Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_35822 LG11 5833127 5836061 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/A 5833294 synonymous_variant p.Lys56Lys
A/G 5833387 synonymous_variant p.Leu87Leu
C/G 5833392 missense_variant p.Thr89Ser
C/T 5833393 synonymous_variant p.Thr89Thr
T/A 5833420 synonymous_variant p.Leu98Leu
A/G 5833424 missense_variant p.Ser100Gly
A/G 5833440 missense_variant p.His105Arg
C/G 5833441 missense_variant p.His105Gln
G/T 5833542 missense_variant p.Arg139Leu
T/C 5833604 missense_variant p.Phe160Leu
C/A,* 5833619 missense_variant p.Pro165Thr
T/A 5833621 synonymous_variant p.Pro165Pro
G/C 5833636 missense_variant p.Lys170Asn
T/G 5833639 synonymous_variant p.Leu171Leu
A/G 5833642 synonymous_variant p.Glu172Glu
A/T 5833644 missense_variant p.Asn173Ile
A/G 5833656 missense_variant p.Gln177Arg
G/A 5833668 missense_variant p.Arg181Gln
C/G 5833738 synonymous_variant p.Ser204Ser
G/T 5833760 missense_variant p.Asp212Tyr
G/C 5833772 missense_variant p.Val216Leu
G/A 5833807 synonymous_variant p.Leu227Leu
A/T 5833819 synonymous_variant p.Leu231Leu
G/C 5833821 missense_variant p.Gly232Ala
G/A 5833824 missense_variant p.Ser233Asn
T/C,A 5833825 missense_variant p.Ser233Arg
T/G 5833827 missense_variant p.Leu234Arg
A/G 5833840 synonymous_variant p.Ser238Ser
T/G 5833857 missense_variant p.Val244Gly
G/T 5833865 missense_variant p.Val247Leu
C/T 5833893 missense_variant p.Ala256Val
A/T 5833895 missense_variant p.Asn257Tyr
A/T 5833903 missense_variant p.Lys259Asn
T/C 5833904 missense_variant p.Phe260Leu
C/A,* 5833998 missense_variant p.Ser291Tyr
A/G 5834007 missense_variant p.Asn294Ser
T/G 5834026 missense_variant p.Phe300Leu
T/A 5834130 stop_gained p.Leu335*
G/A 5834131 synonymous_variant p.Leu335Leu
C/T 5834134 synonymous_variant p.Asp336Asp
A/G 5834142 missense_variant p.Tyr339Cys
C/T 5834160 missense_variant p.Ala345Val
T/G 5834163 missense_variant p.Leu346Arg
C/T 5834165 missense_variant p.Pro347Ser
C/A 5834166 missense_variant p.Pro347His
C/G 5834174 missense_variant p.Leu350Val
A/T 5834239 synonymous_variant p.Pro371Pro
C/T 5834269 synonymous_variant p.Tyr381Tyr
G/T 5834273 missense_variant p.Asp383Tyr
A/G 5834274 missense_variant p.Asp383Gly
G/A 5834356 synonymous_variant p.Leu410Leu
G/C 5834357 missense_variant p.Gly411Arg
C/G 5834365 missense_variant p.Asn413Lys
T/G 5834366 missense_variant p.Ser414Ala
A/G 5834372 missense_variant p.Ser416Gly
A/G 5834420 missense_variant p.Ile432Val
A/G 5834486 missense_variant p.Lys454Glu
A/G 5834537 missense_variant p.Ile471Val
C/A 5834559 missense_variant p.Ser478Tyr
A/G 5834561 missense_variant p.Ile479Val
C/A 5834566 synonymous_variant p.Leu480Leu
G/T 5834611 missense_variant p.Lys495Asn
A/G 5834617 synonymous_variant p.Ser497Ser
T/C 5834713 synonymous_variant p.Ile529Ile
T/C 5834786 missense_variant p.Ser554Pro
C/A 5834787 missense_variant p.Ser554Tyr
T/A 5834851 missense_variant p.Asn575Lys
G/A 5834860 synonymous_variant p.Arg578Arg
G/C 5834884 missense_variant p.Leu586Phe
T/A 5834890 missense_variant p.His588Gln
T/G 5834905 missense_variant p.Phe593Leu
C/A 5834906 missense_variant p.Gln594Lys
A/G 5834907 missense_variant p.Gln594Arg
C/T 5834914 synonymous_variant p.Phe596Phe
A/T 5834922 missense_variant p.Lys599Met
A/T 5834928 missense_variant p.Tyr601Phe
G/A 5834972 missense_variant p.Ala616Thr
G/A 5834975 missense_variant p.Val617Ile
C/T 5834979 missense_variant p.Pro618Leu
A/T 5834982 missense_variant p.Glu619Val
T/C 5835041 missense_variant p.Phe639Leu
T/G 5835050 missense_variant p.Tyr642Asp
A/G 5835110 missense_variant p.Asn662Asp
A/C 5835118 synonymous_variant p.Leu664Leu
T/G 5835128 missense_variant p.Ser668Ala
T/A 5835131 missense_variant p.Tyr669Asn
A/G 5835132 missense_variant p.Tyr669Cys
A/G 5835203 missense_variant p.Lys693Glu
C/G 5835361 intron_variant
G/C 5835425 intron_variant
A/G 5835446 intron_variant
T/C 5835475 splice_region_variant&intron_variant
G/A 5835481 splice_acceptor_variant&intron_variant
A/C 5835487 missense_variant p.Lys698Asn
T/G 5835499 missense_variant p.His702Gln
C/A 5835523 synonymous_variant p.Ala710Ala
C/A 5835541 synonymous_variant p.Gly716Gly
G/C 5835558 missense_variant p.Cys722Ser
G/A 5835572 missense_variant p.Glu727Lys
G/C 5835587 missense_variant p.Asp732His
A/G 5835594 missense_variant p.Asn734Ser
A/G 5835663 intron_variant
G/A 5835683 intron_variant
T/C 5835684 intron_variant
C/T 5835704 intron_variant
C/G 5835748 intron_variant
T/C 5835752 intron_variant
A/G 5835763 intron_variant
T/A 5835780 intron_variant
A/T 5835781 intron_variant
T/C 5835800 intron_variant
T/A 5835812 intron_variant
A/G 5835864 intron_variant
G/A,T 5835865 intron_variant
C/A 5835869 intron_variant
G/A 5835874 intron_variant
T/A 5835891 intron_variant
C/G 5835892 intron_variant
T/C 5835897 intron_variant
A/G 5835969 intron_variant
T/C 5836013 synonymous_variant p.Phe746Phe

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_35822.1
MRTELVSPLLAMPLFWLCLCNELFVVSGLCHDDQRSLLLQLKNNLTYTFESSTKVKSWNPTNDCCGWIGVSCDKEGHVTSLDLSGELITGGFGNSSSLFSLQHLHKLNLAYNDFNSVIPSAFNRLENLTYLNLSCAGFRGQIPIEISQMTRLVTLDLSSFLMFYPSNELKLENPNLQKLVRNLTSIRQLYLDGVSISAAGHEWSSALMSLHDLQEVRMSWCNLSGPLDPSLGSLENLSVIVLDVNNVSSTVPETFANLKFLTILSLSSCQLTGTFPQNIFKIVTLSIVDISLNNNLQGFFPDFPQGSLQTLRVSNTSFSGAFPNSIGNMKNLTELDFSYCLFSGALPNSLSNLTELSYLDLSYNNFTGRIPSFEMVNKLTYLDLSNNGLSGAVPSSFHFEGLNNLVSIDLGYNSISGSIPSSLFTLPQLQKIMLSHNQFGQLDEFTNVSSSKLKILDLSSNNLSGSFPTSIYQLSRLSILILSSNKLNGTMNLDKLSELRNLTTLDLSYNNLLVDVNVTNAKPSYFPSISNLKLASCNLKSFPDFLRNHSLIASLDLSDNHIQGIVPSWIWKLQNLERLNISHNLLTHLEGPFQNFSSKLYVLDLHHNKLQGPIPAVPENAVYLDFSSNNFNSVIPQDFGNYLPFTFFLSLSNNTLSGSIPNSLCNASYLQVLDLSNNNISGTIPSCLMAMNKSLGTKGTWHMLQIVDLAINNFTGKLPGNCFTRWEAMMSDENQAESKAPNFSHFQLLPFKEMMGSTVLH*


CDS Sequence:
>Vu_35822.1
ATGAGAACTGAGCTAGTCTCACCACTTTTGGCGATGCCATTGTTTTGGCTGTGCCTCTGTAACGAACTCTTTGTGGTTTCTGGCCTTTGTCATGATGATCAGAGGTCATTGCTGCTCCAGCTCAAAAACAACCTCACCTACACCTTTGAAAGCAGCACCAAAGTGAAGTCATGGAATCCAACTAATGATTGCTGCGGCTGGATAGGGGTATCTTGTGACAAGGAGGGACACGTTACTTCTCTTGACCTCAGTGGAGAATTAATCACCGGTGGTTTTGGCAATTCAAGTAGCCTTTTCAGTCTTCAACATCTCCACAAATTGAATTTGGCTTATAACGATTTCAATTCTGTCATTCCATCTGCATTTAATAGGTTGGAAAATTTAACGTACCTGAATTTATCATGTGCGGGCTTTCGGGGTCAGATTCCAATAGAGATTTCTCAAATGACAAGGTTGGTTACTCTTGATCTCTCTTCTTTTCTTATGTTTTACCCTAGCAATGAGCTGAAGCTTGAAAACCCAAATCTACAAAAGCTTGTCCGAAATCTCACCAGTATTAGGCAACTGTATTTGGATGGTGTAAGTATATCAGCTGCAGGACATGAATGGTCCAGCGCTTTGATGTCACTGCATGACCTGCAAGAAGTTCGCATGTCATGGTGCAATCTCTCAGGACCCCTGGATCCTTCCCTAGGAAGTCTTGAGAATCTATCAGTTATTGTTCTTGATGTGAACAATGTATCATCCACAGTGCCAGAAACATTTGCCAATTTGAAATTTCTGACCATCCTAAGTCTTTCTTCTTGTCAGTTGACTGGAACATTTCCTCAGAATATCTTCAAGATTGTAACATTGTCAATTGTTGACATATCTTTAAACAACAATCTCCAAGGTTTCTTTCCAGACTTCCCACAAGGTTCTCTTCAGACCTTAAGAGTAAGTAACACAAGCTTCTCTGGAGCATTTCCAAACTCTATTGGGAACATGAAGAACTTAACTGAATTGGACTTTTCATATTGTCTATTTAGCGGAGCGCTTCCCAATTCACTGTCAAACCTCACAGAACTCAGTTACCTGGACTTGTCATATAACAACTTCACAGGTCGAATTCCATCATTTGAAATGGTCAACAAGCTTACCTACTTAGACCTTTCTAATAATGGTTTGAGTGGTGCAGTTCCATCATCTTTTCACTTTGAAGGACTGAACAATCTTGTTAGCATTGATTTGGGTTATAACTCGATTAGTGGGAGCATTCCTTCATCTCTTTTTACACTCCCACAGCTGCAAAAAATTATGCTTTCCCATAATCAGTTTGGTCAACTAGACGAATTCACAAATGTGTCTTCTTCTAAATTAAAAATACTCGATTTAAGTAGCAATAATCTATCAGGGTCTTTTCCAACATCTATATACCAACTCAGTAGACTCTCTATCCTCATACTTTCTTCAAACAAGTTAAATGGGACAATGAATCTAGATAAGCTTTCAGAGCTCAGAAATTTAACCACATTAGATCTTTCATACAACAACTTATTAGTCGATGTCAATGTTACGAATGCCAAGCCGTCTTACTTTCCCAGCATTAGCAATCTAAAGTTAGCATCCTGCAACTTGAAATCTTTCCCTGATTTCTTGAGAAATCACTCCTTAATCGCCTCTCTAGATCTTTCGGATAACCATATCCAAGGAATAGTGCCCAGCTGGATTTGGAAACTACAGAATCTTGAAAGGCTTAATATTTCTCATAATTTGTTGACTCATTTGGAAGGACCTTTTCAGAATTTCTCTTCCAAGTTGTATGTCCTTGATCTTCATCATAATAAACTTCAGGGGCCAATACCTGCTGTTCCTGAAAATGCGGTCTATTTGGATTTCTCAAGCAACAATTTTAACTCTGTTATTCCACAAGACTTTGGTAATTACCTGCCTTTCACATTCTTTCTCTCTCTCTCAAACAATACTTTGAGTGGCAGTATCCCTAATTCCCTATGCAATGCTTCATATCTTCAAGTGCTTGATCTTTCCAATAATAACATTTCTGGAACAATTCCATCATGTTTAATGGCAATGAATAAGAGCCTTGGGACCAAAGGCACATGGCATATGCTTCAAATAGTGGATCTGGCCATCAACAATTTCACTGGCAAGCTACCTGGAAACTGCTTCACAAGGTGGGAGGCAATGATGTCTGATGAAAACCAAGCTGAATCCAAGGCACCCAACTTCAGTCATTTTCAGCTTCTTCCTTTCAAAGAAATGATGGGCTCTACGGTCCTCCATTGA


Promoter Sequence:
>Vu_35822::LG11:5831127-5833127(+)
ACGCAACCAGAAAACAAATCACGCCTCCTTGATTCAATCTTCTCCATCCCAACCTGCACACAGAATCACAAAAACAATTGACGTAGAAACCAAACTCAGAAATCGTAAATCCTTTTCATGGCGCCTACCTCCATTGACATGGATGAGTTATTTTCTTCCTCGCAAGCATAACCATGAGCTTCAATCGTGAATTCCTTAAGCTGTCATCCATGGGCGAGAGTTGCACGCCTTCATCCTCTCCACAACGGCGTAGGAGAAAATGTGAGAAAAGAGAGCAACGACGCAACTTCTGTCTCTGTTCACGAAATTTAACCCTAAACACATGTTATTACCTCAGTTATTTTTTTAACTAAGGCAATAAGGGTCTACGGCCTCGGTTCTATAAAGAACCGATGCCTAAACTCTCTCAAAAAAAAATTCAGCTATTTTATGCCTCGGTTCTTTAAACAACCGAGGTAATAGACATTTGCAATAATTACAAAAATGTCACTATGTTAGTTTTAGGCATCATTTCATTTTGAACCGAGGCATATACATTTGTGATAATTACATAAATGCCACCGCGCTAGTTTTAGGCATCGGTTCTTTTTGAATCGAGGCGTATACGTTTATGATAATTACAAAAATGTCACCACGTCATTTTTTGCTTCGGTCATAGCTAAACCGATGTCAAATGCGCGAAGTAAAATCCTTTTTTTACTAGTGTTTTTACTATTCTTGAATTTATCTATATGTTTTGTTTCGGAATCAAATAAAAAGTATTGATTTTACATTCTAGCTAATTAGCTAAGGTTTTTAAATCTATATATGTGTTAATCATATGAGTTAAAGTGTTTTTAAAATCAATTAAGACTTTACTTTGATTTAATTTAAAAGCTTTAAGGTGATTAGTTGAGTTTTTACCAAGAGACTTTACTTTGATTAAAGGTAATCACTTTAATTAAAATTAGTCAAAACTTTACTTTGATTGATTAAACTTTTTATTAGTGAGGAGACAAATAAATAGATATAATTAGACATAATAAAATTTAATTGAGAGTGTACCTTGGTTGAATTGACTATAAATAATCTAAAATTCTTTATTATTAATTAAGATTATACTTTAGTTAATTGATATTTTATATTGATTAATTTGTAAATATACAACCATTAATATTGAAAAAAAATACGGAATAAAGTTAAATTTATGTAATTTGTTGAATATTGTATAACATACTAAACAACTTACCATTACTTATTGTCAATGTTTAATCACATTGTCGTGCGTATAACAAACTTTTACTTGTAAGGGTCACAAATGATCTCTTATTCCAGAATATGAAAAATTATGTTGTCAAGTATTATTGTTTGTCCTATAATCATCACAAATAGAATCAACTTAATTAACTCTAACTTCAATTTATAATAAGAAATTAATAAAATTAGACCAAAACTTATTTTATTTAATTTTAAATGTTAGTTTAATCTACTTTTAACAATATAATCAACTCACATGATTTTAGTGCTTATTGCTTGTGCAACAGAAATAAGCCATGTGTAAATAATACAGGAGATAATATAATGACTTTGTGAGTGTTCTTTATTATAGATTGTCTATAGTCACTTCTATTTAATAATACCAGTTGTATGGGACATGATTAATTGCACGCTTGGTAAGTTGAGGTTCAACAACATGCAAATCTTCATCTTCAATCTTATTCAGCTTATTGAGGTTCAGGGATACCCAGTTAGAAAGAAATGTATTATATATATTTTTATTTATTTCTATCTTTCTATGAAGTGGTGTTATTTGGACACGCGAAAATTCAAAAGGCGAAACTGGGACATTCCGTCTGAGTGAGGATGGGTGGGTCCCTAATGAAAGCCAACATCGACCGTTGACCATTGACCATAGACTTTTCCATGGAAGTTGCGAGTTTTTAAACAACAGACAAGCTTTAAATAAAATTAAAACTTCTGTCTGTGGGCGTAGGTGTCATCATCTTAATTATCATCTACAA


Gene Sequence:
>Vu_35822(+)
ATGAGAACTGAGCTAGTCTCACCACTTTTGGCGATGCCATTGTTTTGGCTGTGCCTCTGTAACGAACTCTTTGTGGTTTCTGGCCTTTGTCATGATGATCAGAGGTCATTGCTGCTCCAGCTCAAAAACAACCTCACCTACACCTTTGAAAGCAGCACCAAAGTGAAGTCATGGAATCCAACTAATGATTGCTGCGGCTGGATAGGGGTATCTTGTGACAAGGAGGGACACGTTACTTCTCTTGACCTCAGTGGAGAATTAATCACCGGTGGTTTTGGCAATTCAAGTAGCCTTTTCAGTCTTCAACATCTCCACAAATTGAATTTGGCTTATAACGATTTCAATTCTGTCATTCCATCTGCATTTAATAGGTTGGAAAATTTAACGTACCTGAATTTATCATGTGCGGGCTTTCGGGGTCAGATTCCAATAGAGATTTCTCAAATGACAAGGTTGGTTACTCTTGATCTCTCTTCTTTTCTTATGTTTTACCCTAGCAATGAGCTGAAGCTTGAAAACCCAAATCTACAAAAGCTTGTCCGAAATCTCACCAGTATTAGGCAACTGTATTTGGATGGTGTAAGTATATCAGCTGCAGGACATGAATGGTCCAGCGCTTTGATGTCACTGCATGACCTGCAAGAAGTTCGCATGTCATGGTGCAATCTCTCAGGACCCCTGGATCCTTCCCTAGGAAGTCTTGAGAATCTATCAGTTATTGTTCTTGATGTGAACAATGTATCATCCACAGTGCCAGAAACATTTGCCAATTTGAAATTTCTGACCATCCTAAGTCTTTCTTCTTGTCAGTTGACTGGAACATTTCCTCAGAATATCTTCAAGATTGTAACATTGTCAATTGTTGACATATCTTTAAACAACAATCTCCAAGGTTTCTTTCCAGACTTCCCACAAGGTTCTCTTCAGACCTTAAGAGTAAGTAACACAAGCTTCTCTGGAGCATTTCCAAACTCTATTGGGAACATGAAGAACTTAACTGAATTGGACTTTTCATATTGTCTATTTAGCGGAGCGCTTCCCAATTCACTGTCAAACCTCACAGAACTCAGTTACCTGGACTTGTCATATAACAACTTCACAGGTCGAATTCCATCATTTGAAATGGTCAACAAGCTTACCTACTTAGACCTTTCTAATAATGGTTTGAGTGGTGCAGTTCCATCATCTTTTCACTTTGAAGGACTGAACAATCTTGTTAGCATTGATTTGGGTTATAACTCGATTAGTGGGAGCATTCCTTCATCTCTTTTTACACTCCCACAGCTGCAAAAAATTATGCTTTCCCATAATCAGTTTGGTCAACTAGACGAATTCACAAATGTGTCTTCTTCTAAATTAAAAATACTCGATTTAAGTAGCAATAATCTATCAGGGTCTTTTCCAACATCTATATACCAACTCAGTAGACTCTCTATCCTCATACTTTCTTCAAACAAGTTAAATGGGACAATGAATCTAGATAAGCTTTCAGAGCTCAGAAATTTAACCACATTAGATCTTTCATACAACAACTTATTAGTCGATGTCAATGTTACGAATGCCAAGCCGTCTTACTTTCCCAGCATTAGCAATCTAAAGTTAGCATCCTGCAACTTGAAATCTTTCCCTGATTTCTTGAGAAATCACTCCTTAATCGCCTCTCTAGATCTTTCGGATAACCATATCCAAGGAATAGTGCCCAGCTGGATTTGGAAACTACAGAATCTTGAAAGGCTTAATATTTCTCATAATTTGTTGACTCATTTGGAAGGACCTTTTCAGAATTTCTCTTCCAAGTTGTATGTCCTTGATCTTCATCATAATAAACTTCAGGGGCCAATACCTGCTGTTCCTGAAAATGCGGTCTATTTGGATTTCTCAAGCAACAATTTTAACTCTGTTATTCCACAAGACTTTGGTAATTACCTGCCTTTCACATTCTTTCTCTCTCTCTCAAACAATACTTTGAGTGGCAGTATCCCTAATTCCCTATGCAATGCTTCATATCTTCAAGTGCTTGATCTTTCCAATAATAACATTTCTGGAACAATTCCATCATGTTTAATGGCAATGAATAAGAGCCTTGGGGTATTAAATCTGAGAAAGAACAAACTCACGGGCCCTGTCCCAGATACCTTTTCAGATGCTTGTTCTCTAAGGACTCTGGATCTCCATAACAACAAATTAGATGGAAAGATTCCAAAATCTCTTTCAAATTGTACTTCATTAGAAGTCTTGGACCTTGGAAACAACAAGATTATGGATGGCTTTCCGTGTTTGTTGAAGAACATATCCACAGTCCGGGTCTTAGTCTTACGAAAAAATAATTTGCATGGTCATATTGGATGTCCAAAGACCAAAGGCACATGGCATATGCTTCAAATAGTGGATCTGGCCATCAACAATTTCACTGGCAAGCTACCTGGAAACTGCTTCACAAGGTGGGAGGCAATGATGTCTGATGAAAACCAAGCTGAATCCAAGGTAAAACATATCCAATACCAGTTTCTTCAATATGGTAACCAAATATATTATCATGATTCAGTGACAGTTACAGTAAAAGGTCAACGGATGGATCTGATTAAGATTCTAACTGTCTTCACTTCGATCGACTTCTCATCCAACTATTTTGAAGGAGAAATACCAAATGAGTTATTTGAGTTTAAGGCACTCTATACGCTTAACTTGTCAAATAATGCTTTTTCTGGCAAAATTCCACAATCAATTAGAAATCTGAAGGAGCTTGAGTCCTTAGACTTATCAATCAACTTACTGGAAGGAAATATTCCCACAGAACTTGCAACTTTATCCTTCCTATCAGTCCTGGACCTCTCCTTTAATCATTTGGTGGGAAAGATCCCAACAGGCACCCAACTTCAGTCATTTTCAGCTTCTTCCTTTCAAAGAAATGATGGGCTCTACGGTCCTCCATTGA