Genomic Resources - Ricebean Portal

Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

Gene Details:

Gene ID	Chr. No.	Start Position	End Position	Function	View on
Vu_35826	LG11	5926985	5927479	hypothetical protein LR48	Map

Annotations

category		relationship type		keyword

SNP	Position	Effect	Amino acid change
G/T	5927175	missense_variant	p.Gly64Val
C/T	5927190	missense_variant	p.Thr69Ile
G/A	5927429	missense_variant	p.Gly149Ser
A/G	5927434	synonymous_variant	p.Glu150Glu
C/A	5927443	synonymous_variant	p.Thr153Thr

View accession wise SNPs

Sequence Details:

Protein Sequence:
>Vu_35826.1

MDYTHPASSDAGSSSKTNRSKEKKGAKKCKGVRLSTDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIQYVKYLKTQIWLHQTMINFLDDNDSLSPMYLTDFYFPSDPSEQFIFPQQNPPLDHNMHNFPHLPPPQCSFHGEDTTYFDASFKYWPA*

CDS Sequence:
>Vu_35826.1

ATGGATTACACTCACCCTGCTTCATCTGATGCAGGATCCTCTTCAAAGACAAACAGAAGCAAGGAGAAAAAGGGTGCTAAGAAATGCAAAGGAGTGAGGCTCTCCACCGATCCTCAGAGCGTGGCAGCAAGAGAACGAAGGCACAGAATCAGTGACAGGTTCAAGATCTTGCAGAGCATGGTCCCTGGTGGAAGCAAGATGGACACAGTGTCCATGTTGGAGGAAGCCATTCAGTATGTGAAGTACCTCAAAACTCAGATTTGGCTCCACCAAACCATGATCAATTTCTTAGATGATAACGACTCACTCTCCCCTATGTACCTTACTGATTTCTACTTCCCTTCTGACCCTTCTGAACAGTTCATTTTCCCTCAGCAAAATCCACCACTTGATCATAACATGCACAACTTTCCTCATCTTCCACCACCACAATGCAGCTTCCATGGTGAAGACACCACCTACTTCGATGCCTCTTTCAAATATTGGCCAGCTTAA

Promoter Sequence:
>Vu_35826::LG11:5924985-5926985(+)

TTCTCACAAAACGTAGAGTATTCCAAGTAGTGTTAAAAGGGAGATAAATAAAAAGAAGCAATTTAAGATGAGGTCACTTTGTTCAGATTTATGGTGCATGTTGGACCCTTTCATGATACAAAAGTGATATGAAATTTTCTTAATGAGATATAGCGAAATGTTAAATAAAACATTGCTTTTAGAAGATGCCCCAACAAAGATACAGGTGAAAAAACAGAACTTTGTTTTCTTCGGGATGTGTGGGATTTTAAAATTGAAGCTTTAAAGCTTTATTATTCAAGTGGAATACTACTTTGATTGTTTTTCTTGAAAAGATGTGCTGATTGTTGATTCCACCTTAAGCTCTTTCCCGATCTCATCATATAAACAGCATTACCCAGATGAAACAAAAAACATGAATAGTAACATGAAGGACACCCAGAAAAAACAAAACCTGTTTTTATTTCATGAGATAGTCCAATGTTAAATAATTTTACAATTAATTATATTTTTAGTCTTTAAACTTTTAATTAAAATTGCATTTCATTTCTGCCATAATCTTTATACTAATGTTATTTTCTTACTGTCGATGACATTAAATGATTTATAATATAATAAATGACCTTAATGGATTAAAATTAAATATCAGCTCCCACAACTGCGAGGACATTCGATTTTAATATATTATGCAAAAATGTTTGTCACAAACTATTCTGTTGATGACATTATACATTCATTTATAAAATGTAAGGATAAAACTAATACAAAATTCATAAGAAAGACAAAATATAGATGAAAACTGAGAGTAAAATAACATAATTAAGCCATTGTTTGATAGAGGGTTGTTCTTTTTAACTGGCTTCAACTTAAGGGTGAAAAGCACAAACCGTACACAATAAAGAGAGAAACTAATGGACTGTTTGCTCACTGGATTTGGACATGCTTCAACCATAAAACATTTTTGCTTCGATTTGAGGGGAAAGGGACTCACTTTCTCTTTGATCACCTCTGAGCTTTGAATCAAAAGATGAACAGATGGCCTATTAATTACTTGCTAAAGAGCTTTGTGATTTTGTTCTTTTTCCAGTCCTCTTGCAATGCAAGTGGGTCACGTTTTGAAGAGATATATGTACTATACCTAATCAAAGGTAACAAATCATAAAGACACGAAACTGAGGAGCAGCATATCCAAAAGAAGACTTAGTGTGAAATTAAAAAACAAAAATTCCTGGGTGGGTCAAAGCATAAATCTGATAATTATTGCTTTTGTCTAACTTATCTATAAGCCTAAAAAAACCAAACGAAATTATAATTTCCACCGAAATACAAACATTTTGACTCAATGTTTACACCTCCAATGAGACTTTTTTTCAGGAGTGTAGCCATATATTTCTAGTATATTATTTTTATTATTGATTCAAATTCACATACCTATTGATAGATAAAGTAGTATGACATAATTCAGAATTAACTATATTTTTATATATCCGCTTAGAACATTTTCTTAATTATATTTCTGTATATGAAATAATAATTTTGAGAGATATATCACACACTCTTAGATAAATTTAAATAGTTTAAGAGATTTAATCCTTATATATACTTTCCACTTGAATAGGATTAAAAGATAGCAATTAATAAAAAGGTATTAGAGTCATGTATTTAACATATTGTTTCCTATATCATTTATGTGTTTTGAATCTTCCATAGTATTAATATTTTAAGGGTTATATTATAAATTTTAGAACTTTTATTATTTAAAATTGTTGATTGATTATATCTACAAACAAGAATACTCCATGCGTTATCCATACCCAAAGCAAAAATTGGCAGACTCACACGTCCACATCTCTCCTTTTTCATTCATTCAAAAATCAAAATCAAAATCATTGAACAAACAAAGTTCATATTTCTTCTCTCTATAAAACGTGTTAAAAGTGACCTAGTTCCCTACCAAATCCAAGTCAAGTTCCACTACCTCTCACCTCACCACTGCAACAACACCCTTGTAGCAGAAGCAA

Gene Sequence:

>Vu_35826(+)