDAEKRQITDSNVKEWLDLLNDVLYEVDDLLDEVSTKAATQKEVTNSFSHLFNRKKIFSISKLEDILGRLDDILRQKQNLDLKDIPVENNQPWKPQPTSLEDRYHIYGRYEDKETIMKLVLEDSSDGEEVSVIPIVGMGGVGKTTLARSVYNDGKLKQIFDLKAWVCVSDIFDIVKITKTMIEEIIQKPCKLNDLNSIQLDLWDKLRGKRFLIVLDDVWMEDCDSWSSLTKPFLSGIRGSKVLMTTRNENVAAAVPSHSVKVSCKSTKKGKTLEQVGKEYFDELVSRSLFQSSSHRTSGIATLPESLCNLYNLQTLKLYCCSELTKLPGAMQNLVNLRHLEILNTSIKEMPKAMRKLNQMQNLDFYIAGKHIENSIKELRGLPNLHGSFCIQKLENVTQGEEALEARCTQQLTTSPRPEITFNKRL*


CDS Sequence:
>Vu_35893.1
ATGGCATTATCTGTTGTAGGTGGTGCACTCCTTTCTGCTTTCATTGAGGTTGTATTTGACAAATTAGCTTCCCCTGAGCTTGTAAACTTCATCCGTTGGAAGAAGCCTGACAAGTTGCTTCAAAAGATGAGGAGCCAGCTGCTAGTGGTTAAAGTTGTGCTTGATGATGCTGAGAAGAGGCAAATCACAGACTCCAATGTCAAAGAGTGGCTCGATCTTCTCAATGATGTTCTGTACGAGGTTGATGACTTACTTGATGAAGTTTCTACGAAAGCTGCTACTCAAAAGGAGGTAACCAATTCCTTTTCACATCTTTTCAACAGAAAGAAAATTTTTAGTATTAGTAAGTTGGAAGACATACTGGGAAGATTAGATGACATTTTGAGACAAAAGCAGAATCTTGATTTGAAAGATATTCCTGTGGAGAACAACCAGCCATGGAAACCTCAGCCAACATCTCTGGAAGATAGATATCATATATACGGTAGGTATGAAGACAAGGAAACCATTATGAAGTTGGTGTTAGAAGATAGCAGTGATGGTGAAGAAGTGTCTGTGATCCCTATAGTTGGCATGGGTGGGGTTGGAAAAACCACTTTGGCCCGATCTGTGTACAACGATGGCAAATTGAAGCAGATATTTGATTTAAAGGCATGGGTTTGTGTTTCTGATATATTTGATATTGTGAAGATCACAAAAACTATGATAGAGGAAATTATTCAAAAGCCTTGTAAATTGAATGATCTAAACTCAATTCAACTTGACTTGTGGGACAAACTGAGGGGTAAAAGATTCTTGATTGTATTGGATGATGTTTGGATGGAGGATTGTGATAGTTGGAGTAGTCTTACGAAGCCATTTCTAAGTGGGATTAGGGGAAGCAAAGTTCTCATGACAACCCGCAATGAAAATGTAGCGGCTGCAGTCCCTTCTCATAGTGTTAAAGTATCTTGTAAAAGCACCAAAAAAGGAAAGACTTTAGAACAAGTTGGCAAGGAGTATTTTGACGAATTGGTTTCAAGATCGCTTTTCCAAAGTTCAAGTCATCGGACTTCAGGTATAGCAACACTGCCGGAGTCATTGTGTAATCTATACAATCTACAGACTTTGAAGTTGTATTGTTGCTCTGAGCTGACTAAGTTGCCTGGTGCCATGCAAAATCTTGTAAACTTGCGTCATCTTGAAATTCTTAATACTTCCATAAAGGAGATGCCTAAAGCAATGAGGAAACTAAATCAAATGCAGAATTTGGATTTCTATATTGCCGGTAAGCATATAGAGAATAGCATCAAAGAACTGAGAGGACTTCCAAATCTCCATGGTTCCTTTTGTATTCAGAAACTAGAGAATGTTACTCAAGGTGAAGAAGCATTAGAGGCCAGATGTACTCAGCAACTTACAACCTCACCAAGACCTGAAATCACTTTCAATAAGCGGCTATAA


Promoter Sequence:
>Vu_35893::LG11:7198192-7200192(-)
AAGATCTTGAGAAATCTGACGGATGATTTTGAAAGTATTGAGGTCACTATTGAAGAGACAAAAAATTTTTCAACTCTCATTGTGGAGGAGTTAGCTGGGTCATTAAAAGCCCATGAATTGAGGAAGAAGAAGAAAAAGAGGGAACCCGACGATCAAGCACTACAAGCAAAGTTTGACTCAAATGGAACTCGGAATACTCAAAGTCGAGGTCCTTGAGGTAGAGGATGAAGAGGCCGTGGACAAGGTGGACGTGGTCGGGGTAATGTTGAGATAATACTGAAGAGAAAATTGGCCAGCAGAATTAGCATGACGAGGGTAATGAAAAGGTCGAGGAGATCAGTTAGGAGTATAATGTTTTAAGTGTGGCAAGAACGATCACTGTAAGACCTAAGCAAGCTCAAGGCCTATAAAGTTGCTCAAACCTAAGTACTAGTGTAAAATAGAAAGTTGTCTAACCTTTATTTTTTTTTTCTCATAACTCCTTATACAAAATTTCAACTGAGTCGATTCTTTTCTGATAGAAAGTAGACTCAAAGAGCTTCAATTTGATTACTTATATGCATATCTTTTATCTTGGGAATGTGCTCAACCAAATTGGAGAAGTTGCAAAAAGTTTATTTCAAAATTTTGTGTGTTAATTGATTAAAATTTATGTTAATCGTCGATTAAAATTGAAATTAATCTATTATTCTAGTGAGAGATTCTTGTTTTGGGTCTCTAAGCTTAAAATATTCAATTATCACCTATTTTAATCAATTATTTACGTTTATTTACGTCAGGAATGGAAACATGGTAACTTGGAACACATTTTCTTGCGTGGAAAAGTGGGAATATTCTCGAGCTTAAAAAAATTGAAGGTCAATTCCTTTAAATTAAATGAATATCCACCGACCTCGTCAACACAAGATTAATAATTTGGATAATTTTTCCAAACAACTCAACTATACACTCATATAAACTATTTTTCTATTGAAATAATATTTTTATAAAACATATAATAACAATATAGTAAATAAATAAGATAAATAATAACCAACGCTGTTAATTATAATATGTGAATATGATAAAAAATAAGTGTAAGTTTGGATTATTTTATAGTAAAAAGAATTAAAAAATCTTATTAGATCATATTCTATTAGGTCACGCAAAAACAATTTGACAAAACTGAAAAGCGATTCCAAAGAACATAAAACCAGTACAAGTAGTGTAGTTAAATAAATTGTTCTATATTAGAATTTAACTGATTTATTATGTCTACAAGAGTTATGCACCCAAACAGAATGAGCACTGTACACGCGGCATAAAAGTGTTGCAAACCTACTCAAGGGGATCATAAGATGCTTGCAGATGAACATTAAGGATACAAGTTCTCCATCTTCCAAAGTTCCGTCTTCCCGCGTCATTCTTAATTTGCTATATTTTTCACATATTAATTCAATCACGGCTACATGTATTGTGTCATTACCAATAGTTGGACGAGGCTGTACGACAAACAATTTCACTATGTTATATAATTCTTTTCATAGACACTGAAAAAATGAAAAAGAAAATATACTAAATGTCTTTAATTAACTAAAATCAACTTATACCCTTTAGTTCTTTGAAATATTAGATGAGAACAAACCTAAAAAATACAAAACTGGTATTCCATTTCACGGTCTTCAATCTCAACCGTTGAAATTTTAATTAATATATGCATGGTGAATTTACATGGTACATACATTTCCTGACGTTCCGCGTTAAAAAGCATGGAAACATGAACCTTCAGTTTTGAAAATGACACCCACCACCACCGAACATTTCAGGTAGGCATCTTGAATGTCTACCATTTGTAACATCTAACGGTTAATTTTGAGAGTAGGTATTTCAGAACTGTACAACTTAAGTGAAGAGAGTTGACTGAAATTGCTTTCCTTTCCGATCACATCTCTCAACAAACAGTTTTCTGCAACCGATTCCTTTCCTTTGCGATAAATAATCACTTGCTTGCTGTTGAGATC


Gene Sequence:
>Vu_35893(-)
ATGGCATTATCTGTTGTAGGTGGTGCACTCCTTTCTGCTTTCATTGAGGTTGTATTTGACAAATTAGCTTCCCCTGAGCTTGTAAACTTCATCCGTTGGAAGAAGCCTGACAAGTTGCTTCAAAAGATGAGGAGCCAGCTGCTAGTGGTTAAAGTTGTGCTTGATGATGCTGAGAAGAGGCAAATCACAGACTCCAATGTCAAAGAGTGGCTCGATCTTCTCAATGATGTTCTGTACGAGGTTGATGACTTACTTGATGAAGTTTCTACGAAAGCTGCTACTCAAAAGGAGGTAACCAATTCCTTTTCACATCTTTTCAACAGAAAGAAAATTTTTAGTATTAGTAAGTTGGAAGACATACTGGGAAGATTAGATGACATTTTGAGACAAAAGCAGAATCTTGATTTGAAAGATATTCCTGTGGAGAACAACCAGCCATGGAAACCTCAGCCAACATCTCTGGAAGATAGATATCATATATACGGTAGGTATGAAGACAAGGAAACCATTATGAAGTTGGTGTTAGAAGATAGCAGTGATGGTGAAGAAGTGTCTGTGATCCCTATAGTTGGCATGGGTGGGGTTGGAAAAACCACTTTGGCCCGATCTGTGTACAACGATGGCAAATTGAAGCAGATATTTGATTTAAAGGCATGGGTTTGTGTTTCTGATATATTTGATATTGTGAAGATCACAAAAACTATGATAGAGGAAATTATTCAAAAGCCTTGTAAATTGAATGATCTAAACTCAATTCAACTTGACTTGTGGGACAAACTGAGGGGTAAAAGATTCTTGATTGTATTGGATGATGTTTGGATGGAGGATTGTGATAGTTGGAGTAGTCTTACGAAGCCATTTCTAAGTGGGATTAGGGGAAGCAAAGTTCTCATGACAACCCGCAATGAAAATGTAGCGGCTGCAGTCCCTTCTCATAGTGTTAAAGTGTATCATCTAAACAAATTGTCAAATGAAGATTGTTGGTTGGTGTTTGCAAACCATGCATTTCTGTCTCAAGAGGCAGTGGGAACAGAGGAACTCTAGAAAAGATTGGAAAAGAGATTGTTAAAAAGTGTAATGGATTGCCTTTAGCAGCACAGTCACTTGGAGGAATGTTGAGAAGAAAACACTCTATTAGGGATTGGAATAATGTACTTGAAAGTGACATTTGGGAACTTCCTGAAAGTCAGTGTAAAATTATTCCAGCACTTAGAATTAGTTATAATTATCTTCCTCCACATTTAAAACGGTGTTTTGTTTATTGTTCATTGTATCCCAAAGATTACAAAATTCAAAAGGATGAACTGATCCTGTTGTGGATGGCTGAAGATCTTGTAAAAGCACCAAAAAAGGAAAGACTTTAGAACAAGTTGGCAAGGAGTATTTTGACGAATTGGTTTCAAGATCGCTTTTCCAAAGTTCAAGTCATCGGACTTCAGGTAATTGTTTTCTGATGCATGACCTCATGCACGATCTAGCAACTTTCCTTGGCGGGGAATTCTATTTCAGAGCAGATGAACTTAGTAAAGGAACCAAAATTAACAGAAAGACTCGTCATTTGTCTTTTACAAGATTCAGTGACCCAGTCTCGGATATTGAAATTTTTAAAACAGTTAAATTTTCAAGAACTTTCTTGCCGATCAATTATAAAGATTCTCCATTCAACAATGAAAAGGCACCACGTATTATAGGGTCGATGCTCAAGTACTTGAGAGTTTTATCATTTCGTGACTTCCAAAGTGTGCTTGCTCTGCCTGATTCAATAGGTGAATTGATCCATTTGCGTTATTTAAATCTCTCTTATACAGGTATAGCAACACTGCCGGAGTCATTGTGTAATCTATACAATCTACAGACTTTGAAGTTGTATTGTTGCTCTGAGCTGACTAAGTTGCCTGGTGCCATGCAAAATCTTGTAAACTTGCGTCATCTTGAAATTCTTAATACTTCCATAAAGGAGATGCCTAAAGCAATGAGGAAACTAAATCAAATGCAGAATTTGGATTTCTATATTGCCGGTAAGCATATAGAGAATAGCATCAAAGAACTGAGAGGACTTCCAAATCTCCATGGTTCCTTTTGTATTCAGAAACTAGAGAATGTTACTCAAGGTGAAGAAGCATTAGAGGCCAGGTTAATGGATAAGAAGCACATAAACGACTTATCCTTGGAATGGTCTATACGTAACGACAATAGCACCAACTTCCAAATTGAATTAGATGTACTCAGCAACTTACAACCTCACCAAGACCTGAAATCACTTTCAATAAGCGGCTATAA