Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_35821 LG11 5821969 5825131 "PREDICTED: leucine-rich repeat receptor protein kinase EMS1-like, partial "
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/G 5821976 missense_variant p.Thr3Arg
G/A 5822043 synonymous_variant p.Leu25Leu
G/A 5822212 missense_variant p.Asp82Asn
C/T 5822449 missense_variant p.Leu161Phe
A/G 5822464 missense_variant p.Ser166Gly
G/C 5822478 missense_variant p.Lys170Asn
T/G 5822481 synonymous_variant p.Leu171Leu
A/G 5822484 synonymous_variant p.Glu172Glu
A/T 5822486 missense_variant p.Asn173Ile
A/G 5822498 missense_variant p.Gln177Arg
G/A 5822510 missense_variant p.Arg181Gln
G/A 5822618 missense_variant p.Gly187Arg
A/C 5822643 missense_variant p.Gln195Pro
T/G 5822668 missense_variant p.Phe203Leu
A/G 5822754 stop_lost p.Ter232Trpext*?
C/T 5822838 missense_variant p.Pro260Leu
A/C 5822840 synonymous_variant p.Arg261Arg
T/G 5822950 intron_variant
C/T 5823024 missense_variant p.Thr294Ile
A/C 5823269 intron_variant
A/C 5823290 intron_variant
C/G 5823294 intron_variant
A/C 5823308 intron_variant
A/T,* 5823311 intron_variant
G/A,T 5823312 intron_variant
A/G 5823345 intron_variant
T/A 5823346 intron_variant
C/A 5823356 intron_variant
G/C 5823361 intron_variant
A/C 5823367 intron_variant
G/A 5823369 intron_variant
A/C 5823374 intron_variant
A/G 5823415 intron_variant
G/A 5823425 intron_variant
T/G 5823433 intron_variant
G/C,* 5823445 intron_variant
A/C 5823458 intron_variant
C/T 5823467 intron_variant
C/T 5823472 intron_variant
G/T 5823474 intron_variant
A/G 5823489 intron_variant
A/T 5823503 intron_variant
T/A 5823525 intron_variant
C/G 5823620 intron_variant
A/G 5823703 intron_variant
T/G 5823713 intron_variant
C/A 5823714 intron_variant
T/C 5823719 intron_variant
T/C 5823725 intron_variant
G/A 5823729 intron_variant
C/T 5823746 intron_variant
G/C 5823770 intron_variant
C/A 5823790 intron_variant
G/A 5823793 intron_variant
A/G 5823794 intron_variant
T/A 5823799 intron_variant
G/C 5823800 intron_variant
T/A 5823805 intron_variant
C/T 5823810 intron_variant
G/T 5823844 intron_variant
C/T 5823851 intron_variant
T/A 5823857 intron_variant
C/T 5823868 intron_variant
T/A 5823904 intron_variant
G/C 5823905 intron_variant
G/A 5823938 intron_variant
C/G 5824058 intron_variant
A/T 5824197 intron_variant
C/G 5824201 intron_variant
C/G 5824307 intron_variant
C/T 5824495 intron_variant
A/G 5824498 intron_variant
T/A 5824661 intron_variant
A/C 5824664 intron_variant
G/A 5824669 intron_variant
T/G 5824672 intron_variant
G/A 5824673 intron_variant
G/A 5824678 intron_variant
C/G 5824696 intron_variant
A/G 5824773 synonymous_variant p.Ser348Ser
A/G 5824786 missense_variant p.Asn353Asp
C/T 5824907 missense_variant p.Thr393Ile
G/C 5824931 stop_lost p.Ter401Serext*?
T/C 5825012 missense_variant p.Met428Thr
A/G 5825032 missense_variant p.Ser435Gly
T/A 5825120 missense_variant p.Val464Glu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_35821.1
MRTELVSALLAMPLFWLCLCNNLFLVSGLCPHDQRSFLLQLKNNLTFTIETSSKLKSWNPSNDCCGWIGVKCDKEGHVTALDLSGESITGSFGNSSSLFSLQHLHKLNLAYNYFNSVIPSAFKRLGNLTYLNLSCAGFLGQIPIEISQMTRLVTLDLSSSLMFYTSNELKLENPNLQKLVRNLTRPLDPSLARRDNLSIIVLDLNDLSSAVPETFANFKMLTILSLSSCQLTRTFPQKIFNIGTLSVVDLSFNINLRGLFPDFPPGSLHTLRVGNTSFSGAVPHSIELSYLDLSLNNFTGRIPSFNMAKKLTLLDLSYNGLSGSIPSSHFEGLNNLVTIDLILDLSFNHLVGKIPTGTQLQSFPASSFEGNDGLYGPPLTEEQDGTEPGVLQEHQTTVSTIDWNFISVEVGLIFGHGMIFGPLLFWKQWRIWYWKVINKILCWIFPRLYFEYATKRGQTYATLRWQH*


CDS Sequence:
>Vu_35821.1
ATGAGAACAGAGCTAGTCTCAGCACTTCTGGCCATGCCATTGTTTTGGCTGTGCCTCTGTAACAACCTTTTTCTGGTTTCTGGCCTTTGTCCTCATGATCAGAGGTCATTTCTGCTCCAACTCAAGAACAATCTGACTTTCACCATTGAAACAAGCAGCAAACTCAAGTCATGGAATCCAAGTAATGATTGTTGCGGTTGGATAGGGGTAAAGTGTGACAAGGAGGGACATGTTACTGCTCTTGACCTCAGTGGTGAATCAATCACTGGTAGTTTTGGCAATTCAAGTAGCCTTTTCAGTCTTCAACATCTCCACAAATTGAATTTGGCTTACAACTATTTCAATTCTGTCATTCCATCTGCATTTAAGAGGTTGGGAAATTTGACTTATCTGAATTTATCATGTGCGGGCTTTCTGGGTCAGATTCCAATAGAGATTTCTCAAATGACAAGGTTGGTTACTCTTGATCTCTCTTCTTCTCTTATGTTTTACACTAGCAATGAGCTGAAGCTTGAAAACCCAAATCTACAAAAGCTTGTCCGAAATCTCACCAGACCCCTGGATCCTTCCCTTGCAAGACGTGACAATCTATCGATCATAGTTCTTGATTTGAACGATTTATCATCCGCAGTGCCAGAAACATTTGCCAATTTCAAAATGCTGACCATCCTAAGTCTTTCTTCTTGTCAGTTGACTAGAACATTTCCACAGAAGATATTCAACATCGGAACATTGTCAGTTGTAGACCTATCCTTCAACATCAATCTCCGAGGTTTGTTCCCAGACTTTCCACCAGGATCTCTTCACACCTTAAGAGTGGGTAACACAAGCTTCTCTGGAGCAGTTCCACACTCTATTGAACTCAGTTACCTGGACTTGTCACTTAACAACTTCACAGGTAGAATTCCATCATTTAATATGGCCAAGAAACTTACGCTCTTAGACCTTTCTTATAATGGTTTGAGTGGTTCAATTCCATCGTCTCACTTTGAAGGACTGAACAATCTTGTTACCATTGATCTCATCCTGGACCTCTCCTTTAATCATTTGGTGGGAAAAATCCCAACAGGCACCCAACTTCAGTCATTTCCAGCTTCTTCCTTTGAAGGAAATGATGGGCTCTACGGTCCTCCATTGACAGAAGAACAAGATGGTACAGAGCCAGGGGTGTTACAAGAACACCAAACAACAGTTTCTACCATTGACTGGAATTTTATCAGTGTGGAAGTGGGACTGATATTTGGCCATGGTATGATTTTTGGTCCACTCTTGTTTTGGAAGCAATGGAGAATATGGTATTGGAAAGTTATTAACAAAATTCTCTGTTGGATCTTCCCTCGACTGTATTTTGAATATGCAACCAAGAGAGGTCAAACCTATGCAACTCTAAGGTGGCAGCATTAA


Promoter Sequence:
>Vu_35821::LG11:5819969-5821969(+)
CAAAGAATTTCATAAAGAAGCAGCAAAGCAACAATGTAAAAAAAATGAGGAACTAATTCAAAGCTAGCACCTCCACTCTTACATAAGAAGAGAAATGACTTTGGTATTTGTTATAGATACTATACAACTATATTACACATATAATTTGAATACATTGAATAAGAGATATATATGTAATTGGATTATAATATAATTTATAATATACAATTATTTAATTGTAACTATTACGTTGTTATTGGTAGGTTAATGTATTAAAATAAATAAATAATAAAATGTGTATTTATTTACCTTAGTAATTATTTCAACCATAAACGCCCATTTCTAAACACTAAAATATTATGAGATCTATTTAATTAGAAGTATCCAGGTACCACTACCTAGAGTTAACCATTTCAATTATTATTATTATTATTTTTATTTATTATTATGACACTTGAAAGCTATACTATTTGGTCATCATCTCCTAGATTACAATTATAAGTGAGTTTCAACAAGTTCATGAGCCAAAAACAGAACACGAGCCAATCAATGGAATCAATATACATAAAGTATTTCAAATAAAGTATTATAAAGTATTCATGGATTAGCTCCCCTACCTCATTTTCCAGGAAAGAAAACGTTAACTCTTGGTGTTCTAAATTCCAAGCCTCTCTCTTGCTTGCTAACACTTTCATACAGGTTCACAAAACTTCTAAAGTACACCCACATCTCCTATCTTAACCTTACATTCTCATCTTCCTGCTATGAGAAGTTTCACTCTATTGACAAAGATCCTCCAGTACACTACATCAAATAAGGTTAAACAATATCTCAATAAGAGTAATAAAACAACAAAGTCCCTAAATGGTAAAAAAAAATTTAAAACAACTCAAACCCACCAAACAACAACAAACGATTGCCTAAAGGAACGGTCCAACGGCGGCGGAAAGAAAGGCAACGCTTTCGGTGGCAGTTGCTTTCAAACAGCGGAATGTGCTCCGGTGAACGACGCCGGTTCGCGAAACAGACAATACTTTTGTCAACGGCGGCACTCCTGCGAAGCTTTTGGGGAGAGGCACTAAAAGGGGTGGGTGGGAGAGAAGTCCTTCTCTCTAGGGTTCTTTCCCTAAGATTGTTTCAGAATCCAATTTTGAAATGACAAAATAAAACCCGCCACTTGAAACTCTATTCCCATTTTCCTTTTCACGTCATTTTCTTTTTTCTAAGATTGTTAAAATATCATTTCCCTTTTTTTAATGACAGTATAAACTACGATTATATATAAACATCATAGCCTATTTGAAAATAGCTATAGACTACTGTTATATGATAGAACCGATCCTATTTCCAACCGTAGTTTATAACTCTCTTTTTTTAATGTTTGGATATACTCAATTCTTAAACCACAACTTAACATGAAAAAAAAATCATGTTTTTTTCACAAGTGCTAATTGATGCCTTAAGAGATAAAATAATCAATTAAAAATAAAAGAGACAAAGCAATAAAAAAAATAACAAATTACATATAAGAGAGAAATCATTTTCAGTCTTGACTACAACCACGCTCAATTTAAAAAATAAAAACTGGATACTTAAGCAAGACTTATTTAAGAAAAAAATAGATAAAGTATTTAGAACAGTACAAAAAGGTCGGAGTAAGAAATTAATGCATTAAAAATGTGGGTCCCAAATGGAAGTCAATGTTGACGAAAGACGTCCATGGAAGTTGCGAGATTTTAATACAAAAGCTAATATGACACATTTTTACCTTCATTTTATATATAATATAAAAATAAAATATCATAAAATATAAAGTTTTATATTTAAAAAAAAAAGAAAAAAAAGTGAATAAGGGTAGTATAAAAAGTGAATGTAAAAAATGTATTCGTGTAAAAGAATATTTTTCTTTAACGTAACAAACAAGCTTTTGGAAGAGGGAACAACTTTTTTTTATTTCAGTTTTCAACAATTGAAACTTCTACATACGGTCGTAGTGCCATTATCAGAATTACCATCTACAA


Gene Sequence:
>Vu_35821(+)
ATGAGAACAGAGCTAGTCTCAGCACTTCTGGCCATGCCATTGTTTTGGCTGTGCCTCTGTAACAACCTTTTTCTGGTTTCTGGCCTTTGTCCTCATGATCAGAGGTCATTTCTGCTCCAACTCAAGAACAATCTGACTTTCACCATTGAAACAAGCAGCAAACTCAAGTCATGGAATCCAAGTAATGATTGTTGCGGTTGGATAGGGGTAAAGTGTGACAAGGAGGGACATGTTACTGCTCTTGACCTCAGTGGTGAATCAATCACTGGTAGTTTTGGCAATTCAAGTAGCCTTTTCAGTCTTCAACATCTCCACAAATTGAATTTGGCTTACAACTATTTCAATTCTGTCATTCCATCTGCATTTAAGAGGTTGGGAAATTTGACTTATCTGAATTTATCATGTGCGGGCTTTCTGGGTCAGATTCCAATAGAGATTTCTCAAATGACAAGGTTGGTTACTCTTGATCTCTCTTCTTCTCTTATGTTTTACACTAGCAATGAGCTGAAGCTTGAAAACCCAAATCTACAAAAGCTTGTCCGAAATCTCACCAGTATTAGGCAACTGTATTTGGATGGTCGAGCGCTTTGATGTCACTGCATGACCTGCAAGAAGTTCGCATGTCATGGTGCAATCTCTCAGGACCCCTGGATCCTTCCCTTGCAAGACGTGACAATCTATCGATCATAGTTCTTGATTTGAACGATTTATCATCCGCAGTGCCAGAAACATTTGCCAATTTCAAAATGCTGACCATCCTAAGTCTTTCTTCTTGTCAGTTGACTAGAACATTTCCACAGAAGATATTCAACATCGGAACATTGTCAGTTGTAGACCTATCCTTCAACATCAATCTCCGAGGTTTGTTCCCAGACTTTCCACCAGGATCTCTTCACACCTTAAGAGTGGGTAACACAAGCTTCTCTGGAGCAGTTCCACACTCTATTGGTAACATGAGGAACTTAACTGAATTAAATTTTGTTTCTTGTCTATTTAACGGAACGCTTCCTAATTCACTGTCAAACCTCACAGAACTCAGTTACCTGGACTTGTCACTTAACAACTTCACAGGTAGAATTCCATCATTTAATATGGCCAAGAAACTTACGCTCTTAGACCTTTCTTATAATGGTTTGAGTGGTTCAATTCCATCGTCTCACTTTGAAGGACTGAACAATCTTGTTACCATTGATCTCAGTAATAACTCGATTAGTGGGAGCATTCCTTCATCCCTTTTTACACTCCCCCACCTGAAAAGTATTATATTTTCCCATAATCAGTTTGCTCAACTAGACGAATTAACAAATGTTTCTTTTTCTAAATTACACATCCTCCATTTAAGAGGCAATAATCTATCAGGGTCTTTTCCAACATCTATATACCAACTCAGTAGACTCTATGTCCTAATACTTTCTTCAAACAAGTTAAATGGGACAATGAATCTAGATAAGCTTTCGGAGCTCATAAATTTGACTAGATTAGATCTTTCATACAACAACTTATCAGTCGATGTGAATGTTACAAATGCTGAGCCATCTTACTTTCCCAGCATTCGCTTTCTAAAGTTGGCATCCTGCAACTTGAAAACTTTCCCTGGTTTCTTGAGAAATCACTCCACAATATTCTCTCTAGATCTTTCGGATAACCATATCCAAGGAATAGTGCCCAGCTGGATTTGGAAACTACAGAATCTTGAAAGGCTTAATATTTCTCATAATTTGTTGACTCATTTGGAAGGACCTTTTCAGAATTTTTCTTCCGATTTCCAAGAGCTTGACCTTCATCATAATAAACTTCAGGGGCCAATACCATTTTTTCCTGCAAGAGGATTGTATTTGGATCTTTCAGACAACAAATTTAACTCTGTTATCCCACGAGACATCGGTAATTACCTGTCTTCCAATTTTTTTTCTCTCTCTCAAACAATACTTTGAGTGGCACTATACCTAGTTCCCTCTGCAATTCTTCAGATCTTCAATTTCTTGATCTTTCCAATAACAACATTTCTGGAACAATTCCTTCGTGTTTGATGAAAATGAGTAAGACCCTTGAGTTATTAAATCTTAAAAAGAATAGTCTCATGGGCCCCCTCCCAGATAAGTTTTCAGCTGCCTGTGCTCTAAGGACTCTGAATCTGCGTCAAAATAAATTAGATGGAAAGATTCCGAAATCTGTTTCTGATTGCACATCATTGGAAGTATTGGACCTTGGAGAAAATAAAATTATGGATGTCTTTCCGTGCTTGTTGAGGAAGATATCCACACTGCGGGTCTTAGTCTTGAGAGAAAATAATTTACATGGTCACATTGGATGTCCAAACACCACTGCCACATGGCGCCTACTTCAAATAGTTGATCTAGCCTTTAACAATTTCAGGGGCAAGCTACCTGAAACCTTTTTCAAAGGCTGGGAGGCAATGATGTCTGAAGAAAACCAAGATGAATCGAAGGAAAAAAATATCCGCCATAAGATCTATCAATATGGCCAACTATATTATGAGGATTCAGTGACAGTTACAATGAAAGGCCAACAGATGGATCTGGTTAAGATTTTAACTATTTTCACTTCGATCGACTTCTCATCCAACCATTTTGAAGGACAAGTACCAGAACAGCTATTTGAGTTTAAGGCACTCTATGCACTTAACTTGTCAAATAATGCTTTTTCGGGAAAAATTCCACAATCAATTAGATATATGAAGGATGTTGAGTCCTTAGACTTATCAAACAACTCACTGGAAGGAAATATTCCCACAGAACTTGCAACTTTATCCTTCCTATCAGTCCTGGACCTCTCCTTTAATCATTTGGTGGGAAAAATCCCAACAGGCACCCAACTTCAGTCATTTCCAGCTTCTTCCTTTGAAGGAAATGATGGGCTCTACGGTCCTCCATTGACAGAAGAACAAGATGGTACAGAGCCAGGGGTGTTACAAGAACACCAAACAACAGTTTCTACCATTGACTGGAATTTTATCAGTGTGGAAGTGGGACTGATATTTGGCCATGGTATGATTTTTGGTCCACTCTTGTTTTGGAAGCAATGGAGAATATGGTATTGGAAAGTTATTAACAAAATTCTCTGTTGGATCTTCCCTCGACTGTATTTTGAATATGCAACCAAGAGAGGTCAAACCTATGCAACTCTAAGGTGGCAGCATTAA