Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_35401 LG10 21902988 21904112 PREDICTED: transcription factor MYB39 isoform X2
Map

Annotations  
category   relationship type   keyword
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
A/G 21903015 missense_variant p.Ile10Val
A/T 21903325 intron_variant
T/C 21903337 intron_variant
T/C 21903967 synonymous_variant p.Asp235Asp
T/G 21903976 synonymous_variant p.Leu238Leu
A/C 21903984 missense_variant p.Asn241Thr
G/A 21903988 synonymous_variant p.Gly242Gly
A/G 21903990 missense_variant p.Gln243Arg
G/T 21904020 missense_variant p.Arg253Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_35401.1
MGRSPCREEISGVKKGPWTPEEDEKLIDYISKHSHGTHLPGRTDNEIKNYWNTHIRKKLLKMGIDPETHKPRTDLNHLMSLSQLLGMSNLSSVMSSTWGNNHLGLQPDITQLAKIQLLQNLLQLMNSNSFVNMGNPYLFGNPNLNPLFLNGTNPLQTKEPVVLSGSERFANPSVYSQAQSECSQQQDVSKSLADVEGGSIPQDLDYSKISPTNTNHSRENQEENPLPALVAASPRMGTLNPMGSGCGNLGQSSEESPSNTFFDDWEKLFDDERSGSYWKEILE*


CDS Sequence:
>Vu_35401.1
ATGGGTAGATCACCGTGTCGTGAGGAGATTAGTGGTGTAAAGAAAGGACCATGGACACCAGAAGAAGATGAGAAGCTGATTGATTATATCAGCAAACACAGCCATGGCACTCATCTGCCAGGGCGAACTGATAATGAGATCAAGAATTATTGGAACACTCACATAAGGAAGAAGCTTCTAAAGATGGGTATTGATCCAGAAACTCACAAGCCAAGGACAGACTTGAATCACCTCATGAGTCTTTCTCAGTTGCTTGGTATGTCAAACTTGAGCAGTGTTATGAGTAGTACTTGGGGCAATAACCATCTTGGTTTACAACCAGACATCACTCAGCTAGCCAAGATACAACTGCTGCAAAATCTTTTGCAACTTATGAACAGCAATTCATTTGTTAACATGGGTAACCCTTACCTCTTTGGCAATCCCAACCTCAACCCTTTATTTCTGAACGGCACAAACCCCCTCCAAACTAAGGAGCCTGTGGTGTTAAGTGGTAGTGAAAGATTTGCTAACCCTAGTGTGTACTCTCAAGCACAAAGCGAGTGCTCTCAGCAACAGGATGTTTCAAAATCATTGGCAGATGTGGAGGGTGGATCCATTCCACAAGATCTTGATTACAGCAAAATTAGCCCCACCAACACCAATCATTCACGTGAAAATCAAGAAGAAAACCCTCTCCCTGCATTAGTTGCTGCCTCTCCGAGGATGGGAACCTTAAACCCAATGGGCAGTGGTTGTGGTAACTTAGGACAATCGAGCGAAGAGTCACCTTCGAACACATTCTTTGATGATTGGGAGAAGTTGTTTGATGATGAAAGAAGCGGTTCCTATTGGAAAGAGATTCTAGAGTAA


Promoter Sequence:
>Vu_35401::LG10:21900988-21902988(+)
TGCTCCACTGTCAAGGTACCACTGATTATCCTCGCCTCTATCTTGGCCCTTGTAAGCCAATAGCAAGGTACCATCTTCTTGACACCTTTCTTCAGCATAATTGGCTTTCTCTTCGACTTTATGTTTGTTAGGGGCTCTACATTCAGAAGCATAATGTCCAAACTTATCACAATTGTAACACTTGATTCGTGTCTTGTCATACCTTGAATTCAGATTTCCTCTCCCACGACCTCTGTTAGAGCTTTCTCCTCTTTGGTTATTGTTGTTAGGCCTTTGTCCTTGTCCATGTCCATATGCACGCCCTTGTCCTTGTTCTAGACTAGAACTTCGCCTTGATTGGTTGTGTGTATTTTCGTCTTTTCTTGAATCAACGTGTGCCTTGAGGACTTGCTCCGTGATCTCTTCCTTCTTCTTTTTCTTTTCTCCATAAGCTTGCAACAAACCAAGAAGTTGCTCTATTGACATGGCCTCCAAGTCTTTTGTTTCTTCGGTAATGGTGACAATATGTTCGAACTTTGGATCTAATGATCTAAGAATTTTCTCCATAATTCTTACATCATCTAGCTTCTCACCATTTCTTTTTAGGTTATTAGTAACCGTTAAAACTCTTGAAAAGTAATCAGAGACTAGTTCACCTTTCTTCATATGCAAAGCTTCAAACTCTCCTCTCAAAGTTTGAAGACGTACCTTTTTGACTTGATCTGCTCCCTTGTAAGAGATCTTAAGCTTCTTCCATGCTTCCTTGGCTGACTTGACTCTAGAAATCTTCTCAAAAGTATCTTCATCTAGTCCTTGATAGACTAGACAACCTTCTTGTCTCTCTTCCTTGAGTCTCTCTAGCTATCCTTTTGAGCTTGAGAAAGACTCTCTACAGTTTCTGGCTCAATGTGACCCTTCTCGACCACCTCCCAAACATCATGTGCACCAAGGAGAGCTACCATCCTTAAGCTCCAATTGTCTTAGTTGCTCTTAGTGAGCATTGGGACTTGAAAGGGAACTCCATTATTATGGCTCTTGATACCACTTTGTTGGGAGGAAACTTGAAAGGCTAGAAGGAAGTGTTTAAGATTGAGAGAGGTTGGAAGATTTTGAGAGAAGAGGAAAGGCTTGTATTGAATGCTTCTAAAATTTTTTGGCTTGTTTTCAAATGATACAACCATCCCCTATTTATACTAATGGCACCTCCTTAACCAATGGTTAGGATCTTGCCACCACAACATTGATCTAAGGGTTATAATTTATTCTCTAGAACTTTCTAAAACATTCCTATAATTCTAAACTTATCTAGAAACATCTTATGGATAAGCATCTTTAGATATTTTTGTAAAACATTCTAGAATCCTTCTAGACAGGATTTTCTAGAATGCTATTTGGGCCTTTGCTAATATTGGAGTTTTATCTTTTAGGTTCAACATACAAAATCAATTTATATTCCAAGAGTATGTTCATGGGAGTGTTGCTGCTTCAAAAACACATAACAAGAAAAAAGCTTTTTAGTTTGTTATTCTCATCTCGATTGTATCGAAAATCTTCAAACGTTGGACCAACAGGTCAAACCACAATAACTTAATAAAAAAGAATCCATTCGAACTATATGTGTAGGCACTTTAGGAAATTCAATGAACTTTACCTTGTGCTTAAACGACACTTGCCATACCTAATCCTGGTTTTCGTTATACATATCTGCAAATAATTAAAGTTCTCCGTGGCTGAAATATACCAAAGTGTAATCTCTAGGTAACTTCTTTCGCACAGTCATTTTTTCCGTGGTACATGTTTCCCATTTGTTTTCTAATTAAACGTAATTGAAAAAATAATAAAATGATGACATCATTTCTTGAATTCGTGTACCCTCTTCACCTATAAAACCAAATATCACCAGCAATTAAACTATGCAGTACGGTTTTAAGCCCTAACTTAGTTTTCGCTGAAAGCAGACCACCTTATAACTGTTTACCATTCTTTGTCTTGGAGCATATAACCGCTGTGCCTCTACATTA


Gene Sequence:
>Vu_35401(+)
ATGGGTAGATCACCGTGTCGTGAGGAGATTAGTGGTGTAAAGAAAGGACCATGGACACCAGAAGAAGATGAGAAGCTGATTGATTATATCAGCAAACACAGCCATGGCAGTTGGAGAACGCTTCCAAAGCGTGCAGGGCTTAATAGATGTGGTAAGAGCTGCAGATTAAGGTGGACAAACTATCTGAGGCCTGATATCAAGAGAGGCCAATTCACTGAAGAAGATGAGAGAACTATCATCAACCTTCATTCAGTTCTGGGAAACAAGTATGTACATGTCTGCTTCCTTCGTAAATTTACCTTAATTTTTGAGGATTTATATGAGAAAGGATGAAACAAATTTCTTAGCTTTTTTTTTTCTTCTAGGTGGTCGAAGATTGCAGCTCATCTGCCAGGGCGAACTGATAATGAGATCAAGAATTATTGGAACACTCACATAAGGAAGAAGCTTCTAAAGATGGGTATTGATCCAGAAACTCACAAGCCAAGGACAGACTTGAATCACCTCATGAGTCTTTCTCAGTTGCTTGGTATGTCAAACTTGAGCAGTGTTATGAGTAGTACTTGGGGCAATAACCATCTTGGTTTACAACCAGACATCACTCAGCTAGCCAAGATACAACTGCTGCAAAATCTTTTGCAACTTATGAACAGCAATTCATTTGTTAACATGGGTAACCCTTACCTCTTTGGCAATCCCAACCTCAACCCTTTATTTCTGAACGGCACAAACCCCCTCCAAACTAAGGAGCCTGTGGTGTTAAGTGGTAGTGAAAGATTTGCTAACCCTAGTGTGTACTCTCAAGCACAAAGCGAGTGCTCTCAGCAACAGGATGTTTCAAAATCATTGGCAGATGTGGAGGGTGGATCCATTCCACAAGATCTTGATTACAGCAAAATTAGCCCCACCAACACCAATCATTCACGTGAAAATCAAGAAGAAAACCCTCTCCCTGCATTAGTTGCTGCCTCTCCGAGGATGGGAACCTTAAACCCAATGGGCAGTGGTTGTGGTAACTTAGGACAATCGAGCGAAGAGTCACCTTCGAACACATTCTTTGATGATTGGGAGAAGTTGTTTGATGATGAAAGAAGCGGTTCCTATTGGAAAGAGATTCTAGAGTAA