Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_35318 LG10 20458451 20461929 PREDICTED: disease resistance protein RPM1-like
Map

Annotations  
category   relationship type   keyword
Pathway   B 09159 Environmental adaptation   C 04626 Plant-pathogen interaction [PATH:ko04626]
SNP Position Effect Amino acid change
G/A 20458742 missense_variant p.Arg46Lys
G/T 20458768 missense_variant p.Asp55Tyr
A/T 20458937 missense_variant p.Lys111Ile
A/T 20458946 missense_variant p.Asn114Ile
T/C 20459121 downstream_gene_variant
C/A 20459125 downstream_gene_variant
A/G 20459181 downstream_gene_variant
C/A 20459288 synonymous_variant p.Ile173Ile
G/T 20459579 missense_variant p.Arg270Ser
A/G 20459709 missense_variant p.Thr314Ala
A/G 20459729 synonymous_variant p.Lys320Lys
A/C 20459737 missense_variant p.Asn323Thr
A/G 20459783 synonymous_variant p.Arg338Arg
G/A 20459795 synonymous_variant p.Gln342Gln
G/A 20459796 missense_variant p.Gly343Ser
C/A 20459810 synonymous_variant p.Pro347Pro
G/C 20459926 missense_variant p.Trp386Ser
T/C 20459946 missense_variant p.Phe393Leu
C/T 20459969 synonymous_variant p.Asn400Asn
G/C 20460068 missense_variant p.Gln433His
T/G 20460074 stop_gained p.Tyr435*
A/T 20460209 synonymous_variant p.Ala480Ala
A/G 20460383 synonymous_variant p.Gln538Gln
A/G 20460857 synonymous_variant p.Glu696Glu
G/A 20460879 missense_variant p.Gly704Arg
A/G 20460960 missense_variant p.Ile731Val
A/G 20460998 synonymous_variant p.Thr743Thr
G/A 20461010 synonymous_variant p.Ser747Ser
A/G 20461028 synonymous_variant p.Gln753Gln
T/C 20461144 missense_variant p.Leu792Pro
A/T 20461145 synonymous_variant p.Leu792Leu
G/A 20461205 synonymous_variant p.Leu812Leu
G/A 20461214 synonymous_variant p.Arg815Arg
A/G 20461269 missense_variant p.Lys834Glu
G/A,C 20461274 missense_variant p.Glu835Asp
T/C 20461276 missense_variant p.Val836Ala
G/C 20461277 synonymous_variant p.Val836Val
A/T 20461280 synonymous_variant p.Thr837Thr
T/C 20461319 synonymous_variant p.Ser850Ser
T/C 20461331 synonymous_variant p.Cys854Cys
T/A 20461336 stop_gained p.Leu856*
A/G 20461370 synonymous_variant p.Leu867Leu
A/G 20461427 missense_variant p.Ile886Met
C/T 20461457 synonymous_variant p.Cys896Cys
T/C 20461524 synonymous_variant p.Leu919Leu
C/A 20461549 missense_variant p.Ser927Tyr
T/C 20461580 synonymous_variant p.His937His
C/G 20461640 3_prime_UTR_variant
A/T 20461647 3_prime_UTR_variant
G/A 20461652 3_prime_UTR_variant
T/G 20461671 3_prime_UTR_variant
C/T 20461677 3_prime_UTR_variant
C/A 20461690 3_prime_UTR_variant
A/C 20461697 3_prime_UTR_variant
T/C 20461704 3_prime_UTR_variant
G/A 20461708 3_prime_UTR_variant
C/A 20461719 3_prime_UTR_variant
C/A 20461725 3_prime_UTR_variant
A/G 20461745 3_prime_UTR_variant
C/T 20461770 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_35318.1
MAESAVRFLLKRLTPVFENKVKLFTGVQAEVIYLKGQLELIRAFLRVADALEESDEELKVWVKQVRDVVHEAEDLLDELELVQVHNLTNGFSIYLRIRNMKARYRIAHELKSINSRLKAISSSRKRFLSKLDSSSVASSSINTGNAWHDQRGDALLLDNTDLVGIDRPKKKVIGWLINGCPGRKVISVTGMGGIGKTTLVKKVYDDPDVKKHFKACAWVTVSQSCKIEELLKDLAKKLFSEIRRPIPEGMESMCSDKLKMIIKDLLQKKRYLVVFDDVWHMYEWEAVKYALPNNNCSSRIMITTRRSDLAFTSTIESNGKVYNLQPLKQDEAWDLFCRNTFQGDSCPSYLIDICKYILRKCEGLPLAIVAISGVLATKDKRRIDEWGMICHSFGAEIQGNGKLDNFKTVLNLSFNDLPYHLKYCFLYLSIFPQDYLIQRMRLIRLWIAEGFIEAKEGKTKEDVAHDYLKELLNRNLIQVAGTTTDGRVKTLRVHDLLREIIILKSKDQNFASIVKEQSAAWPEKIRRLSVHGTLPYRQQHRSVSQLRSFLMFGVGEYVPLGKLFPSGFKLLSVLDYQDAPLKKFPLAVIDLYHLRYLSLRNTKVKTVPGHIIGKLHNLETFDLKKTSVRELPVDILKLQKLRHLLVYQLKFKGYAQFHSKDGLKAPSEIGKLKSLQKLCFVEANQDCGMIIRQLGELSQLRRLGILKLREEDGMAFCLSIERLTNLHALSIASEGESKVIDLTFLCSPPPFLQRLYLSGRLQELPSWIQSLHSLARLFLKWSCLRYDPLVYLQDLPNLAHLELLKVYDGDTLHFRSGKFKKLKVLGLDKFDGLKEVTVGKDAMNCLEKLSIGRCELLKKVPSGIENLTKLKVLEFFDMPDELMKTICPHGPGKDYCKVLHIPDVYSTYWRDGGWDVYALDTFSRDCSPRSGTLIRSHEPRIQWKV*


CDS Sequence:
>Vu_35318.1
ATGGCTGAGAGTGCAGTGCGTTTTCTTCTCAAAAGGCTTACACCTGTTTTTGAGAATAAGGTGAAATTGTTCACTGGAGTTCAAGCAGAAGTGATATACCTGAAAGGACAGTTGGAGCTAATAAGAGCCTTCTTAAGGGTTGCAGATGCGTTAGAAGAGAGCGACGAGGAACTTAAAGTTTGGGTTAAGCAAGTCAGAGATGTTGTTCATGAGGCCGAAGATCTTCTTGATGAATTGGAACTTGTCCAGGTACATAACCTAACCAATGGATTCTCTATTTATCTCCGTATCAGGAATATGAAAGCTCGCTATCGGATTGCACATGAGTTAAAAAGCATCAACTCCCGCTTGAAAGCTATTTCTTCAAGTCGTAAGAGATTCCTCAGTAAACTGGACTCTTCTTCAGTGGCTTCAAGTTCCATTAATACAGGTAACGCATGGCACGATCAACGAGGAGATGCTCTTCTCCTGGACAACACTGATCTAGTGGGCATAGACAGGCCAAAAAAAAAGGTTATCGGATGGTTGATCAATGGTTGTCCTGGACGAAAAGTTATTTCTGTTACTGGAATGGGAGGGATAGGAAAAACTACTTTGGTGAAGAAAGTATATGATGATCCAGACGTAAAAAAACACTTCAAAGCTTGTGCTTGGGTGACTGTTTCTCAATCTTGTAAAATTGAAGAGCTTCTCAAAGACTTGGCCAAGAAGCTCTTTTCTGAGATAAGGCGACCAATTCCAGAGGGAATGGAAAGCATGTGTAGTGATAAGCTCAAAATGATAATCAAAGACTTGCTGCAGAAGAAGAGGTATCTAGTAGTATTTGATGATGTGTGGCATATGTATGAATGGGAAGCTGTCAAATATGCATTGCCAAACAACAATTGTAGTAGCAGGATCATGATCACCACTCGTAGATCTGATTTAGCCTTTACCTCCACAATAGAATCCAACGGTAAAGTGTATAACTTGCAACCCTTGAAACAAGATGAGGCTTGGGATCTATTTTGTAGAAACACCTTTCAGGGTGATTCATGTCCCTCATATTTGATTGACATCTGTAAATATATCTTAAGAAAATGTGAGGGTCTTCCCCTTGCAATTGTAGCAATCAGTGGTGTCCTGGCCACAAAAGACAAGCGCAGGATTGATGAGTGGGGTATGATTTGCCATAGTTTTGGAGCTGAAATTCAAGGCAACGGCAAACTTGATAATTTTAAAACTGTACTCAACCTCAGTTTTAATGATTTACCTTACCATTTGAAATACTGTTTCTTGTACTTAAGCATCTTTCCTCAGGACTATCTGATTCAGCGCATGAGATTGATTCGCTTATGGATAGCAGAAGGATTTATTGAAGCCAAAGAAGGAAAAACAAAGGAAGATGTTGCACATGATTACCTGAAGGAGCTCCTGAACAGAAACTTAATACAAGTAGCAGGTACAACAACTGATGGAAGGGTCAAAACTTTGCGAGTCCATGATCTTCTACGGGAGATCATCATTTTGAAGTCTAAAGACCAAAACTTTGCATCCATTGTCAAAGAACAAAGTGCTGCATGGCCAGAAAAGATTCGACGGCTTTCAGTGCACGGCACATTACCATATCGGCAACAACATAGGTCTGTCTCTCAACTCCGTTCTTTTTTAATGTTTGGGGTTGGAGAATATGTACCCCTTGGAAAACTGTTCCCAAGTGGTTTTAAACTGCTTAGTGTTTTAGATTATCAAGATGCACCTTTGAAGAAGTTTCCACTAGCAGTTATTGATCTATATCATTTAAGATATCTAAGTTTAAGGAACACAAAGGTGAAAACAGTTCCAGGTCACATAATAGGGAAGTTGCATAATCTAGAAACATTCGATCTAAAGAAGACTTCTGTCAGAGAATTGCCTGTAGATATTCTCAAGCTTCAAAAGCTTCGTCATCTCCTTGTCTATCAGTTGAAATTCAAAGGTTATGCACAGTTTCACTCCAAAGATGGTCTTAAGGCTCCCTCTGAAATAGGGAAATTAAAGTCACTACAAAAGCTTTGTTTTGTGGAGGCAAACCAAGACTGTGGAATGATAATAAGGCAGTTAGGGGAACTAAGTCAACTAAGAAGGTTGGGAATCTTGAAACTTAGAGAGGAAGATGGGATGGCTTTCTGTTTGTCCATTGAGAGATTAACTAATCTTCATGCCCTCTCTATTGCTTCTGAGGGTGAGAGTAAAGTCATTGATCTGACATTTCTCTGTTCGCCACCTCCATTTCTTCAACGCTTGTATTTGTCAGGGCGTCTACAAGAGTTACCAAGTTGGATACAGTCTCTTCATAGCCTAGCCAGGTTATTTCTGAAATGGAGCTGTTTAAGATACGATCCTCTAGTGTATCTACAAGATCTTCCAAACCTTGCACATCTTGAACTACTTAAGGTTTATGATGGTGACACTTTGCATTTTAGGAGTGGAAAGTTCAAGAAGCTCAAGGTTTTAGGTCTTGACAAATTTGACGGACTCAAAGAGGTGACAGTGGGGAAGGATGCCATGAACTGCCTAGAAAAACTGAGTATAGGGCGGTGTGAATTGTTGAAGAAGGTTCCATCAGGCATTGAGAATTTAACTAAGTTGAAAGTCCTTGAGTTTTTCGATATGCCAGATGAACTGATGAAGACAATATGTCCACATGGTCCCGGAAAAGATTACTGCAAAGTTTTACATATTCCAGATGTCTATTCTACCTACTGGAGAGATGGAGGTTGGGATGTTTATGCTTTGGACACTTTCAGCAGAGATTGTTCTCCTAGATCAGGCACTCTCATAAGAAGTCATGAACCTCGTATTCAGTGGAAGGTGTAG


Promoter Sequence:
>Vu_35318::LG10:20456451-20458451(+)
ACAGAGTACACAGAGAAGAAGAATAGCCACAAGGTCGAAACCTTCGAATATGTACTGGCAAAGCGTTGGTCAAATTTGAAATGTTCGTCATTTTGCAGAAAATATCAAATTAAAGTGTGTTGTTCTATCCAATTTGATTTACCCCCAAGATCAGCAAGGTTAATGATTACAATGTGGAAGCTATGTGGAATTATTTTAATTTGAATAACATGCATTTACAACAAAGGATCTCCTTTCTTTTGCGTGAAACTTTCTTTTGAAAAAGCTCGAAGGGTGCTACCAATTATGACAGAGTTTAGAATAACATTGAAAGCACCACTTCCTTGAAATTTTCCTACATTCAGAACTTGTGGACATATTCTTCATGTTAGGAAGACAAAGAACGACGACATTAGAAAGTGGCTACACGAGCTTCCCACAGGGGACACCAATGTAAAGGATTAGGATAGCACGTGGTCTCGCGTACCGACACAGATCTTCAATTTTGGGTTGCAACACGACCGAGACCCGAATGGAGGCATGAAGGCAGACGTGTACTGCTTTGGGGCGGCGTTGATGGAGCTCCTAACGGGGAAGGAAAGCACGGCGGAAAGGTGGCAACGGGTGAAGGAGGGGCAGAGTGTTAGGATTCTAAACAAGAGACTCCTATTCAATGTTGTTGGGCTGAAATTTCCAGAATCTTCCTTTTTTTTTTTACTTTACTAAATTTCACGTCGTAATTTAATTATTTCCATGTAATAAAATGATCCACTTCAGCATATTTATTATGCACCACGTCATCACATTTTAACAGTCGTTTCTGACCACTTAATTGAAAGTGTTTAATTATTACGATTTTACAAAATTTAGGACTTAATTGAGACTGTTTTCAACAAGAGAACCCACTTGAGATTCCTGAACAAATATGAGGTCCAACCAAGGGCTTAAACTTATATGTTAAATCAATAATTCCTTAATTAATCCAACATATCCTTTGCATTATGAGTTATGAGCTAGGGTTTAAAGCTATAGTTTACGGTTTATGGTTTATGATTTATGATCAGGATTTGGGTTTAGGATTTAGGGTTAAGGTTAAGGCTTAATGCTAGGGTTTAAGGGTTAGTGTTAGGGTTTTGTGTTAAGGCTAGGGTTCATGGGGTTTAGGGTTTAGAATTTAAGATTTAGGGTTTAGGATTTATGATTTACTAATAAGTATGTAAAAAATTTATTTTGGAAGAGATTAGTTTGGTTGAATGTAAGTTTGAAGTCTCACATCAACTAAAAATGAGTAAAATGACTAGTATAGAGTCTCATACACTTATTGGAAGGATGGTAGGGATCCAATGATAATACGAAGTCTCACATCAATTAAAAATGAGAAATTAAGGTAATGGTTTAGGATTTAAGGTTAGGATTTAGGGTTAGAGTTTAGGATTAAGGTTTAGGATGAGGGTTTAAAATTTAGAGTTAAGGTTAGGGTTTAGGCATTTTGATTAAAATTGTCCCGAAAGCTCGGAATCACTGGCAGGGGATTTAAACTAACCGTGGTTAGCTAAAATCTTCTTGATTAAAAGTTTTCCGAAAGCTCATAATCACTGGTAATATTCTTTTTATACTTTTTGGCATATGGAGATGCTTTTATTCCCTTTCAGTACAGCCTAATATAAAAGACAACTGGTCTTTCCTAAATTCAGTTTTTCCAGGAAACCGGAAGAAGGTATCTGGCCTTCAATCAAATTTCTTAAGGCATTAATCAAGCACCCTCTAACCAGTACAACTTGCATGGTGGTAAGGAATATTGTTTTAAAATCCTTGACGCGTTTCTTCTTCAAATAATCAAACTAATTGTAAGTCAGCAATTTTATATATTGATTTTTCTCTTCATATATATTTTAAGATGGCTTTTTAAGCTCCACTTGACATAATCTAAGAGAACTTTTGAGCTTTAATTGCACTTTTCTTTATTTGTTTCATTTTCTGACACGTAAACAGTTATCTACTGGTGATGCTGTCATATTTCA


Gene Sequence:
>Vu_35318(+)
AATTTTTTGTGAGATAAAAAAGTCTTGCATCTCTATCTCATGTATTATCTGTAAATCAAGCATCACTGAGTTGAATAAAGGGAGGCACTTCCTATAGCTAGCAATTTTGAAACCAAGTTTCTTTCCACTAGTTGCTGTAGGAATGTACAGAGTTGATGGCTGAGAGTGCAGTGCGTTTTCTTCTCAAAAGGCTTACACCTGTTTTTGAGAATAAGGTGAAATTGTTCACTGGAGTTCAAGCAGAAGTGATATACCTGAAAGGACAGTTGGAGCTAATAAGAGCCTTCTTAAGGGTTGCAGATGCGTTAGAAGAGAGCGACGAGGAACTTAAAGTTTGGGTTAAGCAAGTCAGAGATGTTGTTCATGAGGCCGAAGATCTTCTTGATGAATTGGAACTTGTCCAGGTACATAACCTAACCAATGGATTCTCTATTTATCTCCGTATCAGGAATATGAAAGCTCGCTATCGGATTGCACATGAGTTAAAAAGCATCAACTCCCGCTTGAAAGCTATTTCTTCAAGTCGTAAGAGATTCCTCAGTAAACTGGACTCTTCTTCAGTGGCTTCAAGTTCCATTAATACAGGTACTACTAATTGGCACAGACTCTATTCAAAGTGATGAATATCCTTAATGGTCATGTCACTCAATTATGAAATTATTTCTCTTCTTTCCCTTTGTTCAAGATAGATCAGTATCAATACATATGTACTTGTTTTGCTGTTTACACTATTACATATCCTGAAACAGGTAACGCATGGCACGATCAACGAGGAGATGCTCTTCTCCTGGACAACACTGATCTAGTGGGCATAGACAGGCCAAAAAAAAAGGTTATCGGATGGTTGATCAATGGTTGTCCTGGACGAAAAGTTATTTCTGTTACTGGAATGGGAGGGATAGGAAAAACTACTTTGGTGAAGAAAGTATATGATGATCCAGACGTAAAAAAACACTTCAAAGCTTGTGCTTGGGTGACTGTTTCTCAATCTTGTAAAATTGAAGAGCTTCTCAAAGACTTGGCCAAGAAGCTCTTTTCTGAGATAAGGCGACCAATTCCAGAGGGAATGGAAAGCATGTGTAGTGATAAGCTCAAAATGATAATCAAAGACTTGCTGCAGAAGAAGAGGTATCTAGTAGTATTTGATGATGTGTGGCATATGTATGAATGGGAAGCTGTCAAATATGCATTGCCAAACAACAATTGTAGTAGCAGGATCATGATCACCACTCGTAGATCTGATTTAGCCTTTACCTCCACAATAGAATCCAACGGTAAAGTGTATAACTTGCAACCCTTGAAACAAGATGAGGCTTGGGATCTATTTTGTAGAAACACCTTTCAGGGTGATTCATGTCCCTCATATTTGATTGACATCTGTAAATATATCTTAAGAAAATGTGAGGGTCTTCCCCTTGCAATTGTAGCAATCAGTGGTGTCCTGGCCACAAAAGACAAGCGCAGGATTGATGAGTGGGGTATGATTTGCCATAGTTTTGGAGCTGAAATTCAAGGCAACGGCAAACTTGATAATTTTAAAACTGTACTCAACCTCAGTTTTAATGATTTACCTTACCATTTGAAATACTGTTTCTTGTACTTAAGCATCTTTCCTCAGGACTATCTGATTCAGCGCATGAGATTGATTCGCTTATGGATAGCAGAAGGATTTATTGAAGCCAAAGAAGGAAAAACAAAGGAAGATGTTGCACATGATTACCTGAAGGAGCTCCTGAACAGAAACTTAATACAAGTAGCAGGTACAACAACTGATGGAAGGGTCAAAACTTTGCGAGTCCATGATCTTCTACGGGAGATCATCATTTTGAAGTCTAAAGACCAAAACTTTGCATCCATTGTCAAAGAACAAAGTGCTGCATGGCCAGAAAAGATTCGACGGCTTTCAGTGCACGGCACATTACCATATCGGCAACAACATAGGTCTGTCTCTCAACTCCGTTCTTTTTTAATGTTTGGGGTTGGAGAATATGTACCCCTTGGAAAACTGTTCCCAAGTGGTTTTAAACTGCTTAGTGTTTTAGATTATCAAGATGCACCTTTGAAGAAGTTTCCACTAGCAGTTATTGATCTATATCATTTAAGATATCTAAGTTTAAGGAACACAAAGGTGAAAACAGTTCCAGGTCACATAATAGGGAAGTTGCATAATCTAGAAACATTCGATCTAAAGAAGACTTCTGTCAGAGAATTGCCTGTAGATATTCTCAAGCTTCAAAAGCTTCGTCATCTCCTTGTCTATCAGTTGAAATTCAAAGGTTATGCACAGTTTCACTCCAAAGATGGTCTTAAGGCTCCCTCTGAAATAGGGAAATTAAAGTCACTACAAAAGCTTTGTTTTGTGGAGGCAAACCAAGACTGTGGAATGATAATAAGGCAGTTAGGGGAACTAAGTCAACTAAGAAGGTTGGGAATCTTGAAACTTAGAGAGGAAGATGGGATGGCTTTCTGTTTGTCCATTGAGAGATTAACTAATCTTCATGCCCTCTCTATTGCTTCTGAGGGTGAGAGTAAAGTCATTGATCTGACATTTCTCTGTTCGCCACCTCCATTTCTTCAACGCTTGTATTTGTCAGGGCGTCTACAAGAGTTACCAAGTTGGATACAGTCTCTTCATAGCCTAGCCAGGTTATTTCTGAAATGGAGCTGTTTAAGATACGATCCTCTAGTGTATCTACAAGATCTTCCAAACCTTGCACATCTTGAACTACTTAAGGTTTATGATGGTGACACTTTGCATTTTAGGAGTGGAAAGTTCAAGAAGCTCAAGGTTTTAGGTCTTGACAAATTTGACGGACTCAAAGAGGTGACAGTGGGGAAGGATGCCATGAACTGCCTAGAAAAACTGAGTATAGGGCGGTGTGAATTGTTGAAGAAGGTTCCATCAGGCATTGAGAATTTAACTAAGTTGAAAGTCCTTGAGTTTTTCGATATGCCAGATGAACTGATGAAGACAATATGTCCACATGGTCCCGGAAAAGATTACTGCAAAGTTTTACATATTCCAGATGTCTATTCTACCTACTGGAGAGATGGAGGTTGGGATGTTTATGCTTTGGACACTTTCAGCAGAGATTGTTCTCCTAGATCAGGCACTCTCATAAGAAGTCATGAACCTCGTATTCAGTGGAAGGTGTAGCTCTAAATTGTGAAATGATTGGTACAATTCTACAGTATGAGTTGGATTTGAATCAGATTGAAATTTCAGCTTAATTGGACAACAACGTTAACAGCATCCAGGGAAGTGTAACAATTTCTTTATATTACCTAAACTGTACTAAAAATTGAGCAGACTCATTTCCTGTATAGAAGTCAGTGCTCAAATAAAGGTGTAGGTTTTTGTTCACCTTTGTTTAAATTTGATCAATGTAAATAAATTGCATAATCACCATTATTGAATACACAAATTGTATAATACAATTCTTCCTATATTACATATTCAGATTCGATTCTATCTTTTC