Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_34905 LG10 15653232 15656460 PREDICTED: proline-rich receptor-like protein kinase PERK4
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/A 15653598 missense_variant p.Pro123Thr
C/T 15653675 synonymous_variant p.Ser148Ser
G/T 15653679 missense_variant p.Asp150Tyr
A/G 15653680 missense_variant p.Asp150Gly
A/C 15653693 synonymous_variant p.Ala154Ala
G/A 15653813 synonymous_variant p.Gly194Gly
G/C 15654115 downstream_gene_variant
A/G 15654145 splice_region_variant&synonymous_variant p.Glu196Glu
A/G 15654263 downstream_gene_variant
T/A 15654359 missense_variant p.Ser258Thr
T/C 15654434 missense_variant p.Trp283Arg
A/G 15654711 downstream_gene_variant
T/C 15654712 downstream_gene_variant
G/A 15654749 downstream_gene_variant
T/A 15654765 downstream_gene_variant
A/C 15654821 downstream_gene_variant
A/T 15654823 downstream_gene_variant
T/C 15654889 downstream_gene_variant
G/A 15654926 downstream_gene_variant
T/C 15655014 downstream_gene_variant
A/T 15655052 downstream_gene_variant
A/G 15655091 downstream_gene_variant
G/A 15655243 downstream_gene_variant
T/A 15655287 downstream_gene_variant
T/A 15655412 downstream_gene_variant
T/A 15655459 downstream_gene_variant
C/G 15655464 downstream_gene_variant
T/C 15655487 downstream_gene_variant
G/C 15655504 downstream_gene_variant
T/C 15656015 synonymous_variant p.Leu528Leu
A/G 15656053 synonymous_variant p.Arg540Arg
G/C 15656183 downstream_gene_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_34905.1
MSSSPHNSSPDNEIPDDSTPDNSTPDNSTPDDADNSSSTPSNSSPPPSPPPPSSPPPSPPQSSSSPPPPTPSEKSSPSPPTSTNPSPPSPNTSPQTPSPPASSHSPPSFKSPTPPHKSLQPPPASKNSGSGSSGSGKHGNSDSSDRGSHDNSKAIVGAVLGVGSVLLVLVIVCVICSRKKKKKRMYYYGEQSFGKGNNNYYNSGQHQGYYGGPHGDHVVRVQNGMVPGGGGGWGAPPPPMMHSADMSSNYSTGPPPLPPPSPTLALGLKGGTFTYEELSAATNGFADSKLIGQGGFGYVHMGVLPNGKEVAVKSLKAGSGQGEREFQAEIDIISRVHHRHLVSLVGYSISGGQRMLVYEFIPNKTLEYHLHGKGRPTMDWPTRMRIAIGSAKGLAYLHEDCHPRIIHRDIKAANVLIDDSFEAKVADFGLAKLTTDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDHTSAMDDSLVDWARPLLNRGLEEDGNFGELVDPFLEGNYNPQELARMAACAAASIRHSSKKRAKMSQIVRILEGDVSLDDLKDGMKTGQSTVFNSSSGSDQYDTMQYNADMEKFRKAVFSSQEFGTSSGGSSSEVSQKQRL*


CDS Sequence:
>Vu_34905.1
ATGTCTTCCTCTCCTCACAACAGTTCTCCAGATAATGAAATACCTGATGATTCCACCCCAGACAACAGCACCCCGGACAACAGCACCCCTGATGACGCTGACAACTCATCTTCAACACCATCAAATTCATCACCGCCACCATCTCCACCGCCACCTTCATCGCCACCTCCATCTCCTCCACAATCATCTTCATCTCCACCTCCGCCAACCCCATCAGAAAAGTCCTCTCCTTCCCCTCCAACATCAACCAATCCAAGCCCGCCATCACCCAATACTTCCCCACAGACACCTTCTCCACCCGCTTCATCACACTCTCCTCCCTCTTTTAAATCACCCACTCCTCCACACAAATCATTGCAACCTCCACCCGCTTCAAAAAATAGTGGCAGTGGCAGTAGCGGTAGTGGTAAACATGGAAACAGCGATAGCAGTGATCGTGGCAGCCACGATAACAGTAAAGCAATAGTTGGAGCAGTGCTTGGGGTGGGGAGCGTGCTTCTTGTTTTGGTCATCGTCTGCGTTATCTGTTCCAGGAAGAAGAAAAAGAAGAGAATGTACTATTACGGAGAGCAATCATTCGGGAAAGGGAATAACAACTATTACAATAGTGGGCAACACCAGGGTTATTACGGAGGTCCACACGGGGACCATGTTGTGAGGGTGCAAAACGGAATGGTTCCCGGTGGTGGTGGTGGGTGGGGTGCACCACCTCCTCCTATGATGCATAGCGCTGATATGAGCTCCAACTACTCGACGGGACCACCCCCTTTGCCTCCTCCCTCACCAACCCTTGCTCTAGGCCTCAAAGGTGGCACCTTTACTTATGAGGAACTATCTGCTGCCACCAATGGATTCGCTGATTCAAAACTGATAGGACAGGGTGGCTTCGGTTATGTCCACATGGGTGTGTTGCCTAACGGAAAGGAAGTGGCAGTTAAGAGTCTAAAAGCAGGAAGTGGACAGGGAGAACGAGAGTTCCAAGCTGAGATTGACATCATCAGTCGTGTCCATCATCGCCATCTTGTGTCACTCGTTGGATACTCTATTTCTGGCGGCCAGAGAATGTTGGTCTATGAATTTATTCCCAATAAAACCTTGGAATATCACCTTCATGGAAAGGGAAGGCCTACAATGGATTGGCCTACCAGAATGCGAATTGCGATAGGATCAGCCAAAGGACTGGCTTATCTTCATGAAGATTGTCATCCTCGTATAATCCATCGTGATATTAAAGCTGCGAATGTCCTCATTGATGATAGCTTCGAGGCAAAGGTTGCTGATTTTGGATTGGCTAAGTTGACCACCGATAATAATACTCATGTATCGACTCGAGTCATGGGAACTTTCGGGTACCTAGCCCCAGAATATGCATCAAGTGGAAAATTGACTGAGAAGTCTGACGTTTTCTCATTTGGGGTCATGCTATTGGAGCTCATAACTGGGAGGCGACCTGTGGATCACACAAGTGCCATGGACGACAGCTTAGTAGATTGGGCTCGACCACTACTGAATCGTGGATTGGAAGAGGATGGCAACTTTGGAGAGTTGGTTGATCCATTCTTGGAGGGAAACTACAATCCTCAAGAATTGGCTAGGATGGCAGCTTGTGCTGCTGCTAGCATTCGACATTCTTCCAAGAAACGTGCAAAAATGAGCCAGATTGTAAGAATATTGGAAGGAGATGTGTCGCTGGATGATTTGAAAGATGGGATGAAGACAGGGCAGAGTACTGTTTTCAATTCTTCATCTGGGTCAGATCAGTATGATACAATGCAGTACAATGCAGACATGGAAAAGTTTAGAAAGGCAGTGTTTTCTAGCCAGGAATTTGGCACGAGCAGTGGTGGCTCTAGTAGTGAAGTGAGCCAGAAACAGAGGCTTTAG


Promoter Sequence:
>Vu_34905::LG10:15651232-15653232(+)
TCTCTCGCGCTCAAAGCACAACACAGAACTATGAACGCTTCAAGGATGCTGCTGTCGTCTCCACTATCGAGCTGCCACGTGGTGCGCGGGAAGCTTTTTCCGGAGTCAATTAGAAGGCGCAGTTGTTGTTCTCCTCCGCCGCTGAAAATAGCGAGCATGGCGAAGGATGGCAGCGACGCCAGCAGCAACGGCGGCATCATTGAAAAAGTAGCCATAGGAGGTGGATTGATCTCAACCCCAGTAATCGCTTGGTCTCTCTACACTCTCAAAACAACCGGTTGCGGTTTGCCCCCCGGTCCAGGTGGCTCGATCGGTGCCCTGGAAGGAGTGAGCTACCTGGTTGTTGTGGGCATAGTGGGTTGGTCACTCTACACTAAAGCCAAAACCGGTTCTGGACTTCCCAACGGTCCTTTTGGTTTGTTGGGTGCTGTTGAAGGCCTTTCCTTTTTGTCTTTGCTTGCCATTGTGGTTGTCTTCGGGTTGCAGTACCTTGACAAGGGTTTCATCCCTGGTCCTCTCCCCGCAGATCAGTGTTTTGGCTAGGTTTTGCAGTAACCTTTCCATAATGTAACATGAGCCACTACAATCTTATCCTTCTACTTGTGGATAAGCTCGTAACATGTGTCTTACAATATCCTAATATGCGTCTCTATTTTCCTTTTAAGACTTCAGAGCATAAAATGGAAATTAATTGTTTGTGTTTTTCTTTAGGATTATACTCCCTTGTTCACAACCACATAAAATAGGCAAAAAAAAATGTTCAGTTTAAGAGGATGGAGATGGTTTTTGAATACAAAATTTACACGTTTATGTTTAATTTGTTCTGTGTAGAACGAAATGACTTGTTTTTAAACGAAGGTGTAAAGAATGGACCCAGCAAAGAACGAAATTTGTCCATATTTTTTTTCAAAGAAGTTACTAGTTCTTGTGTTTTGGGTTAAACACGGCTAAGATTCTGTCGTTATGTTTTCATATACATAAATTAGTCTTCAAACTTTTAAAAAACACAACTTTAGTCTCTCTTACTTTCAAAAACATGATTATATTTTAGAATGAAGAGACTAATGACCTGTTTAGCGAAAGTTTTCCTCCTCTGACCTGTGTTCAATGTTCAATATCTTGTTAAAAGCTGTGTTCAAACATATCTAGAGTATTATCTCAAAAAGGGGATAAATAGGGAAAAAAGAAGGGTTAACATTGCTAATATGCTATAAATGGGATTGTGGGATAGTTAACAATGCGAAAAATATATATTAAGTAGTGTAGTAATTTATGGTGATTTACTTCTCATACTGAAATAAAGCCTATTAAAGTTTAAAATGTTATTTTTAGTGAATATATGCAAGTGTTTTTGGTAAGGTATTTCAAGGTAAAATGTGGTATGAGTGAGCAGAATCCTGTAAGGGAATTATGGCCGAACATGGGATAACAGAAGGAAGACCAGCCAAAAATGGTAAAAGCTATAACTGATTCAAACTAAGCAAAAGGTGGCAGAGAGAAATGCATTGATTGAGAAAAACATAGGTCCTCCTTTGTAGGAGACCATTGAGGAATAACAGCAAAACCTCCTTTCGTATTATGGACTTTTTAGCATGCAACACGTTTCTCTTTTTCTTTCTGTTGAGAACCCCTGTTTTCTTCCAATCAGGTACATTTCCTCCTTGAGAAACAAAACACTTCTCCCCACGACACTTCAATCCCATAATCTAGGAACACAAATTCCATTAGTAATTCAAGATAGAAACACCAATAAACATAGTAGTAACCTGGTTTTGACTTTTCTGTAGGTTAATTGATCATTTCGCATTCATCTACATGCTTCTAACTAACATGCATTCACATTTTTTTACCATAACTCGTTAATCATTCCTACCACTTGTTCTTTTCAGGGGTCCAACCGTTTGTAGGTGGTGTTTCCGGCAACGTGCTCTTCTGGATACAAACCTTTGGCCGGAAACCATAATTATGTGCTTCATGTGAATTCTGAGATACAGTAACAA


Gene Sequence:
>Vu_34905(+)
ATGTCTTCCTCTCCTCACAACAGTTCTCCAGATAATGAAATACCTGATGATTCCACCCCAGACAACAGCACCCCGGACAACAGCACCCCTGATGACGCTGACAACTCATCTTCAACACCATCAAATTCATCACCGCCACCATCTCCACCGCCACCTTCATCGCCACCTCCATCTCCTCCACAATCATCTTCATCTCCACCTCCGCCAACCCCATCAGAAAAGTCCTCTCCTTCCCCTCCAACATCAACCAATCCAAGCCCGCCATCACCCAATACTTCCCCACAGACACCTTCTCCACCCGCTTCATCACACTCTCCTCCCTCTTTTAAATCACCCACTCCTCCACACAAATCATTGCAACCTCCACCCGCTTCAAAAAATAGTGGCAGTGGCAGTAGCGGTAGTGGTAAACATGGAAACAGCGATAGCAGTGATCGTGGCAGCCACGATAACAGTAAAGCAATAGTTGGAGCAGTGCTTGGGGTGGGGAGCGTGCTTCTTGTTTTGGTCATCGTCTGCGTTATCTGTTCCAGGAAGAAGAAAAAGAAGAGAATGTACTATTACGGAGAGCAATCATTCGGGAAAGGTAACCAACCAAAACCGTTACAATTTCTTGCTTGGCTTTCATGCATATCATGCACAGGCACCATCAGATGATAATCAATACTAACAAATCTTTCCATGAATTTTTCATCCCACATTGCCCAAATGGTTCACTTTATTTCTTCGTTGCGACAAATAGTACCCCTGAAAACCTGCGAGAGGGGTCTCGGGGTATAAGAAATAAAAGGATACCATTTTTGTTTTTCTAACTGGAACTGTGTTTCAAAATTATGTCTGTTTGTTTGTCTCTCATCACAGTTGTATACTGCTGTTGATTTCTGATGTTCATAATTAATGGTCTCTACAGGGAATAACAACTATTACAATAGTGGGCAACACCAGGGTTATTACGGAGGTCCACACGGGGACCATGTTGTGAGGGTGCAAAACGGAATGGTTCCCGGTGGTGGTGGTGGGGGTGGGGGTGGAGGTGGTGGTGGAGGTGGGTGGGGTGCACCACCTCCTCCTATGATGCATAGCGCTGATATGAGCTCCAACTACTCGACGGGACCACCCCCTTTGCCTCCTCCCTCACCAACCCTTGCTCTAGGCCTCAAAGGTGGCACCTTTACTTATGAGGAACTATCTGCTGCCACCAATGGATTCGCTGATTCAAAACTGATAGGACAGGGTGGCTTCGGTTATGTCCACATGGGTGTGTTGCCTAACGGAAAGGAAGTGGCAGTTAAGAGTCTAAAAGCAGGAAGTGGACAGGGAGAACGAGAGTTCCAAGCTGAGATTGACATCATCAGTCGTGTCCATCATCGCCATCTTGTGTCACTCGTTGGATACTCTATTTCTGGCGGCCAGAGAATGTTGGTCTATGAATTTATTCCCAATAAAACCTTGGAATATCACCTTCATGGTAACTACTACATATATGCATTCTTTCAATCTATGTCACTTTAGCTTTCGCTTCAACTGTTGTATTTCAAATTTCATTTCAAGGACAATTGTGAAACCATAACCCTCAAGTTTACACACACACACAAACACATATATATAAGTTTAACATGAAAGAAAACCTTTTAGTGATGTAAAACAACTATAGAAATTTTCTATAGTAATGATAAACTGCAACAAAAATTTGTGCAAAGACTAAAACTTAAGGTTTTTTGAATTGGAACTAAAATTTAGAATGGGAACATTTGCAAAAAGCACTGAGTGAATACTAGTATTTAGATCTGAGACTTGTAATGCCGCTGGTGCGAGTTACTAGTGAGATTTTTCTGACTTCTTTTGCTGTGAGCACCTGCAAGCAAAATTGCTAATGTATTATATGGTTCTATTCAGGAAAGGGAAGGCCTACAATGGATTGGCCTACCAGAATGCGAATTGCGATAGGATCAGCCAAAGGACTGGCTTATCTTCATGAAGATTGTAAGAGAGTCACAACCCTCTAGATTATGATCTTTCTTTTTTTATTCATTTTATTCTGTATTTACATTTTCTTTTAAATTTTTGCTGTATCTCTTTAGGTCATCCTCGTATAATCCATCGTGATATTAAAGCTGCGAATGTCCTCATTGATGATAGCTTCGAGGCAAAGGTTCGACATAATTACATATTTTATCTATTTCATTAGTTTACATAGACAATTTACCTACTTAATTATCATCACACATGTTGCGAATCTTATGTTGTCGAGCTAATTGAGTTTGGCAACAACGCATTCATTCAGGTTGCTGATTTTGGATTGGCTAAGTTGACCACCGATAATAATACTCATGTATCGACTCGAGTCATGGGAACTTTCGGGTTATTTCTCATCACCATATGGTTTCATCCCTGTAAAAACTTCAATAAAGAAATGGTTTTTGCTGACGATATGCATGCTGACACAGGTACCTAGCCCCAGAATATGCATCAAGTGGAAAATTGACTGAGAAGTCTGACGTTTTCTCATTTGGGGTCATGCTATTGGAGCTCATAACTGGGAGGCGACCTGTGGATCACACAAGTGCCATGGACGACAGCTTAGTAGATTGGGTTGGTATCATCTTCATCTAAGACTCCATCATTTTTCCTATAACATTTTTTTTTTTCTGGTTGAACTAATTACAACTTTTGGGAACCTATGAACCTAGGCTCGACCACTACTGAATCGTGGATTGGAAGAGGATGGCAACTTTGGAGAGTTGGTTGATCCATTCTTGGAGGGAAACTACAATCCTCAAGAATTGGCTAGGATGGCAGCTTGTGCTGCTGCTAGCATTCGACATTCTTCCAAGAAACGTGCAAAAATGAGCCAGGTATGTATGAGTCATACAGAGATCACATCAACGTTGATTAATGCCATATAAGTGAACAAAACAAAATAAAACGTTCCCTTTTATAGTGACTAATTGGATTCATATTCGATTAAAGTACATAATTTAGTTACTTACGAGTTTATGTGCAGATTGTAAGAATATTGGAAGGAGATGTGTCGCTGGATGATTTGAAAGATGGGATGAAGACAGGGCAGAGTACTGTTTTCAATTCTTCATCTGGGTCAGATCAGTATGATACAATGCAGTACAATGCAGACATGGAAAAGTTTAGAAAGGCAGTGTTTTCTAGCCAGGAATTTGGCACGAGCAGTGGTGGCTCTAGTAGTGAAGTGAGCCAGAAACAGAGGCTTTAG