Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_35522 LG11 889675 892722 PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X1
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Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/C 890004 intron_variant
T/A 890068 intron_variant
A/T 890080 intron_variant
T/C 890082 intron_variant
T/A 890096 intron_variant
T/G 890097 intron_variant
A/C 890099 intron_variant
T/G 890101 intron_variant
T/C 890102 intron_variant
T/G 890339 intron_variant
A/G 890358 intron_variant
G/A 890599 intron_variant
T/A 890744 intron_variant
T/G 890748 intron_variant
T/G 890784 intron_variant
C/G 890909 synonymous_variant p.Ser59Ser
C/A 890928 missense_variant p.Gln66Lys
T/A 890966 intron_variant
A/G 891033 intron_variant
C/T 891047 intron_variant
T/C 891048 intron_variant
G/A 891139 intron_variant
A/T 891332 upstream_gene_variant
A/C 891600 upstream_gene_variant
T/C 891687 upstream_gene_variant
G/C 891707 upstream_gene_variant
G/C 891713 upstream_gene_variant
A/C 891881 stop_lost p.Ter85Serext*?
A/G 891982 missense_variant p.Thr119Ala
A/C 892059 upstream_gene_variant
A/T 892069 upstream_gene_variant
A/G 892178 upstream_gene_variant
A/G 892208 upstream_gene_variant
T/A 892215 upstream_gene_variant
G/C 892317 upstream_gene_variant
A/G 892340 upstream_gene_variant
A/T 892542 upstream_gene_variant
A/T 892587 upstream_gene_variant
T/A 892664 stop_gained p.Cys189*
G/T 892692 missense_variant p.Ala199Ser
A/T 892695 missense_variant p.Asn200Tyr

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_35522.1
MVSLRRRRLLGLCSGNSSFVTPLPLHCEHLTATEASGQQVQNTIVKDEPGSSNASGSSLSKEDSSQQSLGPPVKRRKQHLRKHAHDKEPCFMRGVYYKNMKWQAAIKVDKKQIHLGTVESQEEAAHLYDRAAFMCGREPNFELQEEEKMELCKLKWEDFLAMTRQAIISKKHKRKHSPEAKDVSMEVSVHSVDRKVVNLNQQTTVSKDLS*


CDS Sequence:
>Vu_35522.1
ATGGTAAGTCTGAGAAGACGTAGACTGCTGGGACTATGTTCAGGAAATAGTTCGTTTGTCACTCCCCTTCCTCTTCACTGTGAGCATCTGACTGCTACTGAAGCTTCGGGTCAGCAAGTTCAAAACACTATTGTGAAAGATGAACCGGGATCATCAAATGCATCTGGTTCCAGCTTGTCCAAAGAGGATTCTAGTCAACAAAGCCTAGGACCACCTGTTAAACGCAGAAAGCAACATTTAAGGAAACATGCTCATGATAAAGAACCATGTTTTATGAGGGGGGTATATTACAAAAACATGAAGTGGCAGGCAGCCATAAAAGTAGACAAGAAACAGATCCATTTAGGAACAGTTGAGTCACAAGAAGAAGCTGCTCATTTATATGACAGGGCTGCTTTTATGTGTGGAAGAGAACCCAATTTTGAGCTTCAGGAAGAGGAGAAAATGGAATTGTGTAAACTAAAATGGGAAGATTTCTTAGCAATGACTAGACAAGCAATTATCAGCAAAAAGCATAAGAGAAAACATAGTCCTGAAGCAAAAGATGTCAGTATGGAAGTTTCAGTGCATTCTGTTGATAGAAAAGTAGTAAATCTAAACCAGCAAACAACAGTCTCCAAAGATCTGAGTTAG


Promoter Sequence:
>Vu_35522::LG11:887675-889675(+)
TAATAATAATATAAAAGAAATTTAGATATTTCATATTATGAATATTGATAATATATAACAAATGAAATTTATTTTTTATTAATATTTTTATGTGATTATGGTATATTATTTTAAATCCCCAAGCATCATGTAAAGATATATAATTCTTTTAAATCGCCAAAAATATTTCAAATTGAATATTTGGATAAATCGTGACAGATTTTTTTATTTAAAAGATATTAACCAATTCTTTTATAGTATTCATGATCATCCTGTTCTTTTCATATAAACTGAATTATATTTTGAATTTAATTAAAATATATTGATGATATACAATAAATTTGAACTTTTATAATTGTTATTTTAAAATTTATTAAAAGTTGGTATATCTATGTTATTAATAAAGAAAATGTATCTTCATAACAACTTTCTAACTACCTTGAATATAATTTGTTATCAATTTTATCATTATTAATAGAATATATTTTATTGTTTTTAGATTTTGTAGTTATTTTTTAAAATTGAATTAATTATCTACAACAAAATTGCTGTCTATAATAAAGTTGTAAATATTATTTATTTTATAATATTTTTATATGAATAAACATTTTTAAAAATTTAATAATACTTTTTTATTTTAAAAAATATAATAAGAGTTATTTTTTCTTTTTCTTTTTTATTATCATGAGAAAAAAATTAACAAAGCGCAGGCACATGTTTTTTTTTTCTCTAATGCTGATATAAAATTAGTTTTATTTATCAGTAAATTATTTTAAAACACCAAAATTTAATTTAAAGATGAAAAAAAGGAGATAGGTAACATATCATAAAAAAACTGCTAAGAAAATTATAATTAGAGAATTAATCCAATATAACATATTCATCTTGATAGCATTACTTGATTAGAACACCTGCGTATATGGGAAATCTCTCACCCTTTATTTCAAAAGGGTCAATATAGTAAATGCATCGTGTTTCTCAAACTCGTAACAACCTTATACCTATTTCTTTTTCTTTTAAAAAGTACATCACAGTCATTCAAATATCGAATCAAAACCTTGTATACAGAACTTTCTTGTAATCACTTCAATACCCTTCTTTTATATATAAGTCACACTACAGAGGCTGTGGAATAAAGCACACACCAAACATCAAGGTCAGGGTTGATGGTAGATGTATCTGTAACAACAATAACAATTTACGTAAATCTTCATCACCTTTTCCTTCACAAGTTGGCGCAAACCAATTTTCTTATTCTCTCAGTTCTTGTGTTAAGGAGTTGCCTAGACTGATTTCTTTTCATTGTTTTTAAATTTCTCTCTGGGCTTAGTGGGTTTCTCTTGGATTTTTGTCTTGACCTACGTGTGAATGTCTGCTATGTTTTGTTCTGTGTGTGTGGTCAATTGGGTTTTGGTGGAAAAGGTGTTTGGTTGAGGGGTTGACCCAAAGCAGAGGATTCTGAGTTCGCGCAGATGAGATGATGTTTGTGTGGATGAATTATTTTATTATTTTTTGTTTCTACCAAATTAATATTATTGTGGCGTATATTAATTAATTCTGGGAATTTTACTTTGTCATGCTTTATTTTCTTCTGCAGTTTTTTGGTTTATGTTTTTGGGAAGAGTTTAGTGTTGATGTGTTTTCATGGGCTAATTGTTCTTTGTGAGATGTTATGTCTGGATTACCGATTTGCATGATTACACATTTGAGGGTTTTAGTGGTGGTTAGAATTGTATGGTGATGATCAAGGTTTATCTGCACTTGTATAGGTTTGTTTTTGTATGGGTTTGTCCAAGGTGGTCTAAAGATGAAAAAAAGTTCTCACTTTGATTGCATTTGCATTCTGGGATATCTTTCTTGATGTTTATGCAATGTCTTTGTTCTCCTATGTTTATGTTCCTATTTGTCTTCTCTCTGAGAATGTTTTATTTTTGTTGCAGGTACTCCTTCTCTATTGAAGGGAGATTGATACTGCTACCGGTGTCCTCTACAAAATTTGCTTTGTAAATTGAAACTAACAA


Gene Sequence:
>Vu_35522(+)
ATGGTAAGTCTGAGAAGACGTAGACTGCTGGGACTATGTTCAGGTGAATGTTTCATAAAATATTTCATATAACTTGGTTTAAGCCTTTTTTAGTCTTGAGTTTTCTTTTGTAGCTGAGTTTGCTAAAATTGACATTATTTACTAATTTGATTCAAAATTTGTAGGAAATAGTTCGTTTGTCACTCCCCTTCCTCTTCACTGTGAGCATCTGACTGCTACTGAAGCTTCGGGTCAGCAAGTTCAAGTGAGTGAACAATCTAATTTTTCTGATATGACTCACTTCTCCAATCCTCTAGGAACTAATGACTGATTGTATATTTCTGTTGGTGATTTGTTTGTTTCCTATAGTGGTAATATCTGGGTGTTTGGTCCTCTTGTATTTAATGTGATAACTCTTTTTTTCTTAATATTTTGCACTTCATTAATTTTAAATTATTGGTGTATGTGAAATTGAGGCATGAGTTTAACGTCATTTATGTAACTTTCTACAATTGAAAATGTTTAAATACTTTTGACCACTATTTATTGATATAGGATTTACACCTTCCTCTTTTCATACAATAGTTTTATGTCAAGATTCAACAAGCACAAATCATTTGTATATAAAAATTTGCATTTATGCCTCCTCGTAGTTGTTTTTGGTTTACAAGAAAGGAGTTTCTCCTGTTAAGTAATAGCAGTGAAAGATAACTTGGACAAAACTAAATTGAAAAGTGATCTCCAAGCAACATTTTTCTTTTGTCATCTTCAGATGGCTGAATGAATTGGATAACTCTTTTTTCTAGCATTGGTTATTTGCTCTATCTGCTGCATTGCATATTGCATAAAAGGGCACAAGTATAGATTCACACTGAATTTGAACATATAATAAACTTCCAGTTATAGGTATCTGGTTTTCAACAAAGTCCACTAGTTCCTATGAAAGTTACTTGTGATTGTAAAAAGAAAGAGGAATAAAAGGATTGTCACGTTACATATGTTTCTGTTTGTTTCTATTCTGCTTGTTATTTACATCTGGGTTTACTTAAATCGTAAAATTTGCAACAAGCTATTGATTAATAGTAAAATCTGGATGAAGTTTTCCATTGAGTGATAAAATTAAACGTTTATTCTATCTTTTCTTTCATTTTTTTTCAATTGAGAAACTTATAATAAACACTTCTGTCTGTGTTTCCTAGAACACTATTGTGAAAGATGAACCGGGATCATCAAATGCATCTGGTTCCAGCTTGTCCAAAGAGGATTCTAGTCAACAAAGCCTAGGTTTGGTTTCCTAGACATATTATTCTTTTTGTTATATCTGATCTATTTTGTTTTGTGACTAGAAAGTCAACCTAGTAAGAGATGTTCTGCTTACAAAATCTTTGTAATGCTTCTTCCACTTTTGTTTTTTGCTATTTTTTCTTTTAATGTATTATTCACTGATTCTATACATTATGAACTGCAACAAGAAAAGTATAATGGGAAAACTCATGAATAGAAGTTGGTAAGGAATAAAACTTACATAATTCTACCTTTTTTTTTAATAAAGAAAAAGTGACACACTCTTAGTTTGTGGGAGTTAGAAATCAGTCTTATCATAGAACGCACACAAGGTCCCTTATATGAGAAGGAGATGTGTTTATGTCATTTTTTGTTCTGATTTGATAGCATTTTAAATCACTGGTCTAATTTTATCTTAGATTGCGGTCTGTCTTTCTTATTGGACCTTGTTTATGGTAATGTTTTCAGATACAAATACTGAACAAGATTATTTAACAATATTTTATTGGATATCTACAATTTCTTGGTTAATTCTTCATCTGATTGCTGCACCCTTTGAAACATTAATTTCATTGAGTTTATATTTTCTTCACTGAAATTATAGACTATAATTTTGCATAAAGCTCTTAATTGATTGACATTGAATGTTGTGCTGTGCAATGAAAATGGTACCTGACAATCATGGGTTAATTGAAAAGGTAGGAACTGTATGCTGTTTTGAACATAACATGAAATGGACAAACTTGCATTGACAGTTTACTACTGCAAGGAGAAAGTCAGTTTGATCACAGTTCATAAGCATATGGGCATTCAGTTTACTTTCTCTATTTCAAATAGTCAGAGTTTTATCTTGCTTTTGTTTGACTATAACTTACTGAACAAGCATATATCAGGACCACCTGTTAAACGCAGAAAGCAACATTTAAGGAAACATGCTCATGATAAAGAACCATGTTTTATGAGGGGGGTATATTACAAAAACATGAAGTGGCAGGCAGCCATAAAAGTAGACAAGAAACAGATCCATTTAGGAACAGTTGAGTCACAAGAAGAAGCTGCTCATTTATATGACAGGTATTGTTTGAATTGTACCATATTAATACTAAGAATGGTCTCTTTAGACAACTTCATACTCATTTACAGAATATGCATTTCTTACAGTGTATTGCTTGATAAACTGCCAAAAAAAAAACTTTTCTATTCATTTGCTCACTTATTCTAGACAACTTCCTGAGTCACAAGAAACTTACAATAGAAAAAAAATTGTACAATGGTTGTTTTGCAGCCCGCAATTGTATATTAAACTTTGTTACATATATGTAAAGTACAATATCTGCAATGAACATGAACAAGCAAAATAGTTTAAAATCTATCGATTGGAGAATTTTAGTATTCTTTCATTATACTAACTGAGCTACTACTTTGTTATCTATTTCTCCAAGGGCTGCTTTTATGTGTGGAAGAGAACCCAATTTTGAGCTTCAGGAAGAGGAGAAAATGGAATTGTGTAAACTAAAATGGGAAGATTTCTTAGCAATGACTAGACAAGCAATTATCAGCAAAAGTAATTTTCTTCCCTTTCAATTATTTTATATATAATATATATAATTATGTATTTTTGGACTTAAATTTTAACAGTTGTTCCATGCAAAATGTTCAACAGAGCATAAGAGAAAACATAGTCCTGAAGCAAAAGATGTCAGTATGGAAGTTTCAGTGCATTCTGTTGATAGAAAAGTAGTAAATCTAAACCAGCAAACAACAGTCTCCAAAGATCTGAGTTAG