Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_34875 LG10 15399625 15401220 hypothetical protein
Map

Annotations  
category   relationship type   keyword
Pathway   B 09132 Signal transduction   C 04075 Plant hormone signal transduction [PATH:ko04075]
SNP Position Effect Amino acid change
G/C 15399885 synonymous_variant p.Ser6Ser
A/G 15399891 synonymous_variant p.Gly8Gly
A/C 15399892 synonymous_variant p.Arg9Arg
C/G 15399900 synonymous_variant p.Pro11Pro
A/G 15399908 missense_variant p.Lys14Arg
G/T 15399915 missense_variant p.Arg16Ser
A/T 15399923 missense_variant p.Asn19Ile
C/T 15400074 synonymous_variant p.Asp69Asp
C/T 15400079 missense_variant p.Thr71Ile
C/T 15400083 synonymous_variant p.Thr72Thr
G/A 15400093 splice_donor_variant&intron_variant
C/T 15400110 intron_variant
A/T 15400123 intron_variant
T/C 15400124 intron_variant
C/A,T 15400127 intron_variant
G/A 15400206 missense_variant p.Arg78Lys
C/T 15400294 synonymous_variant p.Phe107Phe
C/T 15400295 missense_variant p.Pro108Ser
G/A 15400556 missense_variant p.Ala195Thr
A/T 15400707 missense_variant p.Asn245Ile
T/A 15400710 missense_variant p.Leu246His

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_34875.1
MTGGGSTGRMPTWKERENNKRRERRRRAIAAKIYAGLRAQGNYKLPKHCDNNEVLKALCSEAGWIVEEDGTTYRKGCRRPTGSEIGGTPPNISACSSIQPSPQSSSFPSPVPSYHASPTSSSFPSPTRIDANPSSFLIPFIRNITSIPANLPPLRISNSAPVTPPLSSPRTSKRKADFDSLSNASFRHPLFATSAPSSPSRRHHVATSTIPECDESDASTVDSASGRWVSFQGQTAAGPPSPTFNLMKPAIHQIPAQEGVQWGSVAEIGRGVSDFDFEHGRVKPWEGERIHEVGMDDLELTLGFGKA*


CDS Sequence:
>Vu_34875.1
ATGACCGGAGGCGGATCGACGGGAAGGATGCCCACGTGGAAGGAGAGGGAGAACAACAAGAGGAGAGAGAGAAGACGGAGAGCGATTGCTGCCAAGATCTACGCCGGCCTTCGAGCTCAGGGTAACTACAAGCTTCCCAAACACTGCGACAACAACGAGGTCCTCAAGGCTCTCTGCTCAGAAGCTGGTTGGATCGTGGAAGAAGACGGCACTACCTACAGAAAGGGATGCAGGAGACCCACGGGAAGTGAGATTGGAGGCACTCCACCCAACATAAGCGCGTGTTCTTCGATTCAGCCAAGTCCACAATCTTCGTCATTCCCGAGTCCAGTGCCTTCCTACCACGCTAGTCCAACCTCTTCCTCCTTCCCCAGCCCCACTCGCATTGACGCAAACCCCTCTTCCTTTCTCATCCCATTCATCCGCAACATAACTTCAATCCCCGCCAACCTTCCCCCTCTCAGGATATCCAACAGCGCCCCTGTCACCCCACCTCTTTCCTCTCCCCGAACCTCCAAGCGCAAGGCTGACTTCGATTCCCTCTCCAACGCCTCCTTCCGCCACCCTCTTTTCGCCACCTCCGCCCCCTCCAGCCCCTCGCGCCGCCACCACGTCGCGACTTCCACCATCCCCGAGTGCGACGAGTCCGACGCTTCCACCGTCGACTCTGCCTCCGGCCGTTGGGTTAGTTTTCAGGGCCAGACCGCCGCCGGTCCCCCTTCCCCTACCTTCAACCTCATGAAACCCGCTATACACCAGATCCCTGCTCAGGAGGGCGTACAGTGGGGTTCCGTTGCGGAGATAGGCAGAGGAGTGTCCGATTTTGACTTCGAGCATGGAAGAGTGAAGCCTTGGGAGGGTGAGAGAATACACGAGGTGGGAATGGATGATTTGGAGCTTACTCTCGGATTTGGAAAAGCTTGA


Promoter Sequence:
>Vu_34875::LG10:15397625-15399625(+)
GTACAACACTACTACCAGTAATTGTACCACCACCAAATTTTTGGGTGGTTTTCTTACCAAATCAACGTGACAAAAGCAGAAGAAACAATGTTTACATGATACCCAGAGTCGCAAATCACATATAAGAAATCTCTGTCAGTTTTGTTTGTAAATTTCGATTCCTTCCATCAGTATATATATTTTTTTAACTGACACTGCTGTCCGGAACATATTCGTTGAATATTTTTATATTTTAATGTGGCGTGGTGTGTGGCGGACCTAGGGTATAGGGCACCTCACCATTAGGTGTAGGGAGGGCCCCCCTGTATTTGGTATGACTCATGTGGGGAAGTCCTCGCCGCAGAAGTGGACTGTGGTATCCGTGATTGAGCTACAGGTCTACACTGTAAGGATGTAAGGATGCTAATTTCTAACCAACATCTCATGTGCCTTCCATGAAGGGAAGGTGTGTTAGGTCACCCATGCTATATTTCCTATTTCAACAAACTTCATTTTCCACGCCACGCCACTTAAAATCAAATTCCACCACCATTATATTACATTAATTTCATTTTACTTCAAAACATCACAACCATCCTACCTTTTTAATTCATTTTCCTAAATTTCCTTGCATTTACTATTTCACTACTTCCTCGTCACACTGTTACTTTTTTTATGCTGCCCAGTCCTATGGGCTCCACGCGTTCCAACTAATTGTTTGAGCATCCTTTTATATCTTTTAGGCCCTGTTCTTTTGAGTGGATTTGAGAGGATGGATTTGAGGGGATTTGAGAGAATTTGAAGATAATTTTTTTTGTCGTTTATTTGAGTGAATTTGGAAGTAAATGAGAGTGAATTTGGAAATAAAATTTGTGAGAATTAGTATAGATTTGTATTGACATGACAAATTAAAAAAAATGATTTCCAAATTCACTCTCATTTACCTTCAAATTCACTCAAATAAATGACAAAAAAAATTATCTTCAAATCCTCTCAAATCCCCTCAAATCCATCCTCTCAAATCCACTCAAAAGAACAGAGCCTTAGTGTATTCCAGCCTGAACACCTTGTTTGTTTTCGGACAAATTTAAAAGAAGTAATAAAAAAAACTAGAGACAAACTTTTTAAGAAAATGTAAAGAACACAGATGTTAATAATTTATTGTAAAGATTTGCAAATTTATTTCAACCTATCACCGAAGAAAAAAAGACACGACATAATTAGTAGAGATTGAATTCTTTCATCGCGTTGATTAGTATTAACTTTTAATCACGTGCATTGAAAAACACAATCCTATGCGAAAGAAAAAAAGCTCATTTACGTGATATTTATAACAAAATCATTTTCGGATTTGTACGTTTGGTGTATTACTTGTGATTCTTTTGAAACATTTCTCATTAGTTTTGAGTAAGAAATTATTTTAAACATAAAGAACAAATCCAAATTCACAGTTAAATGGAAAAGCTAAATAAAATTATATTTCTTCAAATTATGGATACTTTTTATCACGTAGGTTTGTAATATTAATAATTGGCAAATAGGAAAAAGAAATGAAAATATGTATGCACACAAAAGGATTCTAAATTATCCCAATCAACTTTTTTTAACAATCTTCTCAATCATTAAACAAACATATTAAAAATTCGAATGAATTTAATGTGTATATTTCTGTTCAATTTCTATTAATTAAATACTAAAACCAGGATATGTTTTTCCTGCAGTTAATTAGGATTTGATTAGTAAATTAAACTATATAAAAAACGTATTGTTGCTTAGTAGAGTATTAGTTAGAGAACTTAACGGCTTATCCTTAACGGTATAATATGTAGTTTGGATCAAATAAAAATGCAGAGTGTCTTTTGTAAATATATATTGAGAATGTATTAAGAGCCATTTTTATCATTACCAGTATGGTAATATTATTCATCTTGATCCCCTTGCGTGGGGTCCGTGTCTCTTCCGTTCTCCTACGTTGTATGGATGGGAAGAATATATATGTGGTAGTGAAAAGGAAAAGGAAA


Gene Sequence:
>Vu_34875(+)
AAAGAAAATAGAGTTAATGAAGTGAAAACTACGGCAGTGTGAAAAGGGTGGGAGAGAGAAGAGAAGAATCTAAAAGGGAAGCAACCTTTCCATTTCCTCTTCTTCATCTGCAATACCACAAAGAAACTTGAATCAACCTCGCCTAGGTTTTGTTCCGGTCACATAGGCACAAGCATACACACAATTTCTGTACTTCTTCTGACGTTCAGAGGGAAGCGGAGCGGGCTAGTGTTGGCCGGAACGATGACCGGAGGCGGATCGACGGGAAGGATGCCCACGTGGAAGGAGAGGGAGAACAACAAGAGGAGAGAGAGAAGACGGAGAGCGATTGCTGCCAAGATCTACGCCGGCCTTCGAGCTCAGGGTAACTACAAGCTTCCCAAACACTGCGACAACAACGAGGTCCTCAAGGCTCTCTGCTCAGAAGCTGGTTGGATCGTGGAAGAAGACGGCACTACCTACAGAAAGGTAAAACTCGATAATCACTCGTCTCATCACATCACAGGCTCAGATCTGCGATCACTCTTTCTCCACGATAATGGATAATTAATTATTACCATTTATGTTGACACAGGGATGCAGGAGACCCACGGGAAGTGAGATTGGAGGCACTCCACCCAACATAAGCGCGTGTTCTTCGATTCAGCCAAGTCCACAATCTTCGTCATTCCCGAGTCCAGTGCCTTCCTACCACGCTAGTCCAACCTCTTCCTCCTTCCCCAGCCCCACTCGCATTGACGCAAACCCCTCTTCCTTTCTCATCCCATTCATCCGCAACATAACTTCAATCCCCGCCAACCTTCCCCCTCTCAGGATATCCAACAGCGCCCCTGTCACCCCACCTCTTTCCTCTCCCCGAACCTCCAAGCGCAAGGCTGACTTCGATTCCCTCTCCAACGCCTCCTTCCGCCACCCTCTTTTCGCCACCTCCGCCCCCTCCAGCCCCTCGCGCCGCCACCACGTCGCGACTTCCACCATCCCCGAGTGCGACGAGTCCGACGCTTCCACCGTCGACTCTGCCTCCGGCCGTTGGGTTAGTTTTCAGGGCCAGACCGCCGCCGGTCCCCCTTCCCCTACCTTCAACCTCATGAAACCCGCTATACACCAGATCCCTGCTCAGGAGGGCGTACAGTGGGGTTCCGTTGCGGAGATAGGCAGAGGAGTGTCCGATTTTGACTTCGAGCATGGAAGAGTGAAGCCTTGGGAGGGTGAGAGAATACACGAGGTGGGAATGGATGATTTGGAGCTTACTCTCGGATTTGGAAAAGCTTGATTTGTTCTCGACAACCACCTTAAAGAATTACAGATGCAATTGCAATCCCCTCCATGTGCTATCTTCTGGGCAATTAATTGGTTGTTATGCTTATATTTATATATTTTCTCTCTAATTATGTGTACAGTGTCTCTTATATACCAGTTATTAGGTGTTCTATTACATCATGGAATTTGACTTCATTGTAATTCCTCGTTAATTGTTCAAAGGTTGCATTTGAAGCAATCTTCTCCAAGTGTTTACTTCAGACTTTAATCTTCACTTACTAAGACTCGGGAAAACTAGGTGATATTCTTAATTTCATCATCCTCTTATTCATTTTT