Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_35557 LG11 1340185 1341922 PREDICTED: trihelix transcription factor ASIL1
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   response to salt stress, response to salt stress, hormone-mediated signaling pathway, hormone-mediated signaling pathway, regulation of transcription, DNA-templated, response to osmotic stress, hormone-mediated signaling pathway, response to osmotic stress, response to mannitol, regulation of transcription, DNA-templated, hormone-mediated signaling pathway, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated
Cellular Component   is active in   nucleus
Cellular Component   located in   nucleus, nucleus
Molecular Function   enables   transcription cis-regulatory region binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding
SNP Position Effect Amino acid change
T/C 1340188 3_prime_UTR_variant
G/A 1340201 3_prime_UTR_variant
A/T 1340287 3_prime_UTR_variant
A/G 1340335 3_prime_UTR_variant
T/A 1340572 intron_variant
A/T 1340618 intron_variant
C/T 1340619 intron_variant
G/T 1340808 intron_variant
T/C 1340966 synonymous_variant p.Ser237Ser
A/C 1341109 missense_variant p.Tyr190Asp
C/A 1341152 synonymous_variant p.Ala175Ala
C/T 1341256 missense_variant p.Asp141Asn
A/G 1341278 synonymous_variant p.Asp133Asp
G/T 1341335 synonymous_variant p.Leu114Leu
G/T 1341340 missense_variant p.Pro113Thr
G/T 1341457 missense_variant p.Arg74Ser
G/A 1341500 synonymous_variant p.Cys59Cys
G/T 1341503 synonymous_variant p.Arg58Arg
T/G 1341512 synonymous_variant p.Val55Val
C/G 1341518 synonymous_variant p.Val53Val
G/C 1341592 missense_variant p.Arg29Gly
G/A 1341684 5_prime_UTR_variant
G/A 1341723 5_prime_UTR_variant
G/C 1341836 5_prime_UTR_variant
A/G 1341898 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_35557.1
MATPNDAASPTKKPQPIPWTHQETVHLIRAYQEKWYALKRGPLRHNQWEEVAVIVAARCGYDLAYPAKSALQCRHKMEKLRQRHRAEKKHVAATLRPAAWQYNALMEDLECGPLPISALAPFQNDTDSDPDDDGTYRNGNDGDESFVKSKSINCILGERPVRMKSGERGFLRERAEEERDEDDDDDRDDYVLALPAEIRAFAERFIGMESLKMEMMKETERCRLEMEKKRIQMIVDSQRRIVDSIGRAFGSNKRVKITQQI*


CDS Sequence:
>Vu_35557.1
ATGGCCACCCCAAACGACGCCGCTTCGCCGACCAAGAAGCCTCAACCCATCCCCTGGACCCACCAAGAAACTGTCCACCTCATCCGCGCCTACCAGGAGAAGTGGTACGCGCTCAAGCGCGGCCCACTCCGCCACAACCAGTGGGAGGAGGTCGCCGTGATCGTAGCCGCCCGCTGCGGCTACGACCTCGCGTACCCCGCCAAGTCCGCCCTCCAGTGCCGCCACAAGATGGAGAAGCTCCGCCAGCGCCACCGCGCCGAAAAGAAACACGTCGCCGCCACGCTCCGTCCCGCCGCCTGGCAGTACAACGCTCTCATGGAGGACCTCGAATGCGGCCCCCTCCCCATCTCCGCCCTCGCCCCGTTCCAAAACGACACCGATTCAGATCCCGACGACGATGGCACTTATCGGAACGGCAATGATGGCGATGAGAGCTTTGTGAAGTCGAAGAGTATTAACTGTATTCTCGGCGAGAGGCCCGTGAGAATGAAAAGCGGTGAAAGAGGGTTTTTGAGGGAGCGTGCGGAAGAAGAACGAGACGAAGACGACGATGACGATCGCGACGACTATGTTTTGGCGTTGCCGGCGGAGATTAGGGCTTTCGCTGAGAGGTTTATTGGAATGGAGAGTTTGAAGATGGAAATGATGAAGGAAACTGAAAGGTGTAGGTTGGAGATGGAGAAGAAGCGGATCCAGATGATTGTGGATTCACAGCGGAGGATCGTTGATTCCATTGGGAGGGCGTTTGGGTCTAACAAGAGGGTCAAGATTACTCAACAAATCTGA


Promoter Sequence:
>Vu_35557::LG11:1341922-1343922(-)
ACTACGTACTTGTCCGGGGAAGCTCGTTATAAGAGTGATGGGAAATGACACCATATATTGGTATGGTATTAGTTATCTGCTTAGGGAAGCTCTTGAATAAAGTGATGGGAGTTTACTCTTACCCTTTGTAATTATATGTGAAGTTATGATTGTTGGTTGGATTAAAATTGATAGTGTGAATGGTTTGAGTGCATGTTGTAATGATATTTGTATTTTATGCTTCAATTTCTTTGTTAGCTCACCCTTGCTTGTTTGTGCATGTGACATGATGATCGTATAATTTGTGGTGTTAGACGGAGTTGGCAATATTACAGATGAATTTACTGATGATTTTGGACTTGCTTAAGAGATGTGAGACATGCGGAGAAAGAGCCCTTGGGGAATTTTCTAAAAGATTTTATATCTTGAATAATACCATTGAATGATGTGTAATTTTATCTTTCAAAGACTTGTGTTGTAATAAAGATACTATGCTTTTGTTGGTTTTGAAACTTATGGTTGGCAAAAAAAAATTAGCGAATGTTTTAAGCAAATGAATAGTAACACCTAGATCGGGGTGTTACAATGAGCAACTACCTCCATTGATCTTCGTTGTTCCTTTGCTGTGTTATTCTCATTTTGATAGGACCAATGCTTGGGCCCTAAGTCATCAGTTTCTCTTACGAAAATCTACAAATTCCTATTGCATCCTTGCTTGGTTTTTCAGGATCACAGCCATATCAACCGTAGAGGGATCGACTTCTCTACTAGCTCTTACTCTTATGGAAACCATACTTGAAACTTCGCTTCTTGACATAGCTAACTTCTCTTCACAAAATACCTGTCAGTCCCATAGTGGTTGCCAATTTTTCTTGTGAAACAGAATGTACCCTACAAAGTCTCCTTGTAGACCACAAACTTTTCACTACCGTCGTCCTCCAAGCTTCCTTCGTCCTCTACTGGATGGTGGTGTGCTTACAAAAGATCCTCTGATGCTTAGGTTTGTACTTGGTCAAAGGTTCTGGTCAAATTTGGATTAATGCGAAAAATTAAAGTCAAAGTACGATAAAAATAATATTTATAAGAGTACCTTGTTGACCATAGACCCCATTCGAATGGGCCACAGTTCTAGGCCCATTGGATGACCTAGAGGTCCAATGGACCAACTTAGCTATAAGAAACTGAACCTATTTTTAGCTAAGTTATCCCATTCGAAAATGTTTCCGACATACATAAGGAAATACTAGTAGATGATACTCTAACTTACTGAACAAAGTTGTTATCAAAATAAATACACTCTTTAGTACTAAATAGTACTTAGTACCCGATATTCAATGTCTAACTAAATGATCTATTCATAAAGTATCTAATAGTTATCTTATTGACTACATACTATCCGATAGAGGTATCCAATAAACATTATCATATCATTATCTTAAATAACTCAATAAAAATTATAATTAGAGTCTAGAGATCTTCAACCATATAATATATATATATATGTATATATATATATATATATGTATATGTATATATATATATATGTATATATATATATATGTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTTATTGATGGTTATATTAATATCTTACTTAAAAGATTTAGTAAATAATATATTCTATATGATTAGTTAAAATCAATCTCTCGAACTCAAGCCTTTAATTATAATACTTCCTAATATTATTGTTCTTCATCTCATTCTATTGGATAATCAATGTTGTTCATATGATACAATTTGTAGTCTCTCACTACATACAATAGGAAAATCTCCTGAGTGCTTTTTTATGTGTTGGCAATTTTTGATTAATAATTGGACACTGTGTAGGATACTTTGTAACGAAATCTCTCCAAGAAATATGTGAGATGATAAAACAGCCAAATTAATTAACAGGAACTACACAAAATTACAAAATTTATATCACATAATAAAATATTTAAATTTAAAGCATAAATGTAATATGGGGT


Gene Sequence:
>Vu_35557(-)
GTAGCATCTTTTACCACAGCAGCATGTGTCCATGGTGAAGAATATGATGGATGGAATGACTATCCACCGTCACCACCCCAACCCACCCTTCCACTCCAACCGCCGCCACCAAATGTCAACCAAACCCACCAACACCTTTCCTTACACCCACCACTCCAATTTCTCACACCCACTCCAATAATAACAACCTTTATAAACCCAAAACACCCACCACACACACCACCCCACACCACACCCTCTCTCATCATGGCCACCCCAAACGACGCCGCTTCGCCGACCAAGAAGCCTCAACCCATCCCCTGGACCCACCAAGAAACTGTCCACCTCATCCGCGCCTACCAGGAGAAGTGGTACGCGCTCAAGCGCGGCCCACTCCGCCACAACCAGTGGGAGGAGGTCGCCGTGATCGTAGCCGCCCGCTGCGGCTACGACCTCGCGTACCCCGCCAAGTCCGCCCTCCAGTGCCGCCACAAGATGGAGAAGCTCCGCCAGCGCCACCGCGCCGAAAAGAAACACGTCGCCGCCACGCTCCGTCCCGCCGCCTGGCAGTACAACGCTCTCATGGAGGACCTCGAATGCGGCCCCCTCCCCATCTCCGCCCTCGCCCCGTTCCAAAACGACACCGATTCAGATCCCGACGACGATGGCACTTATCGGAACGGCAATGATGGCGATGAGAGCTTTGTGAAGTCGAAGAGTATTAACTGTATTCTCGGCGAGAGGCCCGTGAGAATGAAAAGCGGTGAAAGAGGGTTTTTGAGGGAGCGTGCGGAAGAAGAACGAGACGAAGACGACGATGACGATCGCGACGACTATGTTTTGGCGTTGCCGGCGGAGATTAGGGCTTTCGCTGAGAGGTTTATTGGAATGGAGAGTTTGAAGATGGAAATGATGAAGGAAACTGAAAGGTGTAGGTTGGAGATGGAGAAGAAGCGGATCCAGATGATTGTGGATTCACAGCGGAGGATCGTTGATTCCATTGGGAGGGCGTTTGGGTCTAACAAGAGGGTCAAGATTACTCAACAAATCTGAAAGAGGTTTCATTTCATTTTATTTTCCACTTTTAATCATTTTAATTTTTATGTTTGGATATTCATTAGTTCACACACTTTTGCTTACTCATTTTAGTCAAGATTAAACATGCTTTTGGGGAAAATGTTTACCTTTGGTCTTTTTGTGTATGGAAATGGAAATGTATTGGGAATCCAAATGTGTAAGTTAGCAGTGAACAAAGGACACAGACCAATAAACTTATATTCTCTTTAAGATTTTGGTTTTAAGTCAGAGGTGGTTATGTAATGTGGTTTCAATCAAAAAGCTTTAATGAATATCATTCTTTATGAAAAAGTGAGCAAACTGACAATCCATGGCAGTTTGGGATTGCTTGACATGTAAAAGGACTATTACTATGTTCGTATATGTATTATTTATTATTCATTCCTAAAAACAATGTTTAACCTTTTTAATTGCATTTTCTTGTTTATTGTTTTTGTTCACCTGGTTTATGGATTCATGGTTACATGTTTGATCTGCCTGCAGATTGTGAAATATATAATGATCGAGATAAACTCTGAATGGTTTCTACTATGGAAGAGTCTACAGAAATAGTTGCATAGCGTGCTGCTAGTTGTTTATTCTATTTATTATTGCATTTGAAGTCTGTACTTCTCACATTAATGAGGGTAAGTTCATTTTTTGGCATAAGTTGATTATAATGCAAGCGATATCTTTACAATTA