Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_35892 LG11 7187539 7189146 PREDICTED: putative disease resistance RPP13-like protein 1
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 7187568 missense_variant p.Arg364Lys
A/G 7187731 intron_variant
C/T 7187788 intron_variant
G/T 7187939 intron_variant
C/T 7187944 intron_variant
T/C 7188025 intron_variant
T/A 7188536 missense_variant p.Glu204Val
A/C 7188918 missense_variant p.Phe77Val
T/G 7188936 missense_variant p.Lys71Gln
G/A 7188974 missense_variant p.Thr58Ile
G/C 7188991 synonymous_variant p.Val52Val
A/C 7189036 synonymous_variant p.Leu37Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_35892.1
MPCWEAWVAFHSEAFLVLKDLYIQNCPKLKGDLPDHLPALQTLAIRNCELLVSSVPGTPTLRTLEISESNKVAFHSFPLLVERIEIEGSPVVESMMEAITNIQPTCLHHLSIKDCSSDISFPGDHLPISLKTLIISGLNKLKFPMQHKHELLESLSVNSSCDSLTSLPLVSFPNLVRLQITNCENMESLSVLGSDSFKSLSSFEIGRCPNFVSFSGEALSAPNLTGFIVYDCDKLKSLPNQMCTLLPKMEYLSISNCQQLESFPEGGMPPNLRIVEINNCEKLLSGQPWVSKDIFTYLKVWGPCDGINSFPKEGLLPPSLTSLQLFGFSSLESLECKGLLHLTSLRELLIQSYEDDRVAEIRDEEGAMKNRRE*


CDS Sequence:
>Vu_35892.1
ATGCCTTGTTGGGAGGCGTGGGTTGCCTTTCATTCAGAAGCTTTTCTTGTGCTCAAGGATCTTTATATACAAAACTGCCCCAAACTAAAGGGAGATTTGCCTGATCACCTTCCTGCTTTGCAAACACTCGCGATTAGAAATTGCGAGCTTCTTGTCTCTTCTGTTCCAGGGACTCCCACCCTTCGAACATTAGAGATAAGTGAAAGCAACAAAGTAGCATTTCATTCTTTTCCTCTTTTGGTAGAACGTATAGAGATAGAAGGAAGCCCAGTGGTAGAGTCCATGATGGAGGCCATCACTAACATTCAACCTACTTGCCTCCATCATTTGTCAATTAAGGATTGTTCGTCAGACATATCTTTTCCAGGTGATCATCTTCCTATATCGCTGAAAACTCTGATTATCAGTGGATTAAACAAACTCAAATTCCCAATGCAACACAAACATGAATTACTGGAATCACTATCAGTAAATAGTAGTTGTGATTCACTAACGTCTCTCCCACTAGTTAGCTTTCCAAATCTCGTACGTCTGCAAATCACAAACTGTGAAAATATGGAATCACTTTCAGTCTTAGGGTCAGATTCATTTAAGAGTTTGAGTTCTTTTGAGATTGGCCGTTGCCCCAACTTTGTGTCATTCTCGGGAGAAGCATTGTCTGCACCCAATTTGACTGGTTTCATTGTTTATGACTGTGATAAGCTGAAGTCGTTGCCCAATCAGATGTGTACTCTTCTCCCAAAGATGGAATATCTTAGCATATCAAACTGCCAACAACTTGAGTCATTTCCTGAAGGGGGTATGCCACCTAACTTGAGAATAGTAGAGATCAACAATTGTGAGAAACTACTGAGCGGCCAACCATGGGTATCCAAGGACATCTTTACCTATCTCAAAGTCTGGGGTCCATGTGATGGCATCAACTCCTTCCCAAAGGAGGGTTTGTTGCCTCCCTCCCTCACGTCTTTGCAGCTATTTGGTTTTTCAAGTCTGGAGTCGTTGGAGTGCAAGGGCCTTCTCCATCTCACATCGCTACGAGAATTGCTCATTCAAAGTTATGAAGATGACAGAGTGGCTGAGATAAGGGATGAAGAGGGAGCAATGAAAAATCGAAGAGAATAA


Promoter Sequence:
>Vu_35892::LG11:7189146-7191146(-)
TTCCCGTCAATGGTATCTAAAATTTAATGATACCATAACTTCGTATGGTTTTGTAGAGAACACCGTTGATCGGTGTATATACATAAAGGTCAGTGGGAGTAAGTTTGTTATTTTGGTTCTATATGTTGATGATATTCTTCTTGCTACTAATGATATTGGTATGTTACATGATGTAAAGAAGTTTCTCTCTAACAACTTTGAAATGAAAGATATGAATGAGGCATCTTATGTGATAGGAATAGAAATATTCCGTGATAGATCACAAGGATTGTTAAGTTTGTCTCAAAAAGGCTATATTAATAAAGTGTTAGAGAGATTCAGAATGGAAAAATGTTCTCCTGGAATAGTTCCAATTCAAAAAGGAGACAAGTTTAGTCAAATGCAATGTCCCAAGAATGATTTGGAACGAAAGGCCATGGAGTCCATTCCTTATGCGTCAGTGGTTGGGAGTTTGATGTATGCTCAAACTTGTACTCGGCCAGATATCAATTTTGCTGTTGGAATGTTAGGTCGATATCAAAGTAATCTCAGAATGGATCACTGGAAAGCTGCAAAGAAAGTTCTTAGGTACTTACAAGGTACCAAAGAATACATGCTCACTTATAGAAAGTCAGATCATCTCGAAGTGATTGGCTATTCGGATTCAGACTATGCTGGGTGTGTGGATTCAAGAAAATCCACATTTGGGTATGTCTATCTTTTGGCTGGAGGAGCAATTTCTTGGAAAAGTGCAAAACAATCAGTTATTGCTACTTCCACCATGGAGGCTGAATTCGTGGCATGCTTTGAGGCCACAGTTCATGCCTTGTGGTTGCGGAACTTTGTATTGAGGCTTGGCATTATTGACAGTATAGCTAGGCCGATAAGGATTTATTGTGATAATTTTGCAGCCGTCTTCTTCTCTAAAAATGATAAGTACTCAAAGGGTGCTAAACACATGGTTTTGAAGTACTTGTCAGTCAAAGAAGAAGTGCAGAAACATAGAGTGTTGATTGAGCATATTGGTACGGATTTGATGATAGCAGATCCGTTAACTAAAGGACTACCGCCCAAAACTTTTATTGGCCATGTTGAAAGTATGGGCATTATGGATAAGTCAATGTTAACATGATATTGTTATCTATCTATATAGATATGTATAGTTATATGCTTGTACTGTCATGACACTTGTGAATTCAATTAAAGTTATGTTTCTCTTTATTCTATTGTTATCCACATTAAATTATATACATGTATTCTTGATTGTGGTGACATGATAGGTCTCCTTTAGAGACATAAAAGTTATAAGATTGATTAAAGTTATGTTGAGTTGTTTTGATTATGTGATACATGGAAGGAATCTTGTCGATCATGACTTTTGCCCGCCATGATCCGATTATTTCAATTCATATAAGGATGATGACTTGATAATTCTAATGAATGGTGCGCACTTAAAGTTTATTTTAGATCTTCAAGTCATCACATGAACCAAGTGGGAGAATGTTAAATTATATTAATAATTTACATTGGTTCATGTAATTTAAAGTATAACTTTGATGTAAGGATTCTAATGTGATGATTATTAGAATATTAAAGTATTAAAGTTATTGGGATTATTTTAGAGTTATTAAAATTAATCCCTCTCTTCTCACTCCAAAAGGGCATTTTGGTATTTTATTAAAGTTAATTAAAATATCATAAAAGAGGAAAAAGTTTTACTTCTGTTGATTTTAAGTTTCTGAAGAGATATAGAGAACGTAACGTTCTCAGGAAAGAATAGAAACTGACAGAGAAAACCATCCTACAACTTCTATATCATCCAGAAGGCATTAAAGAGGAGTAAGAGGAGAGAGAACAATTGACAGGAAAAAGACAGGAAGAAGTGCACAATGGATCCAGGTTAGTTCTTCTTTACTGTGTATGAGAAAATAGTGAGTATCATGAAAATTCAAGATCCTGTGTAATTTTCATTCAATTAAAAATTAAAGAAAAGTTTACATGAATCTCTATACATTTATAAT


Gene Sequence:
>Vu_35892(-)
ATGCCTTGTTGGGAGGCGTGGGTTGCCTTTCATTCAGAAGCTTTTCTTGTGCTCAAGGATCTTTATATACAAAACTGCCCCAAACTAAAGGGAGATTTGCCTGATCACCTTCCTGCTTTGCAAACACTCGCGATTAGAAATTGCGAGCTTCTTGTCTCTTCTGTTCCAGGGACTCCCACCCTTCGAACATTAGAGATAAGTGAAAGCAACAAAGTAGCATTTCATTCTTTTCCTCTTTTGGTAGAACGTATAGAGATAGAAGGAAGCCCAGTGGTAGAGTCCATGATGGAGGCCATCACTAACATTCAACCTACTTGCCTCCATCATTTGTCAATTAAGGATTGTTCGTCAGACATATCTTTTCCAGGTGATCATCTTCCTATATCGCTGAAAACTCTGATTATCAGTGGATTAAACAAACTCAAATTCCCAATGCAACACAAACATGAATTACTGGAATCACTATCAGTAAATAGTAGTTGTGATTCACTAACGTCTCTCCCACTAGTTAGCTTTCCAAATCTCGTACGTCTGCAAATCACAAACTGTGAAAATATGGAATCACTTTCAGTCTTAGGGTCAGATTCATTTAAGAGTTTGAGTTCTTTTGAGATTGGCCGTTGCCCCAACTTTGTGTCATTCTCGGGAGAAGCATTGTCTGCACCCAATTTGACTGGTTTCATTGTTTATGACTGTGATAAGCTGAAGTCGTTGCCCAATCAGATGTGTACTCTTCTCCCAAAGATGGAATATCTTAGCATATCAAACTGCCAACAACTTGAGTCATTTCCTGAAGGGGGTATGCCACCTAACTTGAGAATAGTAGAGATCAACAATTGTGAGAAACTACTGAGCGGCCAACCATGGGTATCCAAGGACATCTTTACCTATCTCAAAGTCTGGGGTCCATGTGATGGCATCAACTCCTTCCCAAAGGAGGGTTTGTTGCCTCCCTCCCTCACGTCTTTGCAGCTATTTGGTTTTTCAAGTCTGGAGTCGTTGGAGTGCAAGGGCCTTCTCCATCTCACATCGCTACGAGAATTGCTCATTCAAAGTTGTAAAAAGCTGGCGAATATCGTGGGAGAAAGGCTGCCCATCTCTCTAATAAATTAAGCATTAACAGATGTCCCTTGCTGCAGAAACGATGCCACATAAAGGATCGTCAAATTTGGCCTAAAATCAGCCATGTCCGTGGGATAAACGTTGACGGTAGATGGATTCAGTGAGGAAGGATGGTCAGCAGGTGATTCTCCTTCTTTGACTTACTCATCAACATCTAACAATGAAAAACTATTTCTGTCAACGTTATGTTTCATTTCATGTTTTCCCTTTCACATTTAATAATTCCTAAATTACTTGATTGTTCGGTTTGATACTTGACAGGAATTGCAACTATAAAGAAACCTAACATTTTGTTTATATTTTATTTACATAGAACATTCATGTTATCTTATATCAAACGCACTTGCATAATCTTTAACATCTAACCATTTTCAAATTCTATGGTAGACATATCTGAAGTTTTGTTTCTCAACAATTGTAGATGAAGATGACAGAGTGGCTGAGATAAGGGATGAAGAGGGAGCAATGAAAAATCGAAGAGAATAA