Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_34876 LG10 15418586 15420166 PREDICTED: BES1/BZR1 homolog protein 2-like
Map

Annotations  
category   relationship type   keyword
Pathway   B 09132 Signal transduction   C 04075 Plant hormone signal transduction [PATH:ko04075]
SNP Position Effect Amino acid change
C/T 15418697 5_prime_UTR_variant
G/A 15418743 5_prime_UTR_variant
A/C 15418790 5_prime_UTR_variant
G/T 15418844 missense_variant p.Arg9Leu
C/T 15419058 intron_variant
C/T 15419061 intron_variant
T/A 15419134 intron_variant
G/A 15419150 missense_variant&splice_region_variant p.Gly76Arg
G/A 15419184 missense_variant p.Gly87Asp
C/T 15419185 synonymous_variant p.Gly87Gly
T/A 15419199 missense_variant p.Ile92Lys
C/T 15419205 missense_variant p.Ala94Val
G/A 15419215 synonymous_variant p.Ser97Ser
C/G 15419222 missense_variant p.Pro100Ala
C/T 15419235 missense_variant p.Ser104Phe
C/T 15419253 missense_variant p.Pro110Leu
A/T 15419254 synonymous_variant p.Pro110Pro
A/G 15419279 missense_variant p.Thr119Ala
T/A 15419291 missense_variant p.Phe123Ile
C/T 15419294 missense_variant p.Pro124Ser
C/T 15419296 synonymous_variant p.Pro124Pro
G/A 15419388 missense_variant p.Arg155Lys
C/A,T 15419395 synonymous_variant p.Ser157Ser
A/T 15419397 missense_variant p.Asn158Ile
C/G 15419413 synonymous_variant p.Thr163Thr
C/A 15419420 missense_variant p.Leu166Ile
C/G 15419424 missense_variant p.Ser167Cys
C/T 15419432 stop_gained p.Arg170*
G/A 15419433 missense_variant p.Arg170Gln
T/A 15419481 missense_variant p.Phe186Tyr
G/A 15419484 missense_variant p.Arg187His
C/A 15419485 synonymous_variant p.Arg187Arg
T/A 15419491 synonymous_variant p.Pro189Pro
C/T 15419505 missense_variant p.Ser194Phe
G/A 15419507 missense_variant p.Ala195Thr
C/A 15419508 missense_variant p.Ala195Asp
C/T 15419514 missense_variant p.Ser197Phe
A/G 15419516 missense_variant p.Ser198Gly
G/A 15419517 missense_variant p.Ser198Asn
T/C 15419518 synonymous_variant p.Ser198Ser
C/T 15419519 missense_variant p.Pro199Ser
C/T 15419523 missense_variant p.Ser200Leu
G/A 15419524 synonymous_variant p.Ser200Ser
C/T 15419534 missense_variant p.His204Tyr
C/T 15419536 synonymous_variant p.His204His
T/C 15419538 missense_variant p.Val205Ala
C/G 15419539 synonymous_variant p.Val205Val
C/A 15419544 missense_variant p.Thr207Asn
A/C 15419549 missense_variant p.Thr209Pro
C/T 15419551 synonymous_variant p.Thr209Thr
A/G 15419552 missense_variant p.Ile210Val
C/G 15419554 missense_variant p.Ile210Met
C/T 15419555 missense_variant p.Pro211Ser
G/T 15419558 stop_gained p.Glu212*
T/G 15419561 missense_variant p.Cys213Gly
G/A 15419567 missense_variant p.Glu215Lys
C/T 15419572 synonymous_variant p.Ser216Ser
G/A 15419594 missense_variant p.Ala224Thr
C/T 15419598 missense_variant p.Ser225Phe
G/A 15419600 missense_variant p.Gly226Ser
G/A 15419601 missense_variant p.Gly226Asp
T/A 15419610 missense_variant p.Val229Asp
G/T 15419621 missense_variant p.Gly233Cys
G/A 15419626 synonymous_variant p.Gln234Gln
C/T 15419632 synonymous_variant p.Pro236Pro
G/A 15419633 missense_variant p.Ala237Thr
C/T 15419635 synonymous_variant p.Ala237Ala
C/T 15419641 synonymous_variant p.Pro239Pro
C/T 15419649 missense_variant p.Pro242Leu
C/A 15419671 synonymous_variant p.Pro249Pro
A/C 15419675 missense_variant p.Met251Leu
G/T 15419683 missense_variant p.Gln253His
C/T 15419686 synonymous_variant p.Ile254Ile
G/A 15419695 synonymous_variant p.Gln257Gln
G/A 15419702 missense_variant p.Val260Ile
C/G 15419707 missense_variant p.His261Gln
C/T 15419721 missense_variant p.Ala266Val
G/A 15419723 missense_variant p.Glu267Lys
G/A,* 15419733 missense_variant p.Arg270Lys
A/*,G 15419737 synonymous_variant p.Gly271Gly
T/A,* 15419761 missense_variant p.Asn279Lys
G/A 15419763 missense_variant p.Gly280Asp
G/A 15419766 missense_variant p.Arg281Lys
G/A 15419778 stop_gained p.Trp285*
G/A 15419782 synonymous_variant p.Glu286Glu
G/A 15419790 missense_variant p.Arg289Lys
T/C 15419793 missense_variant p.Ile290Thr
C/T 15419797 synonymous_variant p.His291His
A/G 15419858 3_prime_UTR_variant
G/A 15419878 3_prime_UTR_variant
A/G 15419981 3_prime_UTR_variant
A/C 15420042 3_prime_UTR_variant
C/T 15420129 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_34876.1
MTGGGSTGRMPTWKERENNKRRERRRRAIAAKIYAGLRAQGNYKLPKHCDNNEVLKALCAEAGWIVEEDGTTYRKGCKRPTGSEIGGTPPNISACSSIQPSPQSSSFPSPVPSYHASPTSSSFPSPTRIDANPSSFLIPFIRNITSIPANLPPLRISNSAPVTPPLSSPRTSKRKADFDSLSNASFRHPLFATSAPSSPSRRHHVATSTIPECDESDASTVDSASGRWVSFHGQTPAGPPSPTFNLMKPAMHQIAPQEGVHWGSVAEIGRGVSDFEFENGRVKPWEGERIHEVGMDDLDLTLGFGKA*


CDS Sequence:
>Vu_34876.1
ATGACCGGCGGCGGATCGACGGGGCGGATGCCGACGTGGAAGGAGAGGGAGAACAACAAGAGGAGAGAAAGAAGACGGAGAGCGATTGCTGCCAAGATCTACGCCGGCCTTCGAGCTCAGGGTAACTACAAGCTTCCCAAACACTGCGACAACAACGAGGTCCTCAAAGCTCTTTGCGCAGAAGCTGGTTGGATCGTGGAAGAAGATGGCACTACCTACAGAAAGGGATGCAAGAGACCCACGGGAAGTGAGATTGGAGGCACTCCACCCAACATAAGCGCGTGTTCCTCGATTCAGCCAAGTCCACAATCTTCGTCATTCCCGAGTCCAGTGCCTTCCTACCACGCTAGTCCAACCTCTTCCTCCTTCCCCAGCCCCACTCGCATTGACGCAAACCCCTCTTCCTTTCTCATCCCATTCATCCGCAACATAACTTCAATCCCCGCCAACCTTCCCCCTCTCAGGATATCCAACAGCGCCCCTGTCACCCCACCTCTTTCCTCTCCCCGAACCTCCAAGCGCAAGGCTGACTTCGATTCCCTCTCCAACGCTTCCTTCCGCCACCCTCTTTTCGCCACCTCCGCCCCCTCCAGTCCCTCGCGCCGCCACCACGTCGCGACTTCCACCATCCCCGAGTGCGACGAGTCCGACGCTTCCACCGTCGACTCTGCCTCCGGCCGTTGGGTTAGTTTTCACGGTCAGACCCCCGCCGGTCCCCCTTCCCCTACTTTCAACCTCATGAAACCCGCTATGCACCAGATCGCTCCTCAGGAGGGCGTACACTGGGGTTCCGTTGCGGAGATAGGCAGAGGAGTCTCCGATTTTGAATTCGAGAATGGCAGAGTAAAGCCTTGGGAGGGTGAGAGAATACACGAGGTGGGAATGGATGATTTGGACCTTACTCTCGGATTCGGAAAAGCTTGA


Promoter Sequence:
>Vu_34876::LG10:15416586-15418586(+)
AGGAGGTCCTAGTCTTGGGTGCTTCCATATGATCCAAGGTGAGTGATAACGGATTAACCTCGTGACTGTGGCCGGGCGGTAGTGCCCAAGTTCCATAAGGCGGTAGTGCCAAGTTCCATAAGGTGGTAGTGCCAAGTTCCATAAGGCGGTAGTGCCAAGTTCCATAAGGCGGTAGTGCCAAGTTCCATAAGGCGGTAGTGCCAAGTTCCATAAGGCGGTAGTGCCAAGTTTCACAAAGCGGTAGTGCCAAGTTTCATAAGGCGGTAGTGCCAAGTTTCATAAAGCCACCACGAGTGCAAGACCCGCCATAGCTCGGTAATCATTCTAGTCCGGACGAGTCGGGTTATAAAGTAACAAGTCTTGTGATGTCAATTTACCATGTGTATCAAAGTAATGGATGAGTATGTATGATGTGATTGTTGTATGATGGTATGAGTATGTATGACATAATTATTATATGAGGTTTGCATGCATGTTTCATAAATGATTGGTTGCATGTTAGCTCACCCTACTTGTTTGTGTTTGGGTATGTGCGATGATCGTATAATTCGTTATACGGGAGCAGATGGCAAGGAGGATACGTTGGAAACAGTACTTGATGGGGAAGACAATGTTGCAGCTTAGATTCGCTAGCTTTTATTAGTTAGCTTTGATGGACTTTTGTACGTTTAAAGCTTTAAATTCTATGTAATTTCTAGGGAGAAACCCTATTACTCTAAGTTTTCAATTCCATGCTATTCTAAGGATGATTGTAATCCTTAAATTACTCTTGACTGCTTTCCTATATTAATAAATGATGACGTCTTTATTATATATGTTTTATATATATAATTGGGATGTCACAATTGACCACATAAGGAAGGACATAGAACAATAAATCCCAAAACGTATGATTATGTAGCATAATTTAAACTTACGTTCATTTATTTCTTTGTTAAAAATTAGTTAATGTACTACATATATTGATTCTTTTGGTAAGAAACACCTTTAAATATATATTTTAAAGAGTTTTTCTTCTTAGAAATAATTTTAACATTTTGTTTCATAAAACTTATCAAAAGATCCATAATTAAGTATTAAAAGTTACAGAACTCCACACATGATTATTACATTTAATCTATGTTATGAACCAAGTCAATTTATAAAAGAAAAAAAGAATATGTGTTATCCCACAGAAAAAGTAAAAGAAAAGAGAATATCTATTGTAAAAATAAAATAAAATAAAGACCTCAAGTAATTTTGTTTGAGAAAAATAATTTTTAATACAACATTTATTGTTTTACATAAAATTGAAATACAAGAGTTATAAAGAGAATATCACTTAAGAAAAGGAAGAAAGAGTATAATTAAGACACAAACTAATTTTGTTATAATAAGGGTTAAGGAAAAAAAAAACTACTAAATAAAAAAAATCCAAGTAAAAAGGGTAAAAAGATGAGATGAACGAAAGAGTAATAACAGATATACATGAATCAACAGTATACATTTATTTAACACCAACAATATAATAATATATTCTTAAAATAAAAATAATTCAAGAAGAATTATCTGGAGACCTAAAATTATTATTTTTTATTAAATATTTTAGGGTTAAATATGTTTTTAGTCCCTAAACTATTGACCGTTTCTGGTTTTCGTCCCTCTTCCAAAGTAAGGTACAATTTAGTCCTCAATCTTTAAAAAACGTTCGTTTTAGTCGAAAAAACGAACGTTTTGAGGACTAAAACGAGGACTAAAAACAAAATTTTGAGGACTAAAACGAACGTTTTTCTAAAGAATGAGGACCAAATTGTACCTTACTTTGGAAGAGGGACGAAAACCAGAAACGGCCAATAGTTTAGGGACTAAAAACATATTTAACCCAATATTTTATAGGTGTAGAAAAATTGAAGAATGTACATCTCAAATATTTCAAAACAAAATTGAAGTGTTATTCCATAATTTTCTTCTCAGACTTTCCTGAAATAATATATATTCGTGTGGGCGTGTGAAAAAAAAGA


Gene Sequence:
>Vu_34876(+)
AATCAGCGAAGTGAAAACTACGGCAGTAGGAAAAGGGTGGGATAGAGAAGAGAAGAGAAGAGCGCAAGAGAAGCAACAACCTTTCCATCTCTCTCTTCATCTGCAGTGGCCCAAAGAAACTTGAATCAAACTCGCTCAGGTTTTGTTCTAGTCACGCGCACACAGCACACGCACAGCTCCTCTACTTTTTGTGACGCAGAGGAAAACAGAACGGACTTAGGTTCGCCGGAACGATGACCGGCGGCGGATCGACGGGGCGGATGCCGACGTGGAAGGAGAGGGAGAACAACAAGAGGAGAGAAAGAAGACGGAGAGCGATTGCTGCCAAGATCTACGCCGGCCTTCGAGCTCAGGGTAACTACAAGCTTCCCAAACACTGCGACAACAACGAGGTCCTCAAAGCTCTTTGCGCAGAAGCTGGTTGGATCGTGGAAGAAGATGGCACTACCTACAGAAAGGTAAAACTCGATAACCACTCGTCTCATCACATCACAGGCTCAGATCTGCGATCACTCTTTCTCCACGATAATGGATAATTAATTATTACCTTTTATGTTGACACAGGGATGCAAGAGACCCACGGGAAGTGAGATTGGAGGCACTCCACCCAACATAAGCGCGTGTTCCTCGATTCAGCCAAGTCCACAATCTTCGTCATTCCCGAGTCCAGTGCCTTCCTACCACGCTAGTCCAACCTCTTCCTCCTTCCCCAGCCCCACTCGCATTGACGCAAACCCCTCTTCCTTTCTCATCCCATTCATCCGCAACATAACTTCAATCCCCGCCAACCTTCCCCCTCTCAGGATATCCAACAGCGCCCCTGTCACCCCACCTCTTTCCTCTCCCCGAACCTCCAAGCGCAAGGCTGACTTCGATTCCCTCTCCAACGCTTCCTTCCGCCACCCTCTTTTCGCCACCTCCGCCCCCTCCAGTCCCTCGCGCCGCCACCACGTCGCGACTTCCACCATCCCCGAGTGCGACGAGTCCGACGCTTCCACCGTCGACTCTGCCTCCGGCCGTTGGGTTAGTTTTCACGGTCAGACCCCCGCCGGTCCCCCTTCCCCTACTTTCAACCTCATGAAACCCGCTATGCACCAGATCGCTCCTCAGGAGGGCGTACACTGGGGTTCCGTTGCGGAGATAGGCAGAGGAGTCTCCGATTTTGAATTCGAGAATGGCAGAGTAAAGCCTTGGGAGGGTGAGAGAATACACGAGGTGGGAATGGATGATTTGGACCTTACTCTCGGATTCGGAAAAGCTTGATTTGTTCTCAACAACTACCTTAAAGAATCGCAGATGCAATTGCAATCCTCTCCATTTGCTTTCTTCCGGCAATTAATTGGTTGTTATTCATATATTTATCTATTTTCTCTCTAATTATGTGTACAGTCTCTTATATACCAGTGGTTAGGTGTTCTATTACATCATGGAATTTGACTCATTAAAATGCCTTTTTAATTGTTCAAAGGTTGCATTAGAAGCAATCTTCTCCAAGTGTTTTCTTCAGACTTTTAATCTTCACTTTCTAAGACTCGGAAAAACTCGGTGATATTCTTAATTTTATCCTCTTATTCATTATTC