Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_35592 LG11 1919413 1920849 PREDICTED: dof zinc finger protein DOF5.1-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/A 1919443 missense_variant p.Phe11Ile
T/A 1919444 missense_variant p.Phe11Tyr
C/T 1919453 missense_variant p.Ser14Phe
T/A 1919511 upstream_gene_variant
T/C 1919518 upstream_gene_variant
A/G 1919567 upstream_gene_variant
A/T 1919629 upstream_gene_variant
A/G 1919642 upstream_gene_variant
C/T 1919658 upstream_gene_variant
T/C 1919662 upstream_gene_variant
T/A 1919710 upstream_gene_variant
T/A 1919839 upstream_gene_variant
A/C 1920207 synonymous_variant p.Gly122Gly
C/A 1920354 synonymous_variant p.Pro171Pro
A/T 1920420 synonymous_variant p.Ile193Ile
A/T 1920656 missense_variant p.Lys272Met
G/A 1920834 synonymous_variant p.Ala331Ala

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_35592.1
MVFTSIPASYFDASNWQQQQPNNQPGGSDSNSQQLLQPPPPPLPVAMQSHGEGSIRPGSMADRARMANMPMPEVALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKRSKGTGGSGGGSNSPATSERQTGSVNSTNSGSSKSERIGLAPQIPAFRFMPPLHQLGDFGDGDISLNYGLSYGPVGGVGDMGYQIGTSALGGGATSIFSAPGLDQWRMPQQFPLLASLEGSSPASNLYPFEGSAEVSGYIRPKVSTSGIMAQIASVKMEERKEPDLSTLFLGNDNPVNEHYWTSASSASWTHISGISSSFTASNHL*


CDS Sequence:
>Vu_35592.1
ATGGTTTTTACTTCCATTCCAGCTTCTTACTTTGATGCATCCAATTGGCAGCAACAGCAACCAAATAACCAACCCGGAGGCAGTGACTCCAACTCTCAGCAGCTGCTTCAACCACCACCGCCACCACTTCCGGTTGCAATGCAGTCTCATGGAGAGGGTTCAATCAGGCCAGGATCCATGGCGGATAGGGCAAGGATGGCCAACATGCCAATGCCAGAGGTTGCACTCAAGTGTCCACGCTGCGAATCCACCAACACCAAATTTTGCTACTTCAACAACTACAGTCTCTCCCAGCCCCGCCATTTCTGCAAGACCTGCAGGAGGTACTGGACCAGAGGCGGCGCCTTAAGGAGTGTCCCCGTGGGAGGAGGCTGCAGGAGGAACAAGCGGAGCAAAGGTACCGGCGGCAGTGGCGGCGGCTCCAACTCTCCGGCAACCTCTGAGCGCCAGACAGGAAGTGTCAATTCTACCAACTCGGGATCTTCGAAGAGTGAGAGAATAGGGCTTGCACCCCAAATTCCAGCCTTCAGATTCATGCCTCCATTGCATCAACTTGGTGACTTTGGAGATGGAGACATAAGCCTAAACTATGGCCTCAGTTATGGCCCAGTGGGAGGAGTAGGAGACATGGGTTATCAAATTGGAACAAGTGCTTTAGGTGGTGGTGCCACCTCAATCTTCTCTGCACCTGGTTTGGACCAATGGAGAATGCCACAGCAGTTTCCCCTCTTGGCCTCCTTGGAAGGTTCTTCACCAGCTTCTAATTTATACCCTTTTGAAGGTAGTGCTGAGGTGAGTGGATATATAAGGCCAAAGGTTTCAACTTCTGGGATCATGGCTCAGATAGCTTCGGTGAAAATGGAAGAACGTAAGGAACCTGACTTGTCAACACTTTTCTTGGGAAACGATAATCCAGTGAATGAACATTATTGGACCAGTGCTAGTTCTGCATCTTGGACACATATTTCTGGGATTAGCTCCTCTTTCACTGCGAGCAACCATCTATAA


Promoter Sequence:
>Vu_35592::LG11:1917413-1919413(+)
ATGGCTGGCGGAGGAGTCCTAGTAACCCCATCCCACTCTCTGGTGGTGTCAATTTGTATTTCTACTCCTTCGTCCGCAGCATCCTCGGACGAAATAAGGGTTTCGGGATGGAGAAGCATCTCCAGCAGCATCGTGTGTCAATGATTGATCCCTTCCATCGCTGGAACCCGAGATAAAAGACCTTATTGATGAAGACGACTCCCTTGCAACGTCAGCATACCGCCGACCTTCACCAGCGAGCTCATCGGACGACCCTGAGGTAGAAGACATGGTTACTTGGAAGAAAAGGATGCAAAGATTGGTTAGAGAAGAAAGATCAGTCGAAGAAGAAAGGTAGCGTGATAGTGACAGTGACCCCACCTCCTATTTATAGCTGAAAAAAGCGGTTCCCAGAATTCAATATCAATCGTCCATCACACTTGAATCGGATGGCTAAGGGAGTTCAATCTTTCAAATTCAACGGTCATGGATCTCATGTTTCCACGTGTCCTATGATCAACGGTTAGATAACTGCACAAGTAAACATTTTCGTGCCACTTTTCAACCGATCAGCATGAAATAAACCCCTTCACTATTGTTGACAATTGCTTAGGGCTTGGGGGACCTGTGTACTATATGGAATACACCGGTCGACACCATAGCAAGAATCAACTTACCTAATTGAGTAGCCAATCAGTCAGACCAGTTCGTCGAGGCAATGCATAACAAGAATCAACTTACCAAATTGAGTAGCCGATTGGTTAGACCAGCCGATCAAGGCAATGGTTATTTATGGAAGTTATTAGGTATGCAAACATGTATTAATGGCCAATTAATGGATTAGATTGCCTTATGCTCTACAAATATACGATATTAATTGTTTATTATTGGATTTGATTGTCTAAAAATATACTGTATTAATGGTTAATGAATGAGCTTGTCTGCCACAAGCCCTATAAATAGGTTATTAATGTTCAACTAATGATACTCTTTTCTAAGCTAATTAAGTTGAGACCTTATTGAGAAACATATCTGACTTGAACGTCATAGTGTCTTTTACAAGTTAACAATCCGTTGAAGTGGATTACGTTCGCAAAGAGAGTTTGATAATCAAAATAAAACAGGCTAAAAAATTAGACAATCAGAGTTGATTAGAGAAAGAAAGGACGATCGTCTCACGACTCTTTCAACCGAAACACCTTTTAATTTAAACAACTTAATTTTTGTGTTTTCTTTTTCTCTTACACTCAGTCTCATTCTTTCAAATCTATTTTTAAGTCTAAACATAAGGATGATGAGTGAAAATTATATAGATGATATACCTCATTCACATGTAGAAAAAATTTGACCATTTAATAGGTTCCATAAAAGTTCGATTTACAGGTGTTGTTGACTCAATTATGATGTTGGTTCTCCTATTATTTTGATTAGTGTGCCCACTCGCCATGTGGTGACGCGTGAGAGTGGTGAGGATAAATTTCAGAAATCAAGTTTAGTATGGAAGGGAACAGACCGGAGCAAGAAAAGGTTTCGACAAATGTCCAGCACTAAAGCACCAACAGCCACCTTTTTCTTTGATATAAAAAACATTAACACCTTCATTCATTACATTCCTCACCTTAATCTATAGTTTTTACAACACAACCGCATCATAGTTAAGGTTTTTGACCTATTCTAAACCAAATTAATTCCTGACACATATAGGCTGGTCGATCAGCCGCTAGCACTGATCTCACTGTCTTAGCACAGTAGTCACAGTCTTGCAAAGCATAGAAAGAGGAGCTTATCTGTTTAAGAAACCACCACCTCAAAACCCTAGAAAGTTAAAAATAAAAGGTGTTACAAGGGTTACTAAACAGAATGAACATCAGCATTATATATAAATACTTAAAGGCCCTTCCTTATCTTTAGCTCGTCATTACACAGTCTTCTCTTCTCTCTTTCCTTCTCAATACACACATTCATGTGATTTTCTCTCATAAAGCTTTACAGTAGAAAAACTAAGCTCCGAGAGTGAATCA


Gene Sequence:
>Vu_35592(+)
ATGGTTTTTACTTCCATTCCAGCTTCTTACTTTGATGCATCCAATTGGCAGCAACAGGTAAATAAAAGACACGAGTTTCTTCAGTTTGTCCCCTCCTATGGCTTCTTTGTTCAAAGGCAAAAGATTTCAAAACATTAAACAAAATATTCTTCTTACTTTTTACTTATGTATTGAATATACCTGGCATTTCATGTCCTTCCTTTCCTCTTCTTCATCATAATTAATTTTGAAAAAAGAAAATGCTACGTATTATTTCTTTCAACACTCTACTTATAATTTTTTTAATTACGTAATTCATTAAATATTATGTATTACAAATTTTAATAAGTTAAACTTTTTGTATAAAACTTTATGTGAGTATATGAAATAAAAAAAAGAAATTCAGTAAATGAGAAAAAGGATGTTTAAAAAGTACTCTAGAGAATGTTAATAATATTTCTCTTATTTTTAACCTCTATTCATTTGTATTGTGCTTATACGTTGTAGCAACCAAATAACCAACCCGGAGGCAGTGACTCCAACTCTCAGCAGCTGCTTCAACCACCACCGCCACCACTTCCGGTTGCAATGCAGTCTCATGGAGAGGGTTCAATCAGGCCAGGATCCATGGCGGATAGGGCAAGGATGGCCAACATGCCAATGCCAGAGGTTGCACTCAAGTGTCCACGCTGCGAATCCACCAACACCAAATTTTGCTACTTCAACAACTACAGTCTCTCCCAGCCCCGCCATTTCTGCAAGACCTGCAGGAGGTACTGGACCAGAGGCGGCGCCTTAAGGAGTGTCCCCGTGGGAGGAGGCTGCAGGAGGAACAAGCGGAGCAAAGGTACCGGCGGCAGTGGCGGCGGCTCCAACTCTCCGGCAACCTCTGAGCGCCAGACAGGAAGTGTCAATTCTACCAACTCGGGATCTTCGAAGAGTGAGAGAATAGGGCTTGCACCCCAAATTCCAGCCTTCAGATTCATGCCTCCATTGCATCAACTTGGTGACTTTGGAGATGGAGACATAAGCCTAAACTATGGCCTCAGTTATGGCCCAGTGGGAGGAGTAGGAGACATGGGTTATCAAATTGGAACAAGTGCTTTAGGTGGTGGTGCCACCTCAATCTTCTCTGCACCTGGTTTGGACCAATGGAGAATGCCACAGCAGTTTCCCCTCTTGGCCTCCTTGGAAGGTTCTTCACCAGCTTCTAATTTATACCCTTTTGAAGGTAGTGCTGAGGTGAGTGGATATATAAGGCCAAAGGTTTCAACTTCTGGGATCATGGCTCAGATAGCTTCGGTGAAAATGGAAGAACGTAAGGAACCTGACTTGTCAACACTTTTCTTGGGAAACGATAATCCAGTGAATGAACATTATTGGACCAGTGCTAGTTCTGCATCTTGGACACATATTTCTGGGATTAGCTCCTCTTTCACTGCGAGCAACCATCTATAA