Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_35715 LG11 3493171 3494220 PREDICTED: transcription factor AS1-like
Map

Annotations  
category   relationship type   keyword
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
C/T 3493211 missense_variant p.Gly337Glu
T/A 3493213 synonymous_variant p.Val336Val
C/A 3493215 missense_variant p.Val336Leu
A/C 3493451 missense_variant p.Met257Arg
T/C 3493530 missense_variant p.Ile231Val
G/T 3493607 missense_variant p.Ser205Tyr
G/T 3493628 missense_variant p.Pro198His
C/A 3493895 missense_variant p.Arg109Met
G/A 3494194 synonymous_variant p.Ala9Ala

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_35715.1
MKERQRWKAEEDALLCAYVREYGPREWNLVSHRMNTSLNRDAKSCLERWKNYLEPGIKKGSLTEEEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREKQEINQAIGPVDNTKYDHILETFAEKLVKEHPSQSSYLMAASTGPFIHTDAPATASASASASAAAFLPLWLSNSSTTNPSPAIRPPSPSVTLSLSPSIAPPPPWLNVTTPHGDNIVVLELIECCKELEEGHHAMVAHRKEAAWLLRMVKQQLEAEKAGRRREKMEEIEAKIKALGEEQNAALDRIETEYKEQIAGLRRDAESKEQKLVEEWNAKHMRVVKCMERQVGGRIPRIDEPNGR*


CDS Sequence:
>Vu_35715.1
ATGAAGGAAAGGCAACGTTGGAAGGCCGAAGAGGATGCGTTGTTATGTGCTTATGTGAGAGAGTATGGTCCTAGGGAATGGAATCTTGTGTCTCATCGCATGAACACATCTCTCAACAGGGATGCAAAGTCATGCTTGGAAAGGTGGAAGAACTACCTCGAGCCTGGCATCAAAAAGGGGTCTCTAACCGAGGAAGAGCAGCGCCTTGTAATCCGGCTTCAAGCGAAACACGGCAACAAATGGAAGAAAATTGCTGCAGAAGTTCCAGGTAGAACTGCAAAGAGGTTAGGGAAGTGGTGGGAAGTGTTCAAAGAGAAGCAACAGAGGGAGAAACAAGAGATTAACCAAGCAATTGGCCCAGTTGACAATACCAAATATGATCATATTCTTGAGACTTTTGCTGAGAAGCTAGTGAAAGAACACCCTTCACAATCATCATACCTTATGGCTGCTTCTACTGGACCCTTTATCCACACTGATGCACCTGCAACTGCTTCTGCATCTGCATCTGCATCAGCAGCAGCATTCCTTCCTCTTTGGCTTTCAAATTCTAGCACCACCAATCCCTCACCAGCAATTAGGCCACCTTCCCCTTCTGTTACCCTTAGTCTCTCCCCCTCAATAGCACCTCCTCCCCCTTGGTTGAATGTAACAACACCTCATGGTGATAACATAGTAGTGTTAGAGTTAATAGAGTGCTGTAAGGAGTTGGAAGAAGGACATCATGCTATGGTGGCGCATAGGAAGGAGGCGGCGTGGCTGTTGAGAATGGTGAAGCAGCAGTTGGAGGCAGAGAAGGCAGGCAGAAGGAGGGAAAAGATGGAGGAAATTGAAGCAAAGATTAAGGCTCTAGGGGAAGAACAGAATGCTGCTTTGGACAGGATTGAAACAGAATATAAAGAACAGATAGCAGGATTGAGGAGAGATGCAGAAAGCAAGGAGCAGAAGTTGGTTGAGGAATGGAATGCAAAGCACATGAGGGTAGTGAAGTGTATGGAACGACAAGTAGGAGGCAGAATACCCCGAATTGATGAGCCTAATGGAAGATAA


Promoter Sequence:
>Vu_35715::LG11:3494220-3496220(-)
CAATAAGTCTAGTTATAACAAATTTTAATTCAAATAATTTTTTAAACATAAAAACCAATTAAAAAACTAAAATTAAAAATGAAATAAGACATAAATTTATACTAAGCATCCAAATTTATAAAATAAAATAAAAGCTTAATTATTGTCCTTTGTAGAAAATTGGGCTGTCTCTTTCAATTTGATAATTAAAAATATTAAATAATGAAAACTTAGTGAATATCATTTCTATTGATTCATATAATAATATTCCTTTCATTAAATTATGTTCATTAAAAATTAATATAGAATTAAAAATAAAATTTTAATTAATTAAAATATATTCTAAGATGTATATTTCAGTATTATCAGTACACTATATTCATTACATTATAGTTTTGTTTGGTGACTTTCTTGCAAGACTTTATTTAAGAAGATTGAATTTACTACTATTAATACTTGTTGGAAATATAAGGTGAAGATGATAATAAATAAGTTGAAAGTAATTAAAGTTTATTTTAAATTTTGATCGAATAATGTATTTAAATTTAAATAAATAGGAGGTATATTCTTATAGGATTAGCAGAGTGAATAATTTAGAAAGGAGTAAAAGAGAGAGTGTGGCATTTTGAAACACTGAAACCAACGTACCACCGTGCTCCATTAATGCTTTTTTCCTCTCTTTTTTTCTCTCTTGTGACCCTGTGGCCTTTCTTCCCTTGTCATGTCTAATTCCATCACTTTCTCTCTCCTTCCCAGTGCCTTGTCTTCATCCCACACCCATCTCACTCCCACAAAATATTTTCTCTCTCTTCAACAATCATGGTAACTCTGTGCCTTCCTTTCCCATTTCTCTTTCTTTTAGCTATCCAAATAAGTACCCTCCATCAACAATCAACCAAGCTGCTAGGTAGTTAGGGAGCAACATCAACCCTTTTACCACATCATCACCACTTTCTTCTTCTTGCATTCTCACCATTCCTCTTAGCAACCAACAAGGATGAGTTTATCTTTGTGTTCAGGGCTTTAGGATGGTGCGGTTTGATACAATGTTCTTTTCTATGTTTTTCTATCTCTCTTTGTGCATTTGTCTTTTGATGTTGTTTAAGGCACTAGATTGTGGAAGTTTTGTATTGAAACGCTTTGTTTGTTTCGGCTTTGTTATCTTTGGGTTGGTGATGATTTAAGTTTTGATTTTAGAATAATTCTTTAAAATACTAAATGCATTTACTCTTTTATTGAATATTTTCTTTATAAACTAGTAACTTTCGAGTTTTTATAGCTGATTCTATAATGAAAATGAATCACTGGTTCAGTTCTTATTTATGTGTTCCGTTCATTTGAGATTCTACTGGATACGAAATGCAGTGATATGCTGAAATTCATGTAATTCAATAAAAGAATTTAAGTAGTGTATTTTTTGTCTCATCGAAATGAATGCTTCGGATTCTATTATTCTATTTTGAAAAAAGAGATAAGGAGGATAGTTTTGTTTTATTGAGTGATGTGATTGTTTTTGGCTACTACCCTTATATAATTATTAATAATTCAGAAAACTGTATATTAAAGGACCTGAAAAATTATTCACTTTTAGAAAGGTTTGTTGCGGACATTTTTTTATTCAGTAGTATGCCAATTGAATTTTTCTCTGAAAGATGATGACAAAATAGCCATTATTTTAAACTGCTTTCACCGATTTATAATCAATTTTCACTTGTCTATGGAAGATCTTGACTAAATAGTCATTCTCTATTATGTATGCTTTACATGCATTATACATACTGACTGTGTACTGGATTAAATTTCATTTCTGGGTTTTTAGTAAACCTAATTCCCGAGTGGGTTAAGTGTTCTATTCTTAGTGAAACTCCTGGTTTTTAATAATGTTTGTCTTGTGAATCAACTTTTAAATGTACAAGTTTATGTAACTATCCAATTTCACGTCATTGTTGTGATGAATTATGCAGATACAGTAATGAAGAGTTCAAAATTGAAGAAATGGGCAGTTGGATTTGCAGTTGGAA


Gene Sequence:
>Vu_35715(-)
ATGAAGGAAAGGCAACGTTGGAAGGCCGAAGAGGATGCGTTGTTATGTGCTTATGTGAGAGAGTATGGTCCTAGGGAATGGAATCTTGTGTCTCATCGCATGAACACATCTCTCAACAGGGATGCAAAGTCATGCTTGGAAAGGTGGAAGAACTACCTCGAGCCTGGCATCAAAAAGGGGTCTCTAACCGAGGAAGAGCAGCGCCTTGTAATCCGGCTTCAAGCGAAACACGGCAACAAATGGAAGAAAATTGCTGCAGAAGTTCCAGGTAGAACTGCAAAGAGGTTAGGGAAGTGGTGGGAAGTGTTCAAAGAGAAGCAACAGAGGGAGAAACAAGAGATTAACCAAGCAATTGGCCCAGTTGACAATACCAAATATGATCATATTCTTGAGACTTTTGCTGAGAAGCTAGTGAAAGAACACCCTTCACAATCATCATACCTTATGGCTGCTTCTACTGGACCCTTTATCCACACTGATGCACCTGCAACTGCTTCTGCATCTGCATCTGCATCAGCAGCAGCATTCCTTCCTCTTTGGCTTTCAAATTCTAGCACCACCAATCCCTCACCAGCAATTAGGCCACCTTCCCCTTCTGTTACCCTTAGTCTCTCCCCCTCAATAGCACCTCCTCCCCCTTGGTTGAATGTAACAACACCTCATGGTGATAACATAGTAGTGTTAGAGTTAATAGAGTGCTGTAAGGAGTTGGAAGAAGGACATCATGCTATGGTGGCGCATAGGAAGGAGGCGGCGTGGCTGTTGAGAATGGTGAAGCAGCAGTTGGAGGCAGAGAAGGCAGGCAGAAGGAGGGAAAAGATGGAGGAAATTGAAGCAAAGATTAAGGCTCTAGGGGAAGAACAGAATGCTGCTTTGGACAGGATTGAAACAGAATATAAAGAACAGATAGCAGGATTGAGGAGAGATGCAGAAAGCAAGGAGCAGAAGTTGGTTGAGGAATGGAATGCAAAGCACATGAGGGTAGTGAAGTGTATGGAACGACAAGTAGGAGGCAGAATACCCCGAATTGATGAGCCTAATGGAAGATAA