Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_35346 LG10 20803697 20807002 PREDICTED: putative disease resistance protein RGA4
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/G 20803710 missense_variant p.Arg979Ser
G/T 20803729 stop_gained p.Ser973*
G/C 20803850 missense_variant p.Arg933Gly
T/G 20803892 synonymous_variant p.Arg919Arg
T/A 20804064 synonymous_variant p.Gly861Gly
A/G 20804072 missense_variant p.Tyr859His
C/G 20804150 missense_variant p.Asp833His
G/C 20804161 missense_variant p.Pro829Arg
T/C 20804204 missense_variant p.Ile815Val
T/A 20804264 stop_gained p.Arg795*
T/C 20804454 stop_retained_variant p.Ter731Ter
G/C 20804492 missense_variant p.Leu719Val
C/*,T 20804571 stop_retained_variant p.Ter692Ter
G/T 20804576 missense_variant p.Leu691Ile
T/G 20804674 missense_variant p.Lys658Thr
A/G 20804681 missense_variant p.Ser656Pro
A/C 20804716 missense_variant p.Leu644Trp
T/C 20804819 missense_variant p.Lys610Glu
T/C 20804854 stop_retained_variant p.Ter598Ter
C/G 20804890 missense_variant p.Arg586Thr
G/T 20804929 missense_variant p.Pro573His
C/A 20804951 missense_variant p.Val566Leu
A/C 20804974 missense_variant p.Phe558Cys
G/C 20805034 missense_variant p.Thr538Arg
T/C 20805119 intron_variant
T/G 20805122 intron_variant
G/A 20805218 intron_variant
T/A 20805392 intron_variant
A/C 20805511 missense_variant p.Ser498Ala
A/G 20805533 synonymous_variant p.Asp490Asp
T/G 20805559 synonymous_variant p.Arg482Arg
C/G 20805608 missense_variant p.Glu465Asp
C/A 20805690 missense_variant p.Gly438Val
G/A 20805913 synonymous_variant p.Leu364Leu
C/T 20806069 missense_variant p.Val312Ile
C/T 20806226 synonymous_variant p.Gln259Gln
G/T 20806305 missense_variant p.Thr233Asn
T/A 20806316 synonymous_variant p.Val229Val
C/G 20806409 synonymous_variant p.Leu198Leu
A/G 20806490 synonymous_variant p.Phe171Phe
C/T 20806501 missense_variant p.Val168Met
T/C 20806626 missense_variant p.Glu126Gly
C/T 20806654 missense_variant p.Glu117Lys
C/T 20806663 missense_variant p.Ala114Thr
T/A 20806715 missense_variant p.Lys96Asn
C/G 20806742 missense_variant p.Glu87Asp
C/T 20806763 synonymous_variant p.Glu80Glu
A/G 20806799 synonymous_variant p.Val68Val
T/G 20806829 synonymous_variant p.Pro58Pro
G/A 20806844 synonymous_variant p.Ser53Ser
G/A 20806910 synonymous_variant p.Asn31Asn

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_35346.1
MDMVILSEAISYTLQCATTFLSPPATRLSSNDIQQFEDNLKRILHIVQKAMHSNIQDPSVLSIWLKNVKDVVNDLNDFMEDHRHNKETAATISLIKVGQNMAHRHKFKHQIKDATEELKRLSNEAENLVISEEARQNERKLTRKSEELEYVEVVVRENVKKDIIDQLVKMFVNSNVVSVPVVTIVGVAGIGKTKLARLVYGDEQVKGLFASRIWVNLETFNVESIATRVIETTNKGKRFLLVLDDLRVENGEGCLQKLQDRLAEAGVGGAVVVTTRSNFVAKKISEIGTVKLKPHVLQELNEEESWSLFQKVHGPGSGKINEDVGRRVVREYCGGVPMKIIAIARLLEDLDSPVPEIELKKKFLREIRFTYYDELSPQQKLCFAYCSLFPQEQEIDAGRLIRLWMAEGFLWRNLYSDPQEFGLACFNDFVPFVFQEMGSDEFGVVKRYKMNRLMHELARTVAWDENIIVDSAEVEVQERVVRSSFHFALDVQCGIPKSLFENAKKLRSILLLGKTNKSRLPHEVKMTISTLGGLRELTHLDGLRGHLEILHLEQLNFSSPLEAKDKYLRDKKHLHCLTLRWDHEEKEEEDEKKRNVIAKKDKESLECLDPNPNLAVLSVVGYYGKTFSNWLSSIKCLVKFSLNDCYNCQYLPALDHLQNLRVLELRRLDSLEYVSKNSDQISADTEASSSSSSTPFFPSLKELTISDCPKLRSWWETANWKPNRPFFTRISKLDVQCCPELHCMPLYPYLDEELVVVDSSVKSMRDTVHASISADFLPFSKLKTMLISRITQTPPERWLKNFISLQTLQIRDCSKLLYLPQGFKSLSSLQSLTIERCAELDLDRSKTEWEGLKRLRFLIIKEIPKLKSLPWGVEDVTSLEELELHECPALLNLPETIANLTSLTKLVICKCGELDSLPKGIGKIESLHTLAITDCPLLTPRCQPETGDDWPQIGNIRNIILKQSSQDLRDLWSHGRIGKGRYF*


CDS Sequence:
>Vu_35346.1
ATGGACATGGTTATTCTCTCCGAAGCCATATCCTACACCCTTCAATGCGCCACCACCTTCCTATCACCCCCAGCAACTCGTCTCTCCTCAAACGACATTCAACAATTTGAAGACAATCTCAAAAGGATACTCCACATTGTTCAGAAGGCCATGCACAGCAACATCCAAGACCCATCGGTTCTTTCAATTTGGTTAAAAAATGTTAAAGACGTGGTCAACGATTTGAACGATTTCATGGAGGATCATCGTCACAACAAGGAGACCGCTGCCACAATATCTCTAATCAAAGTCGGCCAAAACATGGCACATCGCCACAAATTCAAGCACCAAATCAAAGACGCCACTGAGGAGCTCAAACGCCTCTCAAACGAGGCAGAAAACTTGGTCATCTCTGAAGAAGCTAGGCAGAATGAAAGAAAGTTGACTCGTAAAAGTGAGGAATTAGAGTATGTTGAAGTGGTTGTTAGAGAAAATGTGAAGAAGGATATTATAGATCAACTCGTGAAGATGTTTGTGAACAGCAATGTTGTTTCTGTTCCTGTGGTTACCATTGTTGGGGTTGCGGGAATAGGGAAGACTAAACTTGCTCGTCTGGTTTATGGGGATGAGCAAGTCAAAGGTCTCTTTGCATCACGGATATGGGTAAACCTTGAAACATTCAACGTGGAGTCCATTGCTACACGTGTAATCGAAACAACTAACAAGGGTAAACGCTTTCTTCTTGTGCTTGATGATTTGAGAGTCGAGAACGGTGAGGGATGTCTCCAGAAGCTGCAGGACAGGTTAGCGGAGGCTGGAGTTGGTGGGGCGGTGGTTGTAACTACACGTAGCAATTTTGTTGCAAAGAAGATTTCTGAAATTGGCACGGTTAAACTTAAACCCCATGTTTTGCAAGAGCTTAACGAAGAGGAATCGTGGTCTCTGTTTCAGAAAGTTCATGGACCGGGTTCCGGAAAAATAAACGAAGATGTGGGACGGAGGGTAGTGAGGGAATATTGTGGAGGAGTCCCTATGAAGATAATAGCCATAGCAAGGTTGTTAGAAGATCTTGATTCACCAGTTCCAGAAATTGAGTTGAAGAAGAAGTTTCTGCGAGAGATAAGGTTTACTTATTATGACGAACTTTCCCCGCAACAAAAGCTATGTTTTGCTTATTGTTCGTTGTTTCCTCAAGAACAAGAGATAGACGCTGGGAGATTGATTCGTCTCTGGATGGCAGAAGGATTTCTCTGGCGGAACCTATATTCCGATCCACAAGAATTTGGCTTAGCGTGTTTCAACGACTTTGTTCCTTTTGTTTTCCAGGAAATGGGGAGTGACGAGTTTGGTGTTGTGAAGCGGTACAAGATGAACCGTTTAATGCATGAACTGGCAAGGACTGTGGCCTGGGATGAGAATATCATAGTGGACTCGGCAGAGGTTGAAGTTCAGGAGAGAGTGGTGAGATCCTCGTTTCATTTTGCGTTGGATGTTCAGTGTGGAATCCCAAAGTCTTTGTTCGAGAATGCGAAGAAACTGAGGAGCATTCTCTTGCTGGGGAAGACTAACAAATCGAGGCTTCCACACGAGGTGAAGATGACCATATCAACTTTGGGAGGTCTAAGGGAACTCACACATCTTGATGGCCTCAGAGGACACTTGGAAATTTTGCATCTGGAGCAATTGAATTTTTCTTCACCATTGGAAGCCAAAGACAAGTATTTGAGAGATAAAAAGCACCTTCATTGTTTGACTTTAAGATGGGATCATGAGGAGAAAGAGGAGGAAGATGAGAAGAAAAGGAATGTCATTGCTAAAAAAGACAAGGAATCACTGGAATGTCTTGATCCAAATCCAAATCTGGCAGTGTTATCCGTAGTTGGGTATTACGGTAAAACGTTTTCTAATTGGCTTTCTTCGATTAAATGCCTTGTTAAGTTTAGCCTAAATGATTGTTACAATTGCCAATATCTCCCAGCACTGGATCATCTCCAAAACCTCAGGGTTCTCGAGCTAAGGAGATTGGACTCCCTTGAATACGTTTCAAAAAACAGTGACCAAATCAGTGCTGACACTGAAGCCTCATCTTCCTCCTCTAGTACACCATTTTTTCCATCGTTAAAGGAACTCACAATCTCTGATTGCCCGAAACTCCGAAGCTGGTGGGAAACTGCCAACTGGAAACCCAACAGACCATTCTTTACTCGCATTTCTAAACTTGACGTACAATGCTGCCCTGAGTTGCATTGCATGCCTTTGTACCCTTATCTGGATGAAGAGTTAGTGGTTGTGGATTCAAGTGTAAAGTCAATGAGGGATACAGTGCATGCTAGTATTTCAGCGGACTTCCTTCCTTTTTCCAAATTGAAGACCATGCTAATATCGCGTATTACACAAACTCCACCAGAGAGATGGCTTAAAAACTTCATTTCCCTTCAGACCCTTCAAATTCGTGATTGCTCTAAATTACTGTATCTACCACAAGGTTTCAAGTCTTTGAGCTCACTCCAGAGTCTTACGATTGAGAGATGTGCGGAACTTGATCTTGACAGATCAAAGACTGAATGGGAGGGTCTGAAACGTCTACGTTTTCTGATTATAAAGGAAATTCCGAAGCTCAAATCCCTTCCATGGGGTGTTGAGGATGTTACCTCTTTGGAAGAGCTCGAGCTTCATGAATGCCCTGCCTTGCTTAATCTACCCGAAACCATAGCCAACCTCACTTCGCTTACAAAACTAGTGATTTGTAAATGTGGAGAGTTGGATTCGCTGCCAAAAGGAATAGGAAAGATCGAGTCTTTACATACCTTGGCCATTACCGACTGTCCTCTGTTAACACCAAGGTGTCAACCTGAAACAGGGGATGATTGGCCACAAATTGGTAATATCAGAAATATCATTCTGAAGCAAAGTTCTCAAGACTTGAGGGACTTATGGAGTCATGGAAGAATTGGTAAAGGAAGATATTTCTAA


Promoter Sequence:
>Vu_35346::LG10:20807002-20809002(-)
ATTAATAACATTAATCTTTTAAGTTGCGATAAAATTAGGAGGGAAATGTTTATGAAAATTATATTTTACAATTCAGTTTTAAAAATTAAATAAGATTTTTCAAAATCTAATAAAATAAGAATATTATGTTAATGAAAAGTGATACAATAAAACATTTAAAAATTTTCAGTTAAGATTACCTTAAAATTATTACAAAGAGTTTTAATATATATTTTTTTAATTCAATACTATGTTAAAAAATTAAAGTTTAAACCTAATTCAATTTCTTAACTCAATTTTTTAATTTAATTTTACAATATCAATTTTTTAAATGAATTTATATTCAATATATATTATTGTTGGAAGTATTTTTTTAATATAATATAAAAATCACAAATTAAAGATAGATTTACAATTTAGTTCTTAATCATTATATAAAATTATATTATTTTTTATTAATATGAAATCTACCCGTTTACTCTTTTATTTAATATTCAATTTTCTATATTTTATCTTTTTTCTTCTCTCTTATTTCTTTATTGAATTTCTTCTAAAAAAAAAAGAAGAACTTCAACATCATTATACCATTTGCTTGTGTCTTTTCCAGTGACATGACCCTTTACTTTCCTAGGAATTTTCACTACTAAAAAAAGAGGAACTATGATCCATATTTGACGGGTCAAGTCAATTAAAAATATGTATAAAAATAGCACAGACTTATCTTCTATTGACTAATCCTTTCTATAGTCTGGGAAACAACCGGCAAATGTGAAAACTTTTCTTAATTCAAGTGCAAACACATGTTTGTTTGATTTAGTTGGTCTTCATATTTTTATTTCGTATTAAAAAATTATTATTAGAACAAAAATGACAGTTAATAATATGATAGCTTTGTGTATATATCTTTTTTTACATAGTCCAGTTTAATTGATTAAAAATAGAAAACAAAAATCAATCTGTTTTTGTATTATATCGTATTTTACCATAAATATTTTGGGTATAATACTTCTTTTTTACAATAGAATATAGTTTTTTTTATTCATCCCATGGTTTGATGTTAATCTTTATCTCCTTAACCTATGTTTTGTGGGTGGAGGAGTGTGTCTCTTGCCTTGGATTCCCTTCAGAGAGCATTTTTTAAAAGTTTTTTAATTATGTGCAGTAAAATATCAATTAAATGAATCTTGACCTAACTAACACAGGAAACAAACACTATTAACAATTTATTACTGTAATGTACTAGATTAGTGTGAATACTTTTACTCTGGACCACATTAGTGTGAACACTGAGCACAACATTCATGCTTGCTTTAATATAAAATAAATTAAATATATGTCTGCGTGTTTGGTAAGGTTAATAAATTTAGTAGCAATGTGAATCTTTAATTAGCGCAGGAAGTAGTACAACAAATTATCAAATGCTTCTTTTATTGGATTTCGTTGAAACATTTTTTATCCATATATATTTATATGAACACTGACACACTCGTTTATGCATGTTAACATGAATTAAACTACAATATATATGAATTCAAAGCATAATGTACGTAATTAAAATAAGATTATTCATCAAACACTCACGTAAATTGTGAAATCTTAGTAGATTTGCTTTTAACCTTAACTTATGTAAACAAGTATAATATAGTAATAATTATAATACTAAATATATTTAAATAATAATAAAATAATAAATAATATTAAACATATTTGAATAATACGGTTGTATGAAAAATAAAAAAAGAAAATGAATTTTTAACTACTTATTTTTTACAACTTTTTTATAATAATATAATTTATGTGATAGTTTTTTATTTATCTGTTTCAAATATATAAATGGTTAAAATGTTACTAAAAAAGTGTTAAAATATAATGTTACATAAAAAGAATAAAAAAAACACGATAATACATTCTCTTAATGTATTATCAATGTCTTATTGAGTCTGCTATTCTCGTCAACACAACACTTTCTGTTATTCTGCCTTGTTCCAAACCAACATTTTTCATCCACCTTAGTTGAATCA


Gene Sequence:
>Vu_35346(-)
ATGGACATGGTTATTCTCTCCGAAGCCATATCCTACACCCTTCAATGCGCCACCACCTTCCTATCACCCCCAGCAACTCGTCTCTCCTCAAACGACATTCAACAATTTGAAGACAATCTCAAAAGGATACTCCACATTGTTCAGAAGGCCATGCACAGCAACATCCAAGACCCATCGGTTCTTTCAATTTGGTTAAAAAATGTTAAAGACGTGGTCAACGATTTGAACGATTTCATGGAGGATCATCGTCACAACAAGGAGACCGCTGCCACAATATCTCTAATCAAAGTCGGCCAAAACATGGCACATCGCCACAAATTCAAGCACCAAATCAAAGACGCCACTGAGGAGCTCAAACGCCTCTCAAACGAGGCAGAAAACTTGGTCATCTCTGAAGAAGCTAGGCAGAATGAAAGAAAGTTGACTCGTAAAAGTGAGGAATTAGAGTATGTTGAAGTGGTTGTTAGAGAAAATGTGAAGAAGGATATTATAGATCAACTCGTGAAGATGTTTGTGAACAGCAATGTTGTTTCTGTTCCTGTGGTTACCATTGTTGGGGTTGCGGGAATAGGGAAGACTAAACTTGCTCGTCTGGTTTATGGGGATGAGCAAGTCAAAGGTCTCTTTGCATCACGGATATGGGTAAACCTTGAAACATTCAACGTGGAGTCCATTGCTACACGTGTAATCGAAACAACTAACAAGGGTAAACGCTTTCTTCTTGTGCTTGATGATTTGAGAGTCGAGAACGGTGAGGGATGTCTCCAGAAGCTGCAGGACAGGTTAGCGGAGGCTGGAGTTGGTGGGGCGGTGGTTGTAACTACACGTAGCAATTTTGTTGCAAAGAAGATTTCTGAAATTGGCACGGTTAAACTTAAACCCCATGTTTTGCAAGAGCTTAACGAAGAGGAATCGTGGTCTCTGTTTCAGAAAGTTCATGGACCGGGTTCCGGAAAAATAAACGAAGATGTGGGACGGAGGGTAGTGAGGGAATATTGTGGAGGAGTCCCTATGAAGATAATAGCCATAGCAAGGTTGTTAGAAGATCTTGATTCACCAGTTCCAGAAATTGAGTTGAAGAAGAAGTTTCTGCGAGAGATAAGGTTTACTTATTATGACGAACTTTCCCCGCAACAAAAGCTATGTTTTGCTTATTGTTCGTTGTTTCCTCAAGAACAAGAGATAGACGCTGGGAGATTGATTCGTCTCTGGATGGCAGAAGGATTTCTCTGGCGGAACCTATATTCCGATCCACAAGAATTTGGCTTAGCGTGTTTCAACGACTTTGTTCCTTTTGTTTTCCAGGAAATGGGGAGTGACGAGTTTGGTGTTGTGAAGCGGTACAAGATGAACCGTTTAATGCATGAACTGGCAAGGACTGTGGCCTGGGATGAGAATATCATAGTGGACTCGGCAGAGGTTGAAGTTCAGGAGAGAGTGGTGAGATCCTCGTTTCATTTTGCGTTGGATGTTCAGTGTGGAATCCCAAAGTCTTTGTTCGAGAATGCGAAGAAACTGAGGAGCATTCTCTTGCTGGGGAAGACTAACAAATCGAGGCTTCCACACGAGGTGAAGATGACCATATCAACTTGTGAAAAGATCTTGGAAACATTCAAGTGTTTGCGAGTGCTGGATTTCCATGACTTGGGGATCAAGATGGTTCCGAGCTCTATTGGGGAACTGAAGTACTTGAGGCTTCTCGACCTATCCCATAACAACATTAAGAAGCTTCCCAGTTCAATCACCAAGCTTTTCCACTTGCAAACATTGAAACTTTCCCAATGCCATGTGCTCGAAGAACTGCCAAAAGACTTGGAGAATCTGAGTTCCCTCATCCATCTTTACTTAGAGGGGTGCCTTGATCTCACTCAGATGCCTCGAGGAATAGGTAAGCTGAGTTCTCTGCAGACATTGTCACTTTTTGTGGTTGGCAAGAACTACCAAGTGGGAGGTCTAAGGGAACTCACACATCTTGATGGCCTCAGAGGACACTTGGAAATTTTGCATCTGGAGCAATTGAATTTTTCTTCACCATTGGAAGCCAAAGACAAGTATTTGAGAGATAAAAAGCACCTTCATTGTTTGACTTTAAGATGGGATCATGAGGAGAAAGAGGAGGAAGATGAGAAGAAAAGGAATGTCATTGCTAAAAAAGACAAGGAATCACTGGAATGTCTTGATCCAAATCCAAATCTGGCAGTGTTATCCGTAGTTGGGTATTACGGTAAAACGTTTTCTAATTGGCTTTCTTCGATTAAATGCCTTGTTAAGTTTAGCCTAAATGATTGTTACAATTGCCAATATCTCCCAGCACTGGATCATCTCCAAAACCTCAGGGTTCTCGAGCTAAGGAGATTGGACTCCCTTGAATACGTTTCAAAAAACAGTGACCAAATCAGTGCTGACACTGAAGCCTCATCTTCCTCCTCTAGTACACCATTTTTTCCATCGTTAAAGGAACTCACAATCTCTGATTGCCCGAAACTCCGAAGCTGGTGGGAAACTGCCAACTGGAAACCCAACAGACCATTCTTTACTCGCATTTCTAAACTTGACGTACAATGCTGCCCTGAGTTGCATTGCATGCCTTTGTACCCTTATCTGGATGAAGAGTTAGTGGTTGTGGATTCAAGTGTAAAGTCAATGAGGGATACAGTGCATGCTAGTATTTCAGCGGACTTCCTTCCTTTTTCCAAATTGAAGACCATGCTAATATCGCGTATTACACAAACTCCACCAGAGAGATGGCTTAAAAACTTCATTTCCCTTCAGACCCTTCAAATTCGTGATTGCTCTAAATTACTGTATCTACCACAAGGTTTCAAGTCTTTGAGCTCACTCCAGAGTCTTACGATTGAGAGATGTGCGGAACTTGATCTTGACAGATCAAAGACTGAATGGGAGGGTCTGAAACGTCTACGTTTTCTGATTATAAAGGAAATTCCGAAGCTCAAATCCCTTCCATGGGGTGTTGAGGATGTTACCTCTTTGGAAGAGCTCGAGCTTCATGAATGCCCTGCCTTGCTTAATCTACCCGAAACCATAGCCAACCTCACTTCGCTTACAAAACTAGTGATTTGTAAATGTGGAGAGTTGGATTCGCTGCCAAAAGGAATAGGAAAGATCGAGTCTTTACATACCTTGGCCATTACCGACTGTCCTCTGTTAACACCAAGGTGTCAACCTGAAACAGGGGATGATTGGCCACAAATTGGTAATATCAGAAATATCATTCTGAAGCAAAGTTCTCAAGACTTGAGGGACTTATGGAGTCATGGAAGAATTGGTAAAGGAAGATATTTCTAA