Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_35280 LG10 19974500 19977992 putative disease resistance protein RGA1
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 19975937 missense_variant p.Gly686Arg
G/A 19976030 synonymous_variant p.Leu655Leu
A/G 19976055 synonymous_variant p.Ile646Ile
G/A 19976208 synonymous_variant p.Asn595Asn
T/A 19976254 missense_variant p.His580Leu
G/A 19976274 synonymous_variant p.Pro573Pro
G/A 19976309 synonymous_variant p.Leu562Leu
G/T 19976360 missense_variant p.Leu545Met
G/T 19976444 missense_variant p.Gln517Lys
C/T 19976460 synonymous_variant p.Glu511Glu
A/G 19976652 synonymous_variant p.Asn447Asn
A/T 19976707 missense_variant p.Phe429Tyr
C/A 19976723 missense_variant p.Ala424Ser
A/T 19976770 stop_gained p.Leu408*
T/A 19976780 missense_variant p.Met405Leu
G/A 19976897 synonymous_variant p.Leu366Leu
A/T 19976956 missense_variant p.Val346Glu
T/A 19976999 missense_variant p.Ser332Cys
C/A 19977240 missense_variant p.Met251Ile
A/T 19977251 missense_variant p.Leu248Ile
A/G 19977382 missense_variant p.Phe204Ser
A/T 19977645 missense_variant p.Asn116Lys
G/A 19977675 synonymous_variant p.Phe106Phe

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_35280.1
MADALLGIVFQDLQSVVQSQLATYWGIDQQAQKLSSNLTAIRAVLRDAERKQIASHAVKDWLQKLTDAAYVLDDILDECSIHSREVLSDDGHTSCLAHAHPKDILFRFHIGKRMKNITQRLHDINEERRMFELRVGVTEKPTVDDGEDYQTTSVITEPIFCGRDEDREKVVKLLLEANNNEDLTIYSIVGMGGLGKTTLAKHVFHDHRVCENFDMRIWVYVSVDFNVKAVLQSIIEYATGQNPNLHTLETMRKKVEEVLQSKRYLLVLDDVWNEDQEKWKHLEGMLRFARGAKGATVLVTTRLEEVASTMETHPAYHLTELSEYDSWSLFKSYAFGPNREEKEELVTIGEDIVKKCVGSPLAIKTLGSLLRDQTAVTQWENIKESEIWNIRSESSSKTDKENSIMRALKLSYFNLELSLRRCFAFCAIFPKGFEIVKEELIHLWMANGFIKSEGNVEVEDVANNVWRKLYRRSFFQEAKSDKFGMITSCKIHDLFYDLAKSIMGEECVMVEEGRLTQLSTRVHHLHFLSYNMSVDAAAFKKVESLRTFLFGNIRQLPSNHCLRALCIRSSMLPPLNDLAHLRYLSVHDSWVRNLNDSICQLSKLQILKLESCFDFYEIPKKLTQLQDLRHILINKCGSIPDMPPNIGKLRHLRTLSLFDAGSTPGYGLTELSGLRLGGKLHIRGLGNVSNEWDAKEANLRSKKELNRLYLSWGGGANSESNNVSAERVLEALEPPSTLKSFGMNEYQGKQLSSWMRSVVHLRDLVEVILFDCDNCEELPPLGKLPHLKRVHVRGMKNVKWIDGESYEGVEEKAFPSLEKLSVENLPKLERMLRDEGVEMVPHLSQLTIDGVFNFKVPHLPCVEELHARKVVAATSFIEGVGDNMVCLKTLRVSSIKELKVLPDQLRRLGALEYLRIGFWYDLEHFPEHVSEGLTSLRSLSIYCCENLKSLPEGVRHLTCLRHLNIGNCPQLVALPSNMSKLTSLRTVYIYDFSTLPYGLQFVPSLRTLNIERCMFTSLPDWLGDMTTVEELSIWFCEELRSLPSSIQRLTNLSYLSIDRCPHLRKRCMRETGEDWQYIKHIPEIKLDSYSLPEEKSLTLSGESIRRLSCSWNCFKTARQPAKGVVSSNSFDRVLEE*


CDS Sequence:
>Vu_35280.1
ATGGCTGACGCTTTGCTGGGAATTGTGTTTCAAGACTTGCAATCTGTTGTTCAAAGCCAACTTGCAACCTATTGGGGTATTGATCAACAGGCACAGAAGCTTTCCAGCAATCTTACGGCAATTCGTGCTGTCCTCAGAGATGCTGAGAGAAAGCAAATAGCAAGCCATGCTGTGAAGGATTGGCTGCAGAAACTAACAGATGCAGCATATGTGCTTGACGATATATTGGATGAATGTTCGATTCACTCCAGAGAGGTGCTGTCTGATGATGGACATACTTCATGCTTAGCCCATGCACATCCTAAGGACATTCTCTTCCGTTTTCATATTGGAAAGAGGATGAAAAATATCACCCAAAGACTTCACGACATCAATGAAGAAAGACGCATGTTTGAATTACGAGTTGGTGTCACAGAGAAGCCAACAGTAGATGATGGTGAGGATTATCAAACTACCTCTGTCATAACCGAACCCATATTCTGTGGCAGAGACGAGGATCGAGAGAAAGTCGTGAAGCTTCTCCTAGAAGCTAATAACAATGAAGACCTCACCATCTATTCCATCGTTGGTATGGGTGGACTTGGCAAAACAACTCTTGCCAAGCATGTCTTCCATGACCACAGGGTATGTGAAAATTTTGACATGAGAATTTGGGTGTATGTTTCTGTTGATTTCAATGTGAAGGCAGTACTGCAATCCATCATAGAGTATGCCACCGGACAAAACCCCAATCTCCATACTTTAGAAACAATGCGGAAAAAGGTTGAAGAAGTGTTGCAGAGCAAGAGATATTTACTTGTTCTTGATGATGTGTGGAATGAAGACCAAGAGAAATGGAAACATTTGGAGGGGATGTTGCGGTTTGCAAGGGGAGCAAAAGGAGCTACCGTTTTGGTCACAACTCGACTCGAGGAAGTTGCTTCCACCATGGAGACGCATCCAGCTTACCATTTGACAGAATTGTCAGAATATGACAGTTGGTCATTGTTCAAAAGCTATGCGTTTGGACCAAACCGAGAAGAGAAAGAAGAGCTTGTGACAATCGGTGAAGACATTGTGAAAAAATGCGTTGGTTCGCCGCTTGCAATCAAAACACTGGGAAGCCTATTGCGTGATCAAACTGCGGTAACACAATGGGAAAATATAAAGGAAAGTGAGATTTGGAATATACGGAGTGAAAGTAGTTCTAAGACGGATAAGGAAAATTCTATCATGCGTGCTTTGAAACTAAGCTATTTTAATTTGGAGTTGTCATTGCGGAGATGCTTTGCTTTCTGCGCAATATTCCCCAAAGGTTTTGAAATTGTCAAGGAAGAACTAATTCATCTCTGGATGGCTAATGGATTTATTAAATCTGAAGGAAATGTAGAAGTGGAGGATGTCGCCAATAATGTGTGGAGAAAATTATACCGTAGGTCATTCTTTCAAGAAGCAAAGTCTGACAAGTTTGGTATGATTACAAGTTGTAAGATACATGATCTATTTTACGATCTTGCCAAGTCTATTATGGGTGAAGAGTGTGTGATGGTTGAGGAAGGAAGGTTGACTCAGTTGTCAACCAGAGTTCACCATTTACACTTCTTAAGTTATAATATGTCTGTCGATGCAGCTGCTTTCAAGAAAGTTGAATCTCTGCGGACTTTTCTTTTCGGTAATATTAGGCAGTTGCCATCAAACCATTGTCTGCGAGCATTATGTATAAGATCTTCTATGTTGCCCCCATTGAATGATTTAGCACATTTGAGATACTTGAGTGTGCATGATAGCTGGGTGAGAAATTTAAACGATTCAATTTGTCAACTGTCGAAATTGCAAATACTGAAACTGGAGTCTTGCTTTGATTTTTATGAGATACCTAAAAAGTTAACACAATTACAGGATCTAAGACATATTTTGATTAATAAGTGTGGTTCAATACCAGATATGCCTCCGAATATTGGCAAGTTAAGGCATCTAAGAACACTAAGCCTTTTCGACGCGGGTTCAACACCTGGGTATGGGTTGACAGAGTTGAGTGGCTTAAGGCTGGGAGGCAAGCTGCATATCAGAGGACTTGGGAATGTGAGCAACGAATGGGATGCTAAAGAAGCAAATTTGAGGAGCAAGAAGGAGTTGAATCGCCTATACTTGTCATGGGGTGGTGGTGCTAATTCAGAAAGTAATAATGTTAGTGCAGAGAGAGTATTGGAAGCCTTGGAACCTCCCTCAACTCTGAAGAGTTTTGGGATGAATGAATATCAAGGAAAACAGTTATCGAGTTGGATGAGAAGTGTTGTACATTTGAGAGACTTGGTGGAAGTTATACTCTTCGACTGTGACAACTGTGAGGAGCTTCCTCCACTTGGTAAACTACCACACTTGAAAAGGGTACACGTGCGTGGAATGAAAAATGTGAAGTGGATAGATGGTGAGTCGTATGAAGGTGTGGAGGAGAAGGCATTTCCATCGTTGGAGAAACTGAGTGTAGAGAATTTACCAAAGTTGGAAAGGATGTTGAGGGATGAAGGAGTAGAGATGGTCCCCCATCTTTCCCAATTAACAATTGATGGTGTCTTCAACTTTAAAGTCCCACATCTTCCTTGTGTTGAGGAGCTTCATGCTAGAAAAGTTGTAGCAGCGACTTCCTTCATTGAAGGGGTTGGGGATAACATGGTTTGTCTAAAGACTCTGCGTGTTAGCTCAATTAAAGAATTGAAGGTACTACCGGACCAACTGAGGAGGCTGGGTGCCCTGGAGTACCTTCGCATTGGATTTTGGTATGATTTGGAGCATTTTCCAGAACATGTATCGGAAGGTTTGACCTCTCTTCGAAGTTTGAGCATTTACTGCTGTGAGAACTTAAAATCCTTGCCTGAAGGTGTGCGACATTTGACATGTCTTCGGCATTTGAATATCGGCAATTGTCCACAGCTGGTAGCTCTACCAAGCAATATGAGCAAACTAACTTCCCTTCGGACTGTCTATATCTATGATTTCTCTACATTACCATATGGCTTACAATTTGTCCCCTCCCTACGAACTTTGAATATAGAAAGATGCATGTTTACTTCATTGCCAGACTGGCTGGGAGATATGACTACTGTTGAAGAATTAAGCATTTGGTTCTGTGAGGAGTTGAGGTCACTGCCGAGTAGCATTCAACGCCTCACCAACTTGTCTTATTTAAGTATAGACCGATGTCCTCATCTGAGAAAGCGATGCATGAGGGAAACAGGTGAAGATTGGCAATACATAAAGCACATTCCAGAAATAAAACTGGACTCCTACTCACTCCCAGAGGAAAAGTCTTTAACATTAAGTGGTGAGAGTATCCGCCGATTATCTTGCTCATGGAACTGCTTCAAGACTGCTAGACAGCCTGCCAAAGGAGTGGTAAGCAGCAATTCATTTGATCGTGTACTTGAAGAGTGA


Promoter Sequence:
>Vu_35280::LG10:19977992-19979992(-)
GTGGAATAAATGAATTCGCACCCATCTTTCGCTCCAATTTATATACTCTTCCTCTTTCAGTATTTTATTCTCTCTGTTTTTGTTGTTGCTCTCATTTTTAAACCAACAAAGACAAATTACAACGTTTGAGAACATTATTTAAAACATTAATAGATGGATGAGCAAGCCTATTGTGCCAAATGGAATATAAACTAAACTTGTGATTGGTGATAGCTGAAGACTTAAAAGACTGGAAGACACGGTAGAATGAACGACTGAGGAGATGTTTTCAGGTGAAACTATGGAAAATGAGGTGAGCTACATCAGCAAAAACTGGTATAAACCATCCGAATCAAGAGATCTTTTAATAAAATGGAATGATCAACCCAGGATTTAATAAAAATGACAAAAGGATGACACTCAAAATAAACATGATTGTCATGTGCAAATCGACTAACACTGGTGAGATTTTTATCGATGGAAGGCACATGTACTAAGTTTTTGAGATGTACAGTAACAAAAGGCTTGTGACTGGATATAAAGGAGCAGAATATGAGGATTAACCACATAACGGTGGAGCCGATGGGCTTTGATAACTGGTTTAACCTGCTGTTTCAGAGAAGGAAATTGGTATGTGAGAAGAGAACCGGCGACAAATAAGACTGGGTTTTAAAAACACTACCTATGAAGAAACAAAGTGAAGAAACAGTGACTACATGATACTATGTTGAAAATAGAAAATCAGAAATAGAATCTAAGTATCATTATTATTAAAACCAAAACAAAAAAGGATATTCCCTTATATTCTTAACACAAATCCCTCAAATTTCAAATCAAAATTAGCTATTCCTATATTAAAGAAAATCTCGGCACAAGCTCCAAGTAAGTTACACTAGATTTAAACACTATGATTTGTTTTAGTATTTCTGTCCAAAATAAGTTACTTTTTAGATTTTTTTTTTTGTAAAATGTTCGCGCATAACTTTATTTATAAGAAAAACTTTAGTTATTCGTGATTCTTAGGGGTGTTCATGTGTAAGATAAGCTTCAACTTATAGGTAAACTTAAACTTGAACTAATGATGCTTTGAGTTATTTTTATTTGACTTTTTACTATATTCCTTATGTTATAGTTAACATTCACAATAAATAAATATATTTATTTATAAAGTATGATAAAAAAGATTATACATGTTATACAGCTTTTTTTTTTAATTATAATAACTTTCGCCCTTTTTTGAAAAGGAAAATATTTAAATATACACTTTATTTTGAATTGTTCTGAAGCTACATTTTTTTTCCTCATTTAGGCCTTGTTGACTTGAATGGATTTGAGGGAGAGTAATTAAGGGAATTTGAGAGGATTTGAAAATAAATTTTTTTGTTGAATATTTGAGTGAATTTGGAGGTAAATAATCTCATTTACCTCCAAATTCACTCAAATATTCAACAAAAAAATTTATTTTTAAATCCTCTCAAATTTTCTTAATTACTCTCCCTCAAATCCATTCAAGTGAACAAGTCCTTAAACTTCCAACATATCTGTGACTATATTGACAAATCCTTAAAGGATATCTTCTGGAGGAGAAGTAAGGAAAGGGATAGAATGTTGCATTGCTTGGAAGATTGATTTCGAATCTTTTGAACTCTGCTAATCGGTTATGGGTTTCCTTCACGAATCCAATATCTTTGGGGATGGCAACTTATTCTTGAGCTGCAAGAAGAAGGAATTCCATCATCAAGGTGTTGATACTTTTCTGAAGATGTTCTTCTATTTGTAGTCTCCCTTTTTTCCACAATACGAATGAGATTTATTTATTTTTCATTTTACTCAGATAAACTTCAAAAATAAAATGTACCTTGCTTCTGCCATTACAGTAATTGTTATATTCCAAATTCCCACCACAAGTTAGTTAAACTATACATATGGAATTCTTTCCAAACAAATTATTCACTCATCGTAGCCTCTCTTCTCCATAATCACCACCAACCTTTCCTTCATTCTAGCTCTCGTTCCTTCCA


Gene Sequence:
>Vu_35280(-)
ATGGCTGACGCTTTGCTGGGAATTGTGTTTCAAGACTTGCAATCTGTTGTTCAAAGCCAACTTGCAACCTATTGGGGTATTGATCAACAGGCACAGAAGCTTTCCAGCAATCTTACGGCAATTCGTGCTGTCCTCAGAGATGCTGAGAGAAAGCAAATAGCAAGCCATGCTGTGAAGGATTGGCTGCAGAAACTAACAGATGCAGCATATGTGCTTGACGATATATTGGATGAATGTTCGATTCACTCCAGAGAGGTGCTGTCTGATGATGGACATACTTCATGCTTAGCCCATGCACATCCTAAGGACATTCTCTTCCGTTTTCATATTGGAAAGAGGATGAAAAATATCACCCAAAGACTTCACGACATCAATGAAGAAAGACGCATGTTTGAATTACGAGTTGGTGTCACAGAGAAGCCAACAGTAGATGATGGTGAGGATTATCAAACTACCTCTGTCATAACCGAACCCATATTCTGTGGCAGAGACGAGGATCGAGAGAAAGTCGTGAAGCTTCTCCTAGAAGCTAATAACAATGAAGACCTCACCATCTATTCCATCGTTGGTATGGGTGGACTTGGCAAAACAACTCTTGCCAAGCATGTCTTCCATGACCACAGGGTATGTGAAAATTTTGACATGAGAATTTGGGTGTATGTTTCTGTTGATTTCAATGTGAAGGCAGTACTGCAATCCATCATAGAGTATGCCACCGGACAAAACCCCAATCTCCATACTTTAGAAACAATGCGGAAAAAGGTTGAAGAAGTGTTGCAGAGCAAGAGATATTTACTTGTTCTTGATGATGTGTGGAATGAAGACCAAGAGAAATGGAAACATTTGGAGGGGATGTTGCGGTTTGCAAGGGGAGCAAAAGGAGCTACCGTTTTGGTCACAACTCGACTCGAGGAAGTTGCTTCCACCATGGAGACGCATCCAGCTTACCATTTGACAGAATTGTCAGAATATGACAGTTGGTCATTGTTCAAAAGCTATGCGTTTGGACCAAACCGAGAAGAGAAAGAAGAGCTTGTGACAATCGGTGAAGACATTGTGAAAAAATGCGTTGGTTCGCCGCTTGCAATCAAAACACTGGGAAGCCTATTGCGTGATCAAACTGCGGTAACACAATGGGAAAATATAAAGGAAAGTGAGATTTGGAATATACGGAGTGAAAGTAGTTCTAAGACGGATAAGGAAAATTCTATCATGCGTGCTTTGAAACTAAGCTATTTTAATTTGGAGTTGTCATTGCGGAGATGCTTTGCTTTCTGCGCAATATTCCCCAAAGGTTTTGAAATTGTCAAGGAAGAACTAATTCATCTCTGGATGGCTAATGGATTTATTAAATCTGAAGGAAATGTAGAAGTGGAGGATGTCGCCAATAATGTGTGGAGAAAATTATACCGTAGGTCATTCTTTCAAGAAGCAAAGTCTGACAAGTTTGGTATGATTACAAGTTGTAAGATACATGATCTATTTTACGATCTTGCCAAGTCTATTATGGGTGAAGAGTGTGTGATGGTTGAGGAAGGAAGGTTGACTCAGTTGTCAACCAGAGTTCACCATTTACACTTCTTAAGTTATAATATGTCTGTCGATGCAGCTGCTTTCAAGAAAGTTGAATCTCTGCGGACTTTTCTTTTCGGTAATATTAGGCAGTTGCCATCAAACCATTGTCTGCGAGCATTATGTATAAGATCTTCTATGTTGCCCCCATTGAATGATTTAGCACATTTGAGATACTTGAGTGTGCATGATAGCTGGGTGAGAAATTTAAACGATTCAATTTGTCAACTGTCGAAATTGCAAATACTGAAACTGGAGTCTTGCTTTGATTTTTATGAGATACCTAAAAAGTTAACACAATTACAGGATCTAAGACATATTTTGATTAATAAGTGTGGTTCAATACCAGATATGCCTCCGAATATTGGCAAGTTAAGGCATCTAAGAACACTAAGCCTTTTCGACGCGGGTTCAACACCTGGGTATGGGTTGACAGAGTTGAGTGGCTTAAGGCTGGGAGGCAAGCTGCATATCAGAGGACTTGGGAATGTGAGCAACGAATGGGATGCTAAAGAAGCAAATTTGAGGAGCAAGAAGGAGTTGAATCGCCTATACTTGTCATGGGGTGGTGGTGCTAATTCAGAAAGTAATAATGTTAGTGCAGAGAGAGTATTGGAAGCCTTGGAACCTCCCTCAACTCTGAAGAGTTTTGGGATGAATGAATATCAAGGAAAACAGTTATCGAGTTGGATGAGAAGTGTTGTACATTTGAGAGACTTGGTGGAAGTTATACTCTTCGACTGTGACAACTGTGAGGAGCTTCCTCCACTTGGTAAACTACCACACTTGAAAAGGGTACACGTGCGTGGAATGAAAAATGTGAAGTGGATAGATGGTGAGTCGTATGAAGGTGTGGAGGAGAAGGCATTTCCATCGTTGGAGAAACTGAGTGTAGAGAATTTACCAAAGTTGGAAAGGATGTTGAGGGATGAAGGAGTAGAGATGGTCCCCCATCTTTCCCAATTAACAATTGATGGTGTCTTCAACTTTAAAGTCCCACATCTTCCTTGTGTTGAGGAGCTTCATGCTAGAAAAGTTGTAGCAGCGACTTCCTTCATTGAAGGGGTTGGGGATAACATGGTTTGTCTAAAGACTCTGCGTGTTAGCTCAATTAAAGAATTGAAGGTACTACCGGACCAACTGAGGAGGCTGGGTGCCCTGGAGTACCTTCGCATTGGATTTTGGTATGATTTGGAGCATTTTCCAGAACATGTATCGGAAGGTTTGACCTCTCTTCGAAGTTTGAGCATTTACTGCTGTGAGAACTTAAAATCCTTGCCTGAAGGTGTGCGACATTTGACATGTCTTCGGCATTTGAATATCGGCAATTGTCCACAGCTGGTAGCTCTACCAAGCAATATGAGCAAACTAACTTCCCTTCGGACTGTCTATATCTATGATTTCTCTACATTACCATATGGCTTACAATTTGTCCCCTCCCTACGAACTTTGAATATAGAAAGATGCATGTTTACTTCATTGCCAGACTGGCTGGGAGATATGACTACTGTTGAAGAATTAAGCATTTGGTTCTGTGAGGAGTTGAGGTCACTGCCGAGTAGCATTCAACGCCTCACCAACTTGTCTTATTTAAGTATAGACCGATGTCCTCATCTGAGAAAGCGATGCATGAGGGAAACAGGTGAAGATTGGCAATACATAAAGCACATTCCAGAAATAAAACTGGACTCCTACTCACTCCCAGAGGAAAAGTCTTTAACATTAAGTGGTGGTAAGTGAATGATTGTTTAATTTTCTATAATTTCTCCTTATTGTGAGATTGTTCATATTTTAAAGTTAGTAATTGCATGTAGAGAGTATCCGCCGATTATCTTGCTCATGGAACTGCTTCAAGACTGCTAGACAGCCTGCCAAAGGAGTGGTAAGCAGCAATTCATTTGATCGTGTACTTGAAGAGTGA