Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_35877 LG11 6909862 6913606 PREDICTED: receptor protein kinase-like protein ZAR1
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/C 6909920 missense_variant p.Ile20Thr
A/G 6909923 missense_variant p.His21Arg
A/G 6909962 missense_variant p.Gln34Arg
T/C 6909974 missense_variant p.Phe38Ser
C/T 6910098 synonymous_variant p.Gly79Gly
A/C 6910143 synonymous_variant p.Ile94Ile
G/A 6910167 synonymous_variant p.Val102Val
C/T 6910260 synonymous_variant p.Asp133Asp
T/C 6910341 synonymous_variant p.Leu160Leu
C/T 6910357 missense_variant p.His166Tyr
T/C 6910383 synonymous_variant p.Leu174Leu
A/C 6910390 missense_variant p.Ile177Leu
C/T 6910473 synonymous_variant p.Ala204Ala
A/T 6910581 intron_variant
C/T 6910600 intron_variant
G/T,* 6910656 intron_variant
T/A 6910788 missense_variant p.Ser223Thr
C/A 6910833 synonymous_variant p.Arg238Arg
T/C 6910920 missense_variant p.Cys267Arg
G/A 6910968 missense_variant p.Gly283Arg
A/C 6911002 missense_variant p.Lys294Thr
A/T 6911016 stop_gained p.Arg299*
A/G 6911027 synonymous_variant p.Glu302Glu
G/T 6911080 stop_lost p.Ter320Leuext*?
T/C 6911082 stop_lost p.Ter321Argext*?
G/T 6911100 missense_variant p.Gly327Cys
C/T 6911163 stop_gained p.Arg348*
A/G 6911166 missense_variant p.Thr349Ala
T/G 6911256 missense_variant p.Cys379Gly
A/T 6911289 missense_variant p.Thr390Ser
A/G 6911313 missense_variant p.Arg398Gly
A/T 6911320 missense_variant p.Tyr400Phe
G/A 6911340 missense_variant p.Ala407Thr
T/A 6911394 missense_variant p.Ser425Thr
T/C 6911418 missense_variant p.Trp433Arg
C/A,* 6911427 missense_variant p.His436Asn
A/T 6911440 stop_lost p.Ter440Leuext*?
C/A 6911477 intron_variant
T/A 6911485 intron_variant
C/T 6911503 intron_variant
A/G 6911614 intron_variant
C/G 6911619 intron_variant
A/G 6911631 intron_variant
G/T 6911642 intron_variant
A/T 6911643 intron_variant
T/C 6911649 intron_variant
A/T 6911660 intron_variant
C/T 6911669 intron_variant
T/C 6911761 intron_variant
G/A 6911804 intron_variant
G/A 6911831 intron_variant
C/G 6911858 intron_variant
G/A 6911878 intron_variant
G/T 6911885 intron_variant
T/G 6911889 intron_variant
T/A 6911896 intron_variant
G/T 6911897 intron_variant
T/C 6911908 intron_variant
G/C 6911924 intron_variant
T/C 6911946 intron_variant
C/T 6911977 intron_variant
T/G 6911990 intron_variant
T/C,A 6912063 intron_variant
G/T 6912074 intron_variant
A/T 6912109 intron_variant
A/T 6912124 intron_variant
G/A 6912174 intron_variant
T/A 6912182 intron_variant
A/G 6912311 intron_variant
G/A 6912339 intron_variant
T/C 6912365 intron_variant
A/T 6912371 intron_variant
T/G 6912564 intron_variant
A/G 6912596 intron_variant
T/A 6912602 intron_variant
T/A 6912609 intron_variant
G/T 6912638 intron_variant
G/A 6912641 intron_variant
A/G 6912717 intron_variant
T/G 6912816 intron_variant
A/T 6912897 intron_variant
A/G 6912927 intron_variant
A/T 6912935 intron_variant
C/T 6913270 stop_gained p.Arg541*
C/T 6913312 missense_variant p.Arg555Cys
T/C 6913406 missense_variant p.Leu586Pro
G/T 6913502 missense_variant p.Gly618Val
G/T 6913507 missense_variant p.Gly620Cys

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_35877.1
MPSSSVLTFLFQNGCVPITIHFKTNMTHSLFLFQFLVFIFHVLFTFIPALSLSSDGLALLALKSAIDQPSSAFSDWNDGDVTPCAWSGIVCANISGEEDPRVVGISLAGKSISGYLPSELGTLRFLRRLNLHDNAFSGVLPAQLSNATALHSLFLHRNNLSGPIPHSLCSLPRLQNIDLSENAFSGHIPDLLGNCKNLQRLIVAGNRFSGPTAFLGNPNLCGFPLRKSCSGSDRDFSPGSDQNKPVHRSKGLSPGLIILISAADAAVVAFIGLVIVYVYWKKKDDENACSCIRRRKFGEEKGNVCFCGGFPCVSGEKSDDDDDEDYEVEAAEGEGEGELVRIDKGLSFELDELLRASAYVLGKSGLGIVYKVVLGNGVPVAVRRLGEGGEQRYKEFAAEVMAIGKVKHPNVVRLRAYYWAHDEKLLISDFISNGNLTHALRGRNGQPSTNLSWSTRLKIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNEFQPYISDFGLNRLISITGNNPSTGGFMGGALPYMKSSQKERTDNYKAPEARVPGCRPTQKWDVYSFGVVLLEILTGRSPESSPTTSTSMEVPDLVRWVRKGFDQESPLSEMVDPSLLQEVRVKKEVLAVFHVALACTEGDPEARPRMKTVSENLDKIGT*


CDS Sequence:
>Vu_35877.1
ATGCCATCTTCGTCGGTTCTTACATTCCTCTTCCAAAACGGCTGCGTTCCAATCACCATTCACTTTAAAACGAACATGACACATTCTCTGTTTCTCTTTCAATTTCTTGTTTTCATATTTCACGTTTTGTTCACTTTCATTCCAGCGCTTTCACTCTCCTCCGACGGCCTCGCGCTTCTCGCTCTGAAGTCCGCCATCGACCAGCCTTCCTCCGCTTTCTCCGACTGGAACGACGGCGACGTCACGCCCTGCGCCTGGTCGGGAATCGTTTGTGCCAACATATCTGGCGAGGAGGACCCCCGTGTGGTCGGAATCTCCCTCGCCGGGAAATCCATCTCCGGTTACCTCCCGTCAGAGCTTGGTACTCTGCGCTTCCTCCGCCGACTCAACCTCCACGACAACGCCTTCTCCGGCGTCCTACCGGCGCAGCTCTCCAACGCTACCGCACTCCACAGCCTCTTCCTCCACCGTAACAACCTTTCCGGCCCCATCCCCCACTCTCTCTGTAGCCTCCCGCGCCTTCAAAATATCGACCTCTCCGAAAATGCATTCTCCGGTCATATTCCCGACCTCCTCGGAAACTGCAAGAATCTCCAGCGCCTTATCGTCGCCGGCAACAGGTTTTCGGGTCCCACGGCGTTCCTTGGAAATCCTAACCTATGCGGGTTTCCTCTTAGAAAATCATGTTCCGGTTCGGACCGGGATTTTTCTCCCGGTTCGGATCAAAACAAACCGGTCCACCGGTCAAAGGGGTTAAGCCCCGGTTTAATTATTTTAATCTCCGCGGCTGATGCTGCTGTTGTGGCCTTCATTGGGCTTGTGATTGTTTATGTCTATTGGAAGAAAAAGGATGATGAGAATGCGTGTAGTTGCATTAGGAGAAGAAAGTTCGGCGAAGAGAAAGGGAACGTGTGTTTCTGTGGTGGATTCCCATGTGTTAGTGGGGAGAAAAGTGATGATGATGATGATGAAGATTATGAGGTGGAGGCGGCTGAGGGTGAGGGTGAAGGGGAATTGGTGAGGATTGATAAGGGATTGAGTTTCGAACTTGATGAGCTGTTGAGGGCTTCTGCTTACGTGTTGGGGAAGAGTGGGTTGGGAATTGTGTATAAGGTGGTGTTGGGGAATGGGGTTCCTGTGGCTGTGAGGAGGCTGGGGGAGGGAGGGGAACAGAGGTACAAGGAGTTTGCTGCAGAGGTTATGGCCATTGGGAAGGTCAAGCACCCTAATGTTGTAAGGTTGAGGGCTTACTATTGGGCACATGATGAAAAGCTTCTCATCAGTGATTTCATCTCCAATGGCAATCTCACACATGCCCTTAGAGGGAGAAATGGCCAACCATCTACAAATCTTTCATGGTCCACCAGGCTGAAAATCGCAAAAGGAACAGCGAGGGGCTTGGCCTATCTCCACGAATGCAGCCCAAGAAAGTTCGTCCATGGTGACATTAAACCCTCCAACATCCTACTTGACAACGAATTCCAACCCTACATTTCTGATTTCGGCCTGAACCGTCTGATCAGCATTACCGGCAACAACCCCTCCACCGGCGGATTCATGGGTGGAGCTCTTCCTTACATGAAGTCTTCACAGAAAGAGAGAACCGACAATTACAAAGCCCCCGAGGCTCGTGTCCCTGGGTGCAGACCCACCCAGAAATGGGACGTGTACTCATTTGGGGTTGTGTTGCTTGAAATACTAACTGGGAGGTCACCAGAATCATCTCCCACCACATCAACTTCCATGGAAGTCCCTGACTTGGTAAGGTGGGTGAGGAAAGGGTTCGATCAAGAAAGCCCGTTATCTGAGATGGTTGATCCATCGCTGCTCCAAGAAGTGCGTGTTAAGAAAGAGGTGCTGGCTGTGTTTCACGTAGCTTTGGCTTGCACTGAAGGAGACCCTGAGGCTCGGCCAAGGATGAAAACTGTCTCTGAAAATCTTGATAAGATTGGAACGTAA


Promoter Sequence:
>Vu_35877::LG11:6907862-6909862(+)
TTTCAATTTAAACGTTATACATATATTTCATTGTGAAACCCTTAACAAATGCCATTTTCAAAATCCATTGTGGGGCATTTTTAACGGTATAGTTTCCTCCACCTTTTTTTTCAAATTCGCTGACTAATATAAAGTTTCTCAAGTTGTTAGAGAGTAATTGAAAAAGTAATGAGTTGCTCGATTAAGCAGTTTCCTACCTGTTCTTTCATACATTACCGAGGGCCTTTTAGAGTAAATTATGAGATGCATTTGAAAAACTTTAATGTTCTCTTTGTATTTGAAAAGGGAAACAAAAGAAATATAGATAAAGAAGAAATAAGGTGTGAAAAGAAAAAATACGTTAAGAAATAAAAATGAATTGCAGCTATCTCGTAAAGAGAAATAACTTATGCATAACAAATAAAAAATATTTATTTTAATATTATGAAATTTGATCATAATGAGGAAGAGATTAACCATTAGGACCAAATAATTTAATTAATTCATATTTATGAATAGTTACAACTTATTGTTATTGATTTTTATTTGAATTTTTTAAAATTTACATGCCGAAACTAAAATAGAAAACAATAACAATATTCTTTTAAATTTTTTCTCACATATTTATATTTATCAAGTTAATTTTTTAAAATATTGATTTTATTTAAACTTGTAATTCACAAATACAAGATACTTGGATTTGTTTTGTTTTTAGAAAAATAATTTTCTTCAGCTTAATATTTTATATTGTAATTTTAGTTGGAATTTATCTTTATTTTATTTGAGTTTATATTTTAAAAAGTATTTTTAAATTTTTTCTATTTAAAATTTATAAAAGAATGTCTATTATTGTAATTTACTTGCTCAAAGAGTAAAAGACTCAACAAGAAAGATAGTAGTGCTTGTACTCGTTTTGACACGTTATCATATTTAATTGAAAGATGGGTAAAACTAAACGAAAAGTAATATTAATAACATTCTTTTTAAAATTATTTCTTCATTTTTCTTTTCTATTAAACAAACTACATCAATTTCGTAAACCGTCTCCCCTAAACCAACAAGACATAATTTGCTGAGTTATGACTTTTATGGTTGGTTAAATAGTAAAATAATATGATCATATAAAAAAATATAGTAACTATGACGTAAAAAAAATAACAGAATTAAATATATATTTTTTGGTTTCTAAACTATTAAAGAAAGATAATAATACATTAACATTCAATTTTTTTTATTTTACATCTATTTAACACTAATAAAATTATATTTTTAATTTTAAATATAAAATAGTTTTGGAAAAATTATATAGAAAAATAAATATATTAGGTTTTTTAAGACGTTGGATAGATGTAAAAAAAATTAAATAGTGCTCATATAGCATTTTCTTTACAAAAATAATTATTTCATTCACAATCTAAATTATAAACTTTTGAATCTTTACATGAAAGTTATATACAAGGTGTTTTATCCGTAATAAATGAAGTTTTACATTGAATTATAATATAAATTTTCATATATAATTTATTTTAAAAAATATTTTACATGATTTTTATGAAATTGAAAAGAAAATATTTGATAATTTAATTTAAAAATCAAATAGAATTTCTTATAATAACTTTAAGATAAAAAATATATTTAATTAAAATAAAAGTGTAATGTGAGTTGCTCCCTTTATCCATCATTATACGGTGAGTGAAGAACTTGAAGAACTAATAAGACAAAGTGAACTGCGATTTGAAGATACATTTGCATGCGTGAAACCAATCGAAGAACAAGAAAAACAAACATTCTCTTCTTTCTCTGTCTTGTTTTTCTTACATTACACTTCACTCTTTGTCTCTTCCACCCTTCGGTTAGCAAGTCTCACACTAAGTTTTTGGCGGGAGATAGACCCCACCAAATTAAAAACAAAGCCTTCTTCTCATAAATGCAACAACCCCTCTTTCCCCTTCTCTCATAAACAACCTTCATATAACATAACAACCATTTCACACACTCATCTCTCTCTCAACTTCACAACA


Gene Sequence:
>Vu_35877(+)
ATGCCATCTTCGTCGGTTCTTACATTCCTCTTCCAAAACGGCTGCGTTCCAATCACCATTCACTTTAAAACGAACATGACACATTCTCTGTTTCTCTTTCAATTTCTTGTTTTCATATTTCACGTTTTGTTCACTTTCATTCCAGCGCTTTCACTCTCCTCCGACGGCCTCGCGCTTCTCGCTCTGAAGTCCGCCATCGACCAGCCTTCCTCCGCTTTCTCCGACTGGAACGACGGCGACGTCACGCCCTGCGCCTGGTCGGGAATCGTTTGTGCCAACATATCTGGCGAGGAGGACCCCCGTGTGGTCGGAATCTCCCTCGCCGGGAAATCCATCTCCGGTTACCTCCCGTCAGAGCTTGGTACTCTGCGCTTCCTCCGCCGACTCAACCTCCACGACAACGCCTTCTCCGGCGTCCTACCGGCGCAGCTCTCCAACGCTACCGCACTCCACAGCCTCTTCCTCCACCGTAACAACCTTTCCGGCCCCATCCCCCACTCTCTCTGTAGCCTCCCGCGCCTTCAAAATATCGACCTCTCCGAAAATGCATTCTCCGGTCATATTCCCGACCTCCTCGGAAACTGCAAGAATCTCCAGCGCCTTATCGTCGCCGGCAACAGGTTTTCGGGTGAGATTCCCGCCGGCGTGTGGCCGGAACTTCAGAACCTCCTCCAACTCGACCTCTCCGCGAATGAGTTAACCGGTTCAATCCCTGACGAAATTGGAACCCTAGTTTCCCTCTCTGGCACGCTGAATCTCTCCTTCAACCACCTATCCGGTAAGATTCCGGCGTCGCTGGGAAAATTACCGGCGACGGTGAGCTTCGATTTCAGAAACAACAACCTCAGCGGAGAAATTCCCCAAACGGGGTCGTTTTCAAACCAAGGTCCCACGGCGTTCCTTGGAAATCCTAACCTATGCGGGTTTCCTCTTAGAAAATCATGTTCCGGTTCGGACCGGGATTTTTCTCCCGGTTCGGATCAAAACAAACCGGTCCACCGGTCAAAGGGGTTAAGCCCCGGTTTAATTATTTTAATCTCCGCGGCTGATGCTGCTGTTGTGGCCTTCATTGGGCTTGTGATTGTTTATGTCTATTGGAAGAAAAAGGATGATGAGAATGCGTGTAGTTGCATTAGGAGAAGAAAGTTCGGCGAAGAGAAAGGGAACGTGTGTTTCTGTGGTGGATTCCCATGTGTTAGTGGGGAGAAAAGTGATGATGATGATGATGAAGATTATGAGGTGGAGGCGGCTGAGGGTGAGGGTGAAGGGGAATTGGTGAGGATTGATAAGGGATTGAGTTTCGAACTTGATGAGCTGTTGAGGGCTTCTGCTTACGTGTTGGGGAAGAGTGGGTTGGGAATTGTGTATAAGGTGGTGTTGGGGAATGGGGTTCCTGTGGCTGTGAGGAGGCTGGGGGAGGGAGGGGAACAGAGGTACAAGGAGTTTGCTGCAGAGGTTATGGCCATTGGGAAGGTCAAGCACCCTAATGTTGTAAGGTTGAGGGCTTACTATTGGGCACATGATGAAAAGCTTCTCATCAGTGATTTCATCTCCAATGGCAATCTCACACATGCCCTTAGAGGTTAGTTCTCTTGCTTTGTTTCACTTAGGGGTTCGTTCTTTTGGTTTGTTTCACTTTTTCTGTTAGTTTGTTTTGGGTTGTTGTATTGATGCATTGAGTTGATGTTTTGGGTTATTCTCTTCATGCTTTGAATGGAAGTGATCTGAATCGGAGTGATATTGACAGAGAACAGTGACAAGGTTTAAAGAGACAAAACATGAATTAATGGTTGGTGGTATTTTTGAACTTGATGCATGACATCTATGGGTTAAAAATGACTAATCATGAGTGAATGAATAATAGATTAATAGTATAATAACGGAACCATCACATACACATATAGTAGTTTTGTACTTTATTGTCCATGTGACTTGTAAATTAGTCTTAATTTCTTTGCTTAAAGGGAAAGTTGATTTAGTTGTTTGGTTTAAGCTGCTGCTCGTGCTGGGACTTATGAAGTAGGACTTGAGTTCTGTGCAACTTTTTTTTTTTTAAATCGCTGACATTTATATCTAGAATATACTCTACAGTCTTATTTTTCAAAAAATATATACCGTTATATTATGATTCGTGAAATGAATTTGTCTAACTCATGACAACTTCTGCATTTCATGAGATAGTAGGTATTAGTAATTTTTTATTGTGCAATATGAGTAATATCTTAAAAAAAATTGGTAGCAATGAAGATATATAGTTTTCTTAAAGAAATCTTCTACAAGGAAAAAAAATGGATTTTCACGATACTGGCTATGTAAATATTTGTGTTTGTTCCGAATGTGATTCGAATTATAACCAAAAGAATGAGTTGAAGGCTCTTGTCTTTCTGAGGTTTAATCACTAACAAAACAAAACTTGTTTATCAAAGTTGAAGTTTCACTCTTCCACTAAACTTCCCTTCTCATCTGCAATGTTGTTTGCCTTTAAAATCTTTCTTTCCTATGATTTTTGAGTACATGGATTGGATCTCCTTTTGTTCCTTTTAAATATCTTAGTTTGTAAGCCGAAACGAAGGGGGCACTCACGTTTGTGCCTTTCATTTGAGAAAAAGTTGAACTTCGTTGTGAAAATGGGTGCTTTTTGTTTCATGATTGTTTGATTTATCTTTTAGGTTAAACATTCTCCATTATGAAGAAGAGTCTTTTGTATCTTCTTCGTAAGGGTCCCACTAGAATTAGTTTCTTATTTTTTCCTTGCTTCCACCGCACCTCTGTCTCAGGCGCAGTATCATTAAAAGAAAGATACTAGGATTACATTCTGTAATACACTCATCAAACAATTCTTTATAGTTGGCTTAAATTAATATCACAAAACTGTGTTCCACTTCTTATTTAAGTTAGATTCGTCATCATTGTGTAGTATATTCCAGTAAATTTTAATCAATAAAATGTGTTACTCAGTGTAGGAAAGTGTCCTATTAAATCCAACATAAATTTATAAGTTATAATTTCAAGAAAAGTGCTATATCATCATCTGCATTTGCATTCTGTACTAAATGTTAGAAATTATTTCTGTAATGCTTTACATTTCATTCAATTTGACTGTAATGCAGGGAGAAATGGCCAACCATCTACAAATCTTTCATGGTCCACCAGGCTGAAAATCGCAAAAGGAACAGCGAGGGGCTTGGCCTATCTCCACGAATGCAGCCCAAGAAAGTTCGTCCATGGTGACATTAAACCCTCCAACATCCTACTTGACAACGAATTCCAACCCTACATTTCTGATTTCGGCCTGAACCGTCTGATCAGCATTACCGGCAACAACCCCTCCACCGGCGGATTCATGGGTGGAGCTCTTCCTTACATGAAGTCTTCACAGAAAGAGAGAACCGACAATTACAAAGCCCCCGAGGCTCGTGTCCCTGGGTGCAGACCCACCCAGAAATGGGACGTGTACTCATTTGGGGTTGTGTTGCTTGAAATACTAACTGGGAGGTCACCAGAATCATCTCCCACCACATCAACTTCCATGGAAGTCCCTGACTTGGTAAGGTGGGTGAGGAAAGGGTTCGATCAAGAAAGCCCGTTATCTGAGATGGTTGATCCATCGCTGCTCCAAGAAGTGCGTGTTAAGAAAGAGGTGCTGGCTGTGTTTCACGTAGCTTTGGCTTGCACTGAAGGAGACCCTGAGGCTCGGCCAAGGATGAAAACTGTCTCTGAAAATCTTGATAAGATTGGAACGTAA