Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_35140 LG10 17950084 17953165 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/A 17950142 3_prime_UTR_variant
A/T 17950162 3_prime_UTR_variant
G/C 17950218 3_prime_UTR_variant
C/T 17950232 missense_variant p.Ser404Asn
A/G 17950234 synonymous_variant p.Phe403Phe
A/C 17950235 missense_variant p.Phe403Cys
G/C 17950381 synonymous_variant p.Arg354Arg
A/G 17950524 synonymous_variant p.Leu307Leu
A/G 17950597 synonymous_variant p.Leu282Leu
C/T 17950711 upstream_gene_variant
T/C 17950784 upstream_gene_variant
A/T 17950791 splice_donor_variant&intron_variant
T/C 17950909 missense_variant p.Asn218Ser
C/G 17950960 upstream_gene_variant
A/G 17951034 upstream_gene_variant
T/A 17951171 missense_variant p.Tyr203Phe
A/G 17951172 missense_variant p.Tyr203His
T/C 17951343 upstream_gene_variant
A/G 17951352 upstream_gene_variant
C/T 17951694 5_prime_UTR_variant
T/C 17951782 5_prime_UTR_variant
G/T 17951847 5_prime_UTR_premature_start_codon_gain_variant
C/G 17951961 5_prime_UTR_variant
C/T 17952007 5_prime_UTR_variant
T/C 17952029 5_prime_UTR_premature_start_codon_gain_variant
G/A 17952092 5_prime_UTR_variant
A/T 17952096 5_prime_UTR_premature_start_codon_gain_variant
T/G 17952111 5_prime_UTR_variant
A/G 17952159 5_prime_UTR_variant
C/G 17952178 5_prime_UTR_variant
C/T 17952228 5_prime_UTR_variant
T/A 17952235 5_prime_UTR_variant
C/T 17952238 5_prime_UTR_variant
C/T 17952260 5_prime_UTR_premature_start_codon_gain_variant
C/T 17952267 5_prime_UTR_variant
A/G 17952292 5_prime_UTR_variant
G/A 17952301 5_prime_UTR_variant
C/A 17952335 5_prime_UTR_variant
C/T 17952339 5_prime_UTR_variant
C/T 17952342 5_prime_UTR_variant
A/G 17952349 5_prime_UTR_variant
C/A 17952372 5_prime_UTR_variant
G/T,* 17952374 5_prime_UTR_premature_start_codon_gain_variant
C/A,* 17952375 5_prime_UTR_variant
G/A,* 17952376 5_prime_UTR_premature_start_codon_gain_variant
A/T 17952422 5_prime_UTR_variant
G/A 17952425 5_prime_UTR_variant
G/A 17952448 5_prime_UTR_variant
A/T 17952493 5_prime_UTR_variant
C/T 17952495 5_prime_UTR_variant
T/G 17952520 5_prime_UTR_variant
C/A 17952521 5_prime_UTR_variant
A/G 17952572 5_prime_UTR_variant
A/G 17952574 5_prime_UTR_variant
A/T 17952583 splice_region_variant&intron_variant
T/C 17952800 synonymous_variant p.Thr52Thr
G/T 17952801 missense_variant p.Thr52Lys
C/T 17953075 5_prime_UTR_variant
T/A 17953145 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_35140.2
MTMQSEINFLGRVSHQNLVKLLGYCCDDVEFLLVYEFMPKGSLENHLFRRNTNTEPLSWDTRLKIAIGAARGLAFLHTSEKQIIYRDFKASNILLDEDYNAKISDFGLAKLGPSGGVSHVTTRIMGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEILTGLRALDRNRPLEQQNLIEWAKPSLSDKRKLKSIMDERIEGQYSTKAAMKAAHLTLKCLQRDHRKRPPMKDVLETLERIELIKDRRK*PKKQCSMLPTLFSSHYPIYPPSVWPFIRKILLQHVYSAFS*

>Vu_35140.1
MGLCFSSGAPSQTPSNSLHYSGSGREGESVNGGSSSVSSISGNNVVFPSVETRNLKQFNFAELKAATKGFRSDTLLGEGGFGKVYKGWLHEETLTPAKAGSGMVVAVKKLNSESVQGFREWQSEINFLGRVSHQNLVKLLGYCCDDVEFLLVYEFMPKGSLENHLFRRNTNTEPLSWDTRLKIAIGAARGLAFLHTSEKQIIYRDFKASNILLDEDYNAKISDFGLAKLGPSGGVSHVTTRIMGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEILTGLRALDRNRPLEQQNLIEWAKPSLSDKRKLKSIMDERIEGQYSTKAAMKAAHLTLKCLQRDHRKRPPMKDVLETLERIELIKDRRK*PKKQCSMLPTLFSSHYPIYPPSVWPFIRKILLQHVYSAFS*


CDS Sequence:
>Vu_35140.2
ATGACAATGCAGTCTGAAATCAATTTTTTAGGAAGAGTTTCTCACCAAAACCTGGTGAAGCTTTTGGGTTACTGTTGTGACGATGTGGAATTTCTACTTGTGTACGAGTTCATGCCAAAGGGAAGCTTGGAGAATCATCTCTTTAGAAGAAATACGAACACAGAACCACTGTCTTGGGACACCAGACTCAAAATAGCTATTGGTGCAGCTAGAGGCTTGGCTTTCTTACACACCTCAGAAAAGCAAATCATATACAGAGATTTCAAAGCCTCAAATATACTACTTGATGAGGATTACAATGCAAAAATTTCAGATTTTGGTTTGGCCAAATTAGGCCCTTCTGGGGGAGTTTCACACGTGACTACCAGGATCATGGGCACATATGGCTATGCTGCTCCAGAATACATTGCAACAGGACACTTGTATGTGAAGAGTGATGTTTATGGTTTTGGTGTAGTGCTGCTTGAAATTCTTACAGGGTTGCGGGCACTTGATAGAAACCGACCCTTGGAGCAGCAGAATCTAATTGAATGGGCTAAGCCTTCTCTGTCTGATAAAAGAAAGTTGAAAAGCATAATGGATGAGAGAATAGAGGGTCAGTATTCAACCAAGGCAGCAATGAAAGCAGCACATTTAACTCTAAAATGCCTTCAACGTGACCATAGAAAACGTCCTCCCATGAAAGATGTTCTGGAAACATTGGAACGCATAGAACTTATAAAGGATAGAAGGAAATAACCAAAGAAACAATGTTCTATGCTTCCAACTTTGTTCAGTTCTCATTACCCAATTTATCCTCCTTCTGTTTGGCCCTTCATCAGAAAGATATTGCTTCAACATGTGTACTCAGCATTTAGTTAA

>Vu_35140.1
ATGGGTCTCTGCTTTTCTTCCGGCGCTCCTAGCCAAACACCCTCTAATTCTCTTCACTATTCTGGTTCAGGGCGTGAAGGCGAAAGTGTTAATGGAGGAAGCAGTAGCGTTAGCAGTATCAGTGGGAACAACGTTGTGTTTCCGAGTGTGGAAACAAGGAACTTGAAGCAGTTCAATTTTGCAGAGCTGAAAGCTGCAACCAAGGGTTTCAGATCTGATACACTGCTTGGAGAAGGGGGTTTTGGGAAAGTTTACAAAGGGTGGTTGCATGAGGAGACACTGACACCAGCCAAAGCTGGATCTGGAATGGTGGTTGCTGTTAAGAAATTGAACTCAGAGAGCGTGCAGGGATTTCGAGAGTGGCAGTCTGAAATCAATTTTTTAGGAAGAGTTTCTCACCAAAACCTGGTGAAGCTTTTGGGTTACTGTTGTGACGATGTGGAATTTCTACTTGTGTACGAGTTCATGCCAAAGGGAAGCTTGGAGAATCATCTCTTTAGAAGAAATACGAACACAGAACCACTGTCTTGGGACACCAGACTCAAAATAGCTATTGGTGCAGCTAGAGGCTTGGCTTTCTTACACACCTCAGAAAAGCAAATCATATACAGAGATTTCAAAGCCTCAAATATACTACTTGATGAGGATTACAATGCAAAAATTTCAGATTTTGGTTTGGCCAAATTAGGCCCTTCTGGGGGAGTTTCACACGTGACTACCAGGATCATGGGCACATATGGCTATGCTGCTCCAGAATACATTGCAACAGGACACTTGTATGTGAAGAGTGATGTTTATGGTTTTGGTGTAGTGCTGCTTGAAATTCTTACAGGGTTGCGGGCACTTGATAGAAACCGACCCTTGGAGCAGCAGAATCTAATTGAATGGGCTAAGCCTTCTCTGTCTGATAAAAGAAAGTTGAAAAGCATAATGGATGAGAGAATAGAGGGTCAGTATTCAACCAAGGCAGCAATGAAAGCAGCACATTTAACTCTAAAATGCCTTCAACGTGACCATAGAAAACGTCCTCCCATGAAAGATGTTCTGGAAACATTGGAACGCATAGAACTTATAAAGGATAGAAGGAAATAACCAAAGAAACAATGTTCTATGCTTCCAACTTTGTTCAGTTCTCATTACCCAATTTATCCTCCTTCTGTTTGGCCCTTCATCAGAAAGATATTGCTTCAACATGTGTACTCAGCATTTAGTTAA


Promoter Sequence:
>Vu_35140::LG10:17953165-17955165(-)
TCACTTCATGTCTCCGGTTTCTTGTTAGTGCTATAAACTTTCTACCTCAACCCTTTATTTTATTTTTCTTTATATAAAGCTTACTATTCTTTTTCTTCATCTCTACAAATTCATTAAAAGCACACACAATTTTCTGAGTTTGTCTAGCTTTTATTTTTCAAAATAATATAATTATTTGGCCATAGAGTTAACATTATCTTTTAGGATTAAATACAATTTTGTCCCTTAATTTTATGCAAAAATTGAAATTATTTTATTTTCAAATTTTTGTTTTAATTTAGTATCTAAAGTTTAGAAATTGGTGGATTTAATTTTTTATTAAATTTATTTAGTGATATGTTTCATATAATAACTTTTGAGTTGTTTACACCTTTTAATATATTTTTTTATTTAATGTTAATTAATAAATATTTTTGAAGCGTTAAATAAACTTAATAAAATTTGGTTAAAAAAATTAAATTCATGCATTTTTAAAGATGATGACTAAATTGATAAAAATATTAAATAAATTTAACAAAATTTACTTAAAAGGTTTACATCAACGCATTTTTAATGATGAAGACTAAATTGGTTTAAAGTTTCGAAATGAGATTAATTCTAATTTTCACTGAAAGTTAAAAGAGAAAAAAACACATACTTAATCCTATTTTTTTATGATAATTGTATCTACCAGAATTCACAAAGTGTTATGGGAGATAAATCAAACTTCTCTTCATTCAATACTTTCACATGAAAATAAGATTGATGAAAAAAGTTTCTGTTATATTTTATATTATCTATGAAGATTACTATATCTATCATTCTTCCTTCCCCGCAACACCAATAAAGAGAAACTATTTGTAAAGATTTCATATCAATTAAAAATAAGATAGATAGATTATGTAAATGGATGTCATTTCATTTTACAAATCAATTTTATAAAGTTAAATTAAATTTAAGATCTACTTCTTAAAATCAGAACTATCTAAAATTTATCATAACGAGATTTATTATTTATTGAGTTTATTATATCTCTTATACTATAATAAAATTTATTGTTTTTTTAAGTTATTATATTACGATACATTTAGTTTCACGTCCAAAATATATATCCATACATATAAAAATACGTATTGGAGTTCTATAGTGCAAACATTATTTTAACTTAATGTATTAAAACTTTGGAAAATGATACTTGAACAACCATTTTTGACAACATTTAGACACGCGCACACGTGTCAAAATCTGAGTGGTCCATTTTCATTTAATTTTTCCAACTGGACCACTCAGATTTTGACACATGTGCGCGTGTCTAAATGTTGTCAAAAATGGTTGTTCAAGTATCATTTTCCTAAAACTTTTACATGTACCATATTATTCCCAATATTTATTTAAATAATAAATATTATTTGGAAAATTTCTTTTCATCGTGCATTTATCTTGATAATCAGGACCGGTCTTATTAGTATGCTAAAAGAAGACAAACTGAATACTTCTTACTTTAAGCTTCCAACTATGTAAAGAAGGAATTGACAAAGTTTGAAAGGTCCTAGATCTGTAAAGAACAACACTTAATAAAAAACCAATTCAACCTAACAATAATAAATTTGGAAAAAATTATTTTGACAGTCCATATTTATTCTTATCTCCATCTGAGAACTCTATATAATGTTAATTCAGTTATTTAATTAAAGTATAAATCAAATTATTAAATAAAAATTAATAAAAGTAGTGATAGGATAATAATATATAAGTTTATAAGGGTATCAACATATGACGTTCCTTTTTAAATAAGTTCCTTTTTAAATAAGTTTTTAAGGATATTAACGCATGCGTCCACTGTTATGTAACAAGTAATCGATAGTGATCATTTTCCTATTGCTTTTTGAAAGGCAAAAACGTGATTATAATATCAAAAGGTTCCAATATTTAAAAGGGAATTCGGAGAGTGAAGCTAAACGCGAAACCAACACGCCAAACAAAGACCTTATAAATACCACACAATTCAACAACATCCATTC


Gene Sequence:
>Vu_35140(-)
ATTACTGACGAAACGACCCAACTTATGTAGTCATCCTCAATCCTAAGCACCCATAAGTCCTCGTTTGGTTTCTCAATTAATTCATTCTCCGTTTAACTAATTAACACTCAACATGGGTCTCTGCTTTTCTTCCGGCGCTCCTAGCCAAACACCCTCTAATTCTCTTCACTATTCTGGCAAGTCACCACTGCTTCATATTTCTATAGCTTCATATAAAAACTGAGAGAGAATCAGTGATTTGATGTGATTTGATGTGATTTGTTGGCACAAGCAGGTTCAGGGCGTGAAGGCGAAAGTGTTAATGGAGGAAGCAGTAGCGTTAGCAGTATCAGTGGGAACAACGTTGTGTTTCCGAGTGTGGAAACAAGGAACTTGAAGCAGTTCAATTTTGCAGAGCTGAAAGCTGCAACCAAGGGTTTCAGATCTGATACACTGCTTGGAGAAGGGGGTTTTGGGAAAGTTTACAAAGGGTGGTTGCATGAGGAGACACTGACACCAGCCAAAGCTGGATCTGGAATGGTGGTTGCTGTTAAGAAATTGAACTCAGAGAGCGTGCAGGGATTTCGAGAGTGGCAGGTTAGTTTAATTTTCTATTCTGCTGGTTTTTCAAACTATTCACATGTGCTGTGTTCTGTGATTCTTGTGAAGACTATGTTAAATTTTGATTAATGTTATGCTGCATTGTGGTAACGGAGTTGCATCTAATGTTTGTGACAGCAAACAGCACTTTGTTGTTGAGGCTTTGATTAATGAAACATGATTCATCGAAAAATTTAGTATAAAGGTCAACGCTGATTCAACAACATAATTTTTTAATGACACCGTTGTATGTTATTCATCTTTTTATAATCTAACCAACTCATGCTTCTAATCTAATCATTTTAATAACTTTGTTAAGGAATCTCGTGTTGTTTGAATTAATAAAAGGCTAAAACATGGTCCACAAATTGGGATAGGCACTGCTGCCTAGTAAGAAAGCATTAGACAGATCTTATTAAATACTGCTTTTAAAACATTTTTATTAATTATTGTCATGATAATGGTTAAAGAATAGAAAAAATATTATTTTTTGCCCTTTTATTTTATCTGTACACTTAGAAAGATGACACGTATTAAATAAAGAAATTAAGCTATTTATTTATATTAATATTATTTTGAGCTGATTTATATTATTTACATTGTTATTTCTCTTTTCTTTATTATTGATGTGTACAATACTTCAGAATTTCATATCGATAATAGCAGTTTTAAAAATAAATTAGAAGCTATTTAGTCAATTTTAATTTCTCATGTTAATGAGGGAAAAAGAAGTTATAATCTGTCTTACTTTCAAAAGTTACTTCAGCTTTTTTTTTAAAAACTTTTCCCTTTTCTTTCCATAAAAATTAACCTCCTTATAGAAACAATGTGATACAGATAATAGAAAAAGTATGTGAATAAAAATTATTAATTTTATTCTATAAGCAACATTGATCTATTAAAAACTAACAACCATTTGTATCATATTTTTTTATTAGTTTACGATTCATCTTTTATGTTGGATATTTTGTAAGTACTCACTTATCTACAAAAGCTTAAAATTTTGAGTTTGCACAAATTCCATTCCAACCAGGCTATATGATTTTGTAACATGTTGCTCTGTTTTACATGACAATGCAGTCTGAAATCAATTTTTTAGGAAGAGTTTCTCACCAAAACCTGGTGAAGCTTTTGGGTTACTGTTGTGACGATGTGGAATTTCTACTTGTGTACGAGTTCATGCCAAAGGGAAGCTTGGAGAATCATCTCTTTAGAAGTATGAGCTTGAGACCATTAACGTAATAAAATTTGTTGGTCATGGATTTGTTTTGAGTTTAGCTCATTATGTTTGTGTTTTTGTTTCCAATTAGGAAATACGAACACAGAACCACTGTCTTGGGACACCAGACTCAAAATAGCTATTGGTGCAGCTAGAGGCTTGGCTTTCTTACACACCTCAGAAAAGCAAATCATATACAGAGATTTCAAAGCCTCAAATATACTACTTGATGAGGTTTCTTATTTTTACCTTCTTCCTCTCTTGCATTTCTCTTATATATGCTACTTTTTTCATTACCATGAGAAATAGAAGCCAAAATAAATTAAGTCTGACTTCTGGCTTGGATGCATACCAAGTTTATGAGTTAATGCTATCTTGGAATAAATTTTTCTAAAAAGACTTCTAATGCACGAATCTGATTTTTAACCAAATGTTTGTTCATCTTTTGTAGGATTACAATGCAAAAATTTCAGATTTTGGTTTGGCCAAATTAGGCCCTTCTGGGGGAGTTTCACACGTGACTACCAGGATCATGGGCACATATGGCTATGCTGCTCCAGAATACATTGCAACAGGTGATTGTAATATCTACGCACATGGTTAATTGGTTAGTTTGTGAAGATACTTCTTTGTTGAAACATAAGAAACAGATGATGGTCCTATGTTTCTGATATGTTGTGTTGTGATGGAACAGGACACTTGTATGTGAAGAGTGATGTTTATGGTTTTGGTGTAGTGCTGCTTGAAATTCTTACAGGGTTGCGGGCACTTGATAGAAACCGACCCTTGGAGCAGCAGAATCTAATTGAATGGGCTAAGCCTTCTCTGTCTGATAAAAGAAAGTTGAAAAGCATAATGGATGAGAGAATAGAGGGTCAGTATTCAACCAAGGCAGCAATGAAAGCAGCACATTTAACTCTAAAATGCCTTCAACGTGACCATAGAAAACGTCCTCCCATGAAAGATGTTCTGGAAACATTGGAACGCATAGAACTTATAAAGGATAGAAGGAAATAACCAAAGAAACAATGTTCTATGCTTCCAACTTTGTTCAGTTCTCATTACCCAATTTATCCTCCTTCTGTTTGGCCCTTCATCAGAAAGATATTGCTTCAACATGTGTACTCAGCATTTAGTTAAATACCAATTCTTGTGTAGTTAACTTTAAGTTAGTGTAGGTGGTACACCTGTTGCTGCATGAGTGTTTGTTGATGTAGAGCTTGGTCCACTTGTATGTAAATGTATCTAGTTTCTTCTCATATATTATCATCATTTCATTTAAAT