Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_35152 LG10 18060905 18065148 SRSF protein kinase 2
Map

Annotations  
category   relationship type   keyword
Pathway   B 09181 Protein families: metabolism   C 01001 Protein kinases [BR:ko01001]
SNP Position Effect Amino acid change
T/G 18061137 3_prime_UTR_variant
A/C 18061200 missense_variant p.Ile432Met
C/T 18061345 missense_variant p.Arg384Gln
G/A 18061415 stop_gained p.Arg361*
C/T 18061514 intron_variant
A/G 18061522 intron_variant
G/T 18061597 synonymous_variant p.Leu326Leu
G/C 18061663 3_prime_UTR_variant
G/T 18061722 3_prime_UTR_variant
T/C 18061792 3_prime_UTR_variant
G/T 18061814 3_prime_UTR_variant
A/T 18061823 3_prime_UTR_variant
G/A 18061846 3_prime_UTR_variant
A/C 18061890 3_prime_UTR_variant
G/C 18061913 3_prime_UTR_variant
A/C 18061956 3_prime_UTR_variant
C/T 18061994 3_prime_UTR_variant
A/C 18062154 3_prime_UTR_variant
A/G 18062187 3_prime_UTR_variant
T/C 18062200 3_prime_UTR_variant
G/T 18062289 3_prime_UTR_variant
A/G 18062674 stop_lost p.Ter326Argext*?
G/T 18062896 synonymous_variant p.Arg252Arg
T/C 18063326 synonymous_variant p.Lys108Lys
A/T 18063732 intron_variant
A/T 18063733 intron_variant
T/G 18063756 intron_variant
A/C 18063901 intron_variant
C/T 18064059 intron_variant
G/T 18064461 intron_variant
G/A 18064521 synonymous_variant p.Thr58Thr
C/T 18064701 5_prime_UTR_variant
C/A 18064780 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_35152.2
MSCSSSSGSEEDDEGFDSYRKGGYHAVRVGDQFGGGRYIAQRKLGWGQFSTVWLAYDTKTSSFVALKIQKSAAEFVQAALHEIDILSSIADHDPSNSKFVIQLIDNFKHTGPNGQHLCMVLEFLGDSLLRLIKYNRYKGLPLNKVREICKCVLIGLDYLHTDLGIIHSDLKPENILLCSTIDPAKDPLRSGLSPILERPEGNTNGGVSSLIEKRLKRRARSAVAKISGRRGSMGGTEDVAKTDRNINGIDVRCKIVDFGNACWAEKQFAEEIQTRQYRAPEVVLISGYSFPVDMWSFACIAFELATGDMLFTPKGGQGFSEDEVW*

>Vu_35152.1
MSCSSSSGSEEDDEGFDSYRKGGYHAVRVGDQFGGGRYIAQRKLGWGQFSTVWLAYDTKTSSFVALKIQKSAAEFVQAALHEIDILSSIADHDPSNSKFVIQLIDNFKHTGPNGQHLCMVLEFLGDSLLRLIKYNRYKGLPLNKVREICKCVLIGLDYLHTDLGIIHSDLKPENILLCSTIDPAKDPLRSGLSPILERPEGNTNGGVSSLIEKRLKRRARSAVAKISGRRGSMGGTEDVAKTDRNINGIDVRCKIVDFGNACWAEKQFAEEIQTRQYRAPEVVLISGYSFPVDMWSFACIAFELATGDMLFTPKGGQGFSEDEDHLALMMELLGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFCPLDKLLTDKYKFSVNDAREFSEFLLPLFDFAPEKRPTARQCLEHPWLKCMESPPNQTAEEKVHVGISNLKISQSKA*


CDS Sequence:
>Vu_35152.2
ATGTCGTGTTCGTCGTCGTCGGGGTCGGAGGAAGACGATGAGGGATTCGACTCTTACCGGAAAGGAGGGTACCACGCCGTCAGAGTCGGCGATCAGTTCGGCGGCGGCAGGTACATAGCGCAGAGGAAACTGGGTTGGGGTCAGTTCTCCACCGTCTGGCTTGCTTACGATACCAAAACTTCTTCATTTGTTGCTCTCAAGATCCAGAAAAGTGCCGCCGAGTTTGTTCAGGCTGCCCTTCATGAGATTGATATTCTTTCATCCATTGCTGACCATGACCCATCAAATTCAAAATTTGTGATTCAATTGATTGACAACTTTAAACACACTGGTCCAAATGGGCAGCATCTTTGCATGGTCCTGGAGTTTCTTGGCGATAGTTTGCTTCGCTTGATCAAATATAACCGTTACAAAGGCCTTCCATTGAATAAAGTTAGAGAGATTTGCAAATGCGTTTTAATTGGTTTGGACTACTTGCATACTGATCTTGGTATAATCCACTCTGACCTAAAACCTGAAAACATTCTTCTATGTTCAACCATTGATCCTGCCAAAGACCCTTTAAGATCTGGACTCTCTCCAATTCTAGAGCGACCTGAGGGAAACACAAATGGTGGAGTATCAAGTCTTATTGAGAAAAGGTTGAAAAGGAGAGCAAGGTCGGCAGTTGCTAAGATATCCGGAAGGAGAGGGTCAATGGGAGGAACAGAAGATGTTGCAAAGACCGATAGAAACATTAATGGGATTGATGTGCGATGCAAGATAGTAGATTTTGGAAATGCTTGTTGGGCTGAGAAGCAGTTTGCAGAAGAAATACAGACAAGACAGTACAGAGCACCTGAAGTTGTACTGATATCTGGCTATTCTTTCCCTGTTGACATGTGGTCTTTTGCTTGCATAGCTTTTGAACTAGCCACTGGAGATATGTTGTTTACACCAAAGGGTGGACAAGGTTTTAGTGAGGATGAGGTATGGTGA

>Vu_35152.1
ATGTCGTGTTCGTCGTCGTCGGGGTCGGAGGAAGACGATGAGGGATTCGACTCTTACCGGAAAGGAGGGTACCACGCCGTCAGAGTCGGCGATCAGTTCGGCGGCGGCAGGTACATAGCGCAGAGGAAACTGGGTTGGGGTCAGTTCTCCACCGTCTGGCTTGCTTACGATACCAAAACTTCTTCATTTGTTGCTCTCAAGATCCAGAAAAGTGCCGCCGAGTTTGTTCAGGCTGCCCTTCATGAGATTGATATTCTTTCATCCATTGCTGACCATGACCCATCAAATTCAAAATTTGTGATTCAATTGATTGACAACTTTAAACACACTGGTCCAAATGGGCAGCATCTTTGCATGGTCCTGGAGTTTCTTGGCGATAGTTTGCTTCGCTTGATCAAATATAACCGTTACAAAGGCCTTCCATTGAATAAAGTTAGAGAGATTTGCAAATGCGTTTTAATTGGTTTGGACTACTTGCATACTGATCTTGGTATAATCCACTCTGACCTAAAACCTGAAAACATTCTTCTATGTTCAACCATTGATCCTGCCAAAGACCCTTTAAGATCTGGACTCTCTCCAATTCTAGAGCGACCTGAGGGAAACACAAATGGTGGAGTATCAAGTCTTATTGAGAAAAGGTTGAAAAGGAGAGCAAGGTCGGCAGTTGCTAAGATATCCGGAAGGAGAGGGTCAATGGGAGGAACAGAAGATGTTGCAAAGACCGATAGAAACATTAATGGGATTGATGTGCGATGCAAGATAGTAGATTTTGGAAATGCTTGTTGGGCTGAGAAGCAGTTTGCAGAAGAAATACAGACAAGACAGTACAGAGCACCTGAAGTTGTACTGATATCTGGCTATTCTTTCCCTGTTGACATGTGGTCTTTTGCTTGCATAGCTTTTGAACTAGCCACTGGAGATATGTTGTTTACACCAAAGGGTGGACAAGGTTTTAGTGAGGATGAGGATCACCTCGCCCTGATGATGGAACTCCTTGGAAAGATGCCCCGGAAGATTGCTATTGGTGGAGCTCAGTCCAAGGATTACTTTGACAGGCATGGGGATCTAAAAAGGATTCGAAGGCTAAAATTCTGTCCACTAGACAAATTGCTGACTGATAAATATAAATTTTCAGTTAATGATGCTCGAGAGTTTTCAGAATTTCTTCTACCACTCTTTGATTTTGCCCCTGAGAAGCGACCAACTGCGAGACAGTGCCTGGAACATCCATGGCTGAAGTGCATGGAGTCCCCTCCAAATCAAACTGCTGAGGAAAAAGTGCATGTTGGAATTAGCAACCTTAAAATCTCACAGTCCAAGGCATAG


Promoter Sequence:
>Vu_35152::LG10:18065148-18067148(-)
TAATAATAGACTCCCGAATCTCCCAAAATAGTTCACACCCTTTACCTCAATATCTCACTACTGAAAACCCTATTTTTTCACTGAAACACTCAAAAACTTCAACAATGAAACACCTCTTAGTTTCATATCAGATTTTTTCTCACAAAACACTTATAACAAGTCTCAAATTACCTCACGACAACTCCTAGGCAATTGCTTTCTCACCTCAATCACTCTTTCTTGAACTCATCATTAAACCTCCATTTTTAGCCTTAAAACTTAAGAATTTGACTACTACTCACCCCAAACACTTTGAATTCGGTTTCAAACACCAAAACAACTTTATCACATACAATCATGACAATATTAAACATCAAAATCACGTCATTCCTAATATTCAAACAACATATTATCATTTATCATCATTTAAATACAAATATTACTAAAATAATCATTCGAATAGACAATAAATTCCCATAAACATAATCTAAACAAAGTCTAGTTTCCTTTACCTCACAAAGAATCGTCCAACTCTAAAATGCCTCACATGTTACTTGAAACACAAGGAAATTTCTAGAAGGACTACAAAAAACTGAATTGGAAACAAATTGAGTCTTTAGGACCCCAGATTAACCAAGAACAAGTAGGAGAAGCAAGATCACGCATGCAACTGACAACTTATTTCTCCTAATTTCATATTAAAGACAAAAGAGAAAAGGGAGTCGAAAAACTTACTTGCTCTATGACAGATCCTGATCAGTTAGAAATGAAGATAACTTAGTTGTGATCTCCTAAGAACTTTTTGATCATTAAGCAAATGATCAAAGGATGAGAAATCTAAGAGAGAAGTAAAAGAAGATTAAGAAAAAAAGATTTTAAAAAAATAGACAGTGTTTTAAATAATGAGACAAATTTAAAAAAATTTATTTCTATTATTGAATTTCTTTTAAAATAAAATATTTTATCTTATTATTTTAAAACACCTACCAACTTTAATTCTCTATTTTCTAAATTTTAGAAAAAACACAATGATATAATAAAATTTACAATGTCACTTATCTCATTCTACATTTTTCAACAAATTTATAAATTAATTTCATTAGATATTTCTAGTTTAATAAATTAAGATTAGAGCATAAATTAACAACTTATAATGCAATAGTCAACTTATCAATTATAAATTAATTTATCACTTATAAAAAAGTTATAAAGTAGTTTTACGAGAAATGCTGCAAATAAAAGTCTATAATGCATAACATAACATGTTCTCTAACACTGACAACAAAACATATTCTCTCTGCACTCATGATGTTACTTATGCATTTAGCTTTTCATGCCATTTTCAGCTTTTAGGTCCATCAATTTTAAAAAAAAAACTACAAATGATTTTATTTTTAACCATACCAATCTGCTTCCAATTTATTCCACTACATTTTACTGTCATATTAATTGCCAGCTTCATAGGTATATGAGATCTTAAAAAGGGAAAAAGAATGACTGATAAAGTTTAAGAACTTAGCATCAGTGAATCAATTCAGCTACAAAGACCACAACATTAAAATGGAAAAGTTAATGAAACACTTTGAATGGAGTAGCTGTTTTTCTGAGACTGTCATGCCATGTGCCAGTGTGATCCTCCTCAGTCATATCTAGAGATGCTTTATGTTAGAGAGGAAGTATAGTAGAGAGGTATTAAATGAATGCTTGAAAGGTGTTTGAATAAATTCATAAATGAGAAGAATAATAAGCTCAAGATACACTTTCTAAGTAAGTAGCATTACAAAAAGTAAGAAAATACATGAATTTTTAGTTCAACATATTGATTGCACATTAGACTAATAAGTCAAATCAAATCTACGCAAAATAAAACCGAATAAATAAACCGAGACTTTTAAGATTTCCTACTAAATTAACTCATGAAATTATTGGTTGTAGGAGTGATTAAGCAGGTCATTACCTAGGAACCCTAGAAAAACAAAGAAAGAAACAAACCATAAAGATATACATTAAAAAAAAAAGGT


Gene Sequence:
>Vu_35152(-)
GCATGATGTTGGAAATGACAGAAGCCCACAAAGCTGTTTCAGAGTATGATTGCTCCACCTCACTTGGAAACAGACAGTTGAAATTATGGAATCCCGAAAATAGTCAATGACAGAGGTAAACCAACCGAGGAAAACGAAGGGCATAGAGGGAATGATAAAGACGATGGGCTATGAAATTGGAGTAGGAAAAATGGAAGACCCACACATCACATGAAGAAAGAAAGAGAAAAAAGTGGAGGAATAAGGAATAGGAATTGCATCCTCCTAAACAAAAGCCTCACACACCGCAAATATAATAACGCTTCATCCTCCTAAACAAAGACTTCGCGTCCAAGCAATTTCCGAGTTAAAGAAGATATATCAAAAGGGGAAAGCAGAGCGAATCACTGGAGAATTTTCAAGAAAGAATCAGATTTTGAGTTTCTTTTGGTGAATCTGAATAGATCAGAAGGTGATGTCGTGTTCGTCGTCGTCGGGGTCGGAGGAAGACGATGAGGGATTCGACTCTTACCGGAAAGGAGGGTACCACGCCGTCAGAGTCGGCGATCAGTTCGGCGGCGGCAGGTACATAGCGCAGAGGAAACTGGGTTGGGGTCAGTTCTCCACCGTCTGGCTTGCTTACGATACCAAAACTTCTGTATGTTTCTTACCCATCTTTTTCCCCCTTTATCATGTCGTTTTTTTTCTCTGTTTTCTGCAAAAAGGCGTCGTTTTGAGACCACCCTTTTTGGGTTTGGATTTTGGGCTGTGATGAGTGTACTGGGTTTGAAAATTTTCATTGTGCTTTGTTGGTTGGAAATTTGCGTCCTTTGAATTTTGTGGAGGTTCCGGGATCTTCGGTTCTTGTTTGGGCACCTTTATGTCGTTTTGTGTCTGAGATTATTTGGCTTCTTGATGTTGATTGCTTGCCACTTTGGAAATACGAATCCATGATTCCTCCTTTTGTTCAACTTGTCATAAAAAGGAATCTATGCATGTTGGTTTAACGGGAAATGGTGAATGGTCCTCACAGAATGTGACCACCTGGTTTACATGGGTGATAGATTTGTCTGTACATAGAGGGGCAATAAATGTGCCCCTGCTCCTTCTGTTTGAACAGCTTGATTCTGATTTGGTGACGATTTTGTGTATTAAGCACCTCGGTAACCGTGACACTGGTGTTTCAATTTTAATATAAGGGTAAACGTGAGCTGTATATGGAATGGTAGTTAGTTATTGCGGTTCTGAAGTTAAATTCTGATTCAGCATAGGTGAAGGTTAAGACTAAGGAATGAGTCTTTTATGTGTATAACTGCCATCTAGATGGATCCAACACTTCTGCCACCATAAATCGCATAACTTGTAGTTGTAGGTTCTTGCTAGTGCTTGAATTTAGAAAGCAGAAAATGGTGCAAATCCTAAGAAGAAAATAAGTTTTAGTTATACAGCATATGCACAATGACACTCTTCAGTGATACAGGTGGGGTTGTTCCACGGTGAACCATGTCCAACTTCATCCTTTGTTCATTTATGTGTGTTTTTGATTCAGAAACCTTATATGAAGGTTAAACATGTATGTACGGTTGTTTATTTATTCTCAGAGTTTACCTTTACCCCCAAACATGGTATTTTCTTGTTATTTTTGTGCACCAGCTTTCATTTTCTTTTCCAATTTTATCTAATTTTTAGATTGTGGTTTTCAGTCATTTGTTGCTCTCAAGATCCAGAAAAGTGCCGCCGAGTTTGTTCAGGCTGCCCTTCATGAGATTGATATTCTTTCATCCATTGCTGACCATGACCCATCAAATTCAAAATTTGTGATTCAATTGATTGACAACTTTAAACACACTGGTCCAAATGGGCAGCATCTTTGCATGGTCCTGGAGTTTCTTGGCGATAGTTTGCTTCGCTTGATCAAATATAACCGTTACAAAGGCCTTCCATTGAATAAAGTTAGAGAGATTTGCAAATGCGTTTTAATTGGTTTGGACTACTTGCATACTGATCTTGGTATAATCCACTCTGACCTAAAACCTGAAAACATTCTTCTATGTTCAACCATTGATCCTGCCAAAGACCCTTTAAGATCTGGACTCTCTCCAATTCTAGAGCGACCTGAGGGAAACACAAATGGTGGAGTATCAAGTCTTATTGAGAAAAGGTTGAAAAGGAGAGCAAGGTCGGCAGTTGCTAAGATATCCGGAAGGAGAGGGTCAATGGGAGGAACAGAAGATGTTGCAAAGACCGATAGAAACATTAATGGGATTGATGTGCGATGCAAGATAGTAGATTTTGGAAATGCTTGTTGGGCTGAGAAGCAGTTTGCAGAAGAAATACAGACAAGACAGTACAGAGCACCTGAAGTTGTACTGATATCTGGCTATTCTTTCCCTGTTGACATGTGGTCTTTTGCTTGCATAGCTTTTGAACTAGCCACTGGAGATATGTTGTTTACACCAAAGGGTGGACAAGGTTTTAGTGAGGATGAGGTATGGTGATTTCATTAATACTATAATGGTTAATTACGCTTTTAAATCTAACGCAATTATAATTAATTATAAATGGTCTTGCATAGACTGTTTAGCTTAGATTTCTTTGGCATAAATTATAGATAAAAGCATGTTTTCATAATTCAATAATTCGATTAACTAGTTTGAGAGGAGGTTTAGGTGTGGAGTTGGTGCTGGAAATCACTCTTGATTATTGGCTTTAAAGGGTGCTGGAAATCACTCTTGATTATGCTACACTTTGGTGCATCTGGTTGGATCATAATTCCATATTTTTTAAGGAGGTGCTTTAATTTTGTGTAAAGCATGTGATCTTTTTGAAAGTAGCAAGACTATCAGAAACGATTTGAAAAAAATGGTTGAATCTTGTTATCTTTTTATTGTGGAATATGTGAAAGGTAACATAATACAAAAGAATAGAATTCATTGAATCACCTTGTTAAACCAGTAAGCCAGATGTCAATTTGACAAAATTTCTGTGCTATTTTACTAAAGCATTTTTTGCATCTCTCATGACAAAATAGTTTTGACAGTAATTGTATAATCAGTCTCGAGTGCCAAGATTATTTTAGAATATCTCTTCTGTTGTAATAAATTATCTGTAAGTATTCATGTTTTCATCTTTTTATGATCCTTTTACAAGCTACAGGCCTGTTGTGAGTGGAACTGAAAATGTTTTTTCTGGTTGCGTTTTTATTTCTGAAAATGAGTTCTTACAATCATAGGATGAAATTGAAAGTTTCACGCTTCTGATCTGTGATCAACAACTCTTTAAATAGCTACAGTAAGAAATCTATCAAATTGTAGTTTCCAAAGCTGAAGCTTTTAATCTTGGCTGATATTGTTGCCAAAAAAGAGGGTCAAGATTGAATTTTTGCTTCATGGATTGGAGTCAGAACTATTCTTTGATCTGTTCATCAACAAAAAGGAAGGAAAAAATCACCACGGTCATTAATGTTAGGTCACATGTGATTGATTGCCTGAACTTGTTGAACACAACTCTACCCTAAAGATTTTTTTAGCAGAATACTAAACTCTGCATTTTTGTTGATTTTAGGATCACCTCGCCCTGATGATGGAACTCCTTGGAAAGATGCCCCGGAAGGTGAGTACACTCTTGAACACTTTGTTCATATAGTTTATTGAAGGGCTACTCTGTCATATCTAATGCTTGTGAGTTGCAGATTGCTATTGGTGGAGCTCAGTCCAAGGATTACTTTGACAGGCATGGGGATCTAAAAAGGATTCGAAGGCTAAAATTCTGTCCACTAGACAAATTGCTGACTGATAAATATAAATTTTCAGTTAATGATGCTCGAGAGTTTTCAGAATTTCTTCTACCACTCTTTGATTTTGCCCCTGAGAAGCGACCAACTGCGAGACAGTGCCTGGAACATCCATGGCTGAAGTGCATGGAGTCCCCTCCAAATCAAACTGCTGAGGAAAAAGTGCATGTTGGAATTAGCAACCTTAAAATCTCACAGTCCAAGGCATAGTCACATCACATCTTTAAGCCCCTCCTTCCACATGAACTATTGATTGTGATATTATTATTTTTTGTTAAACTTCAATAAGATTCTTTCTATTGGATTATTAACTTCAAAGATGTAAATCAGTAAAGAATTTTGTTCCTCCACAGATATCTGACACCAGAATTTGCCTGTATACTGTTCATATATGTTGTAAGTCATGACATCATATGACTTTAATTCAAGTCTTAGCTTTTTCTTTAATCTGAATTTGGAGTTCAAGTTTCCT