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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_34850 LG10 15099099 15105270 PREDICTED: BEL1-like homeodomain protein 4
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/C 15103180 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_34850.1
MSQDFQPGIFSFPNGLERGRVSPQQQIRRDKVRLQGGFEAAPLVGIEEEEPVYETAGMLSEMFNFPHAASAELMEQQPVTATFRAARQAGEWYGNRQQQGVNMMMGGLGDSKNQNGVNNNQHQPQHQISSINADSAAAMQLFLMNPQTRSPSPPQSHATPSSTLHMLLPNPSSNSLQGFTGSAVGGSFGQFTWVPESAHQQGGVMEGQGLSLSLSSSLEAAKAEELRMGDSGFLYYNHQQGGGVGAGASSSSSTVQFPYKNNSHHQALHLQGVIGHDNNQQGHVGFGSSSLGVVNVLRNTKYVKAAQELLEEFCSVGRGQFKKNKSNRQNSNPNSNPDGGGGGSSPSSKDAGIPPPPLSAGDRIEHQRRKVDRRYNHYCEQMQMVVNSFDLMMGFGAAVPYTALAQKAMSRHFRCLKDAITAQLKQSCELLGEKEGAGTSGLTKGETPRLKVLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEEMYQQELKETESTEERENNQSNNSNISGNQAQTPSTPGAATTSTATTAAPPTITTTKPTGKKSDINATESDSSLVAMNRQGFSENQGKQSTTTSTTVMASVSATTSEIAPPGSQCFDSDLPPQRLMATDDTCRLVTADFGTASAVLTLDPHSLDLGPQLVTCHSP*


CDS Sequence:
>Vu_34850.1
ATGTCCCAAGATTTTCAACCAGGAATCTTCAGCTTCCCGAATGGGTTGGAGAGAGGAAGGGTGAGTCCACAGCAGCAGATCCGGAGGGACAAAGTAAGGTTGCAAGGAGGGTTCGAGGCAGCGCCATTGGTAGGGATAGAAGAAGAGGAACCGGTGTACGAGACTGCCGGGATGTTGTCGGAGATGTTCAATTTTCCGCATGCGGCTTCGGCTGAATTGATGGAGCAGCAGCCTGTTACGGCCACGTTTAGGGCGGCGAGGCAAGCCGGAGAGTGGTACGGAAACAGACAGCAACAAGGGGTGAATATGATGATGGGTGGATTGGGGGATTCGAAGAACCAAAACGGTGTGAATAACAACCAGCATCAACCACAGCACCAGATTTCAAGCATTAATGCTGACTCAGCAGCTGCCATGCAGCTTTTTCTGATGAACCCTCAAACGAGGTCGCCTTCCCCTCCTCAAAGCCACGCCACTCCTTCTTCAACACTCCACATGTTGCTTCCCAATCCTTCTTCCAATTCCCTCCAAGGTTTCACCGGTTCGGCCGTGGGAGGGTCTTTTGGGCAATTTACATGGGTTCCTGAGAGTGCTCATCAGCAAGGAGGCGTGATGGAAGGGCAAGGTCTTTCGCTATCGTTGTCTTCTTCGCTGGAAGCAGCGAAAGCCGAGGAATTGAGGATGGGGGACAGTGGTTTTCTATATTACAATCATCAACAAGGGGGTGGTGTGGGAGCTGGCGCTTCTTCTTCTTCTTCAACAGTTCAATTTCCGTACAAGAACAACAGTCATCACCAAGCATTGCATTTGCAAGGGGTGATAGGACACGACAACAACCAGCAGGGACATGTTGGGTTCGGGTCATCCTCGTTAGGTGTAGTTAATGTTCTGAGAAACACAAAGTATGTGAAGGCTGCACAAGAGTTGCTCGAAGAGTTTTGCAGTGTTGGGAGGGGTCAGTTTAAGAAGAACAAGTCGAATAGGCAGAATTCAAACCCTAATTCAAATCCCGATGGTGGTGGCGGTGGTTCTTCGCCTTCGTCAAAAGATGCTGGTATTCCTCCTCCTCCTTTGTCAGCCGGTGATAGGATTGAGCATCAGAGAAGGAAGGTGGACAGGAGATACAACCATTACTGCGAGCAGATGCAAATGGTGGTGAACTCGTTTGACCTGATGATGGGTTTCGGTGCGGCGGTTCCATACACAGCACTGGCGCAGAAAGCAATGTCTCGGCATTTCCGGTGTCTGAAGGACGCAATAACAGCACAGCTGAAGCAAAGTTGCGAGCTACTAGGAGAGAAAGAAGGGGCGGGGACCTCAGGTTTGACCAAGGGTGAGACCCCAAGGCTTAAGGTTCTTGAGCAAAGCCTAAGACAGCAGAGAGCCTTCCACCAGATGGGGATGATGGAACAAGAAGCTTGGAGACCCCAGAGAGGCTTGCCTGAACGATCTGTCAACATTTTGAGAGCTTGGCTTTTCGAACATTTTCTCCATCCGTATCCAAGCGATGCAGATAAGCATCTGTTGGCACGACAGACTGGACTATCGCGAAATCAGGTATCAAACTGGTTCATTAATGCCAGGGTTCGGTTGTGGAAACCCATGGTGGAAGAGATGTACCAACAAGAACTTAAAGAAACAGAGAGTACAGAAGAGAGAGAAAATAACCAAAGCAACAACAGCAATATCAGTGGGAACCAAGCACAAACTCCAAGCACACCAGGAGCAGCTACGACGTCAACAGCAACAACAGCTGCACCACCAACAATCACAACAACAAAACCAACAGGGAAAAAATCCGATATCAATGCCACCGAAAGCGACTCATCACTTGTTGCAATGAATAGACAGGGCTTCTCGGAAAACCAAGGAAAGCAGTCCACCACCACCTCCACCACTGTCATGGCCTCCGTCAGCGCCACCACCTCTGAGATTGCACCACCCGGGTCACAGTGCTTCGACTCAGATCTGCCCCCACAGAGATTAATGGCCACTGATGACACGTGTCGCTTGGTCACAGCAGATTTTGGGACCGCGTCTGCAGTGCTGACATTGGATCCACACTCATTAGATTTGGGACCACAGTTGGTGACGTGTCACTCACCCTAG


Promoter Sequence:
>Vu_34850::LG10:15105270-15107270(-)
TTCAAGAAAATTGGAACTTAAATATTGTATAATTAAAAGACGAGTATTAGTTTAAATATTGTATATAAAAAAAAGCTTTTATACAAATACTTTATAATTAATATTTTTATACCGTCTATAAAAACCATAACCTAATAAAAAATTGGATAGGAAATTAACAATGTTCCGTTTGTATAAAAAGTTATTAATTGTAGACATATTTGTTTGAATGAAGTTTTCTATATTTGATAATAACTCTGGAAGACTTGGAGGACAGAATAATAATGATGTGATAAAATGATTACACTTAAAAAATAATATTTAAAAATATGAAAATATATTTAAACCTTAATCATAAGTAAAAGAAGGTGAAACATGAAAAACACCTGTAAAAAAATAAGGATACACGAAAAGGGAAAATGAACATGGTCACTGTGACAGTGGCAAACCTTAAAGCGGTTATGAGTACTTTTCAGACCCTATTTATCCCACACAAACCTAACTTGTCTGTTTTGCCCATCCACTCGCACGTGCCATCCATCCTCTTCGTCTAGCACTCCTGATTTCTAAAATCTCTTATATTTTTCCTGTCTCACTTCGCTAGGGCTATTTGTGAATTTGCAGCGCTTAGTATGACCAACATGACCTTACCAACTAAGGGGGCTCATCCCCATCGGCAATGATTATGTAGGGCACTACGGTCATTCCAACATATAAAAAAAAGATGGTGGTAGTTTGGATCGTTGAGATGACTTTCTACTCACCTTATCTTTATTTTATTCCGTAGTTTGCGTTTGTTTCCAAAGGACGTATTCAGATGACAATAAAAGCCAATACTTCTGATGACATTGCGTTAATTTCATTAACACCCTATATAAAACTAAGCTACCATCACAACAAATAATTAAAAAATTAATCATGATCCTCTCGTTAAACATATGATAATTTTTATTCAACATATACCATTAAAAGTTTCTAAGTTTCTGTACAAACATGTTAGAGTTTGCGTATTTTTCCTTTTCAGAAGCATCCATTCATATTTTGGAAGAGAACAAAACTGCTATATACAAATCGTTAGTCTCTTAAATAACAATCCTTAAATCCAAGGCTTATTGTTCCTATTTTTTGAGTATACAAGATAGGGTTATTATGGTCATTGGAGTGGATGAATATTTCTTGTGTGTGCAATTGATTACCAATTTATATAAATATGGAAAATGGTGTGAAATAGAAGAATAAGAAGATTAAAAAAAAGTATATATAAAAGGACATTATTGGTGGGGAAAAAAAACTAAAGGAAGAGGTGAAGACCAAAGAAGGGTGAGAGCGACAGCTTCCCTTTCCTCTCTCTTCTTCACTCTCTCGTTCTTTCTTTCTCTCTCTCTCTCTCTGTTTATCTGAGACAAGTATGATATCAGTCCCCCAAACCCTCCATCTTTAATTTTATATCGTTGTGAAGCCCGCACTTTCTTTTTAGAGAAGTGATTGCAGAGACCTCTTATTTCCCAGAGAAACAAAAGAGAGACCACAACATACAGAGAGAGAAATTGAGTGACTGTGTTTATATGTGAGAGAGAAAGAAGGAACTGTGGAAGCTATCAAAACCACCGAGGATGTCTGAGTGCTTTACATCTTTTCATATCCTGCAACTCTAAGAGGTACACATATGTCTGCATATGCATACGCCATTAGATATACCAGCAAAGCTGAAAATGATAGAGAGGAGAATTTAGCTCTCTCTTTCTCTTTTTCAATTGTCTGTGAATAGTATTTTTTGATGTGCTGGATTTCTTTAATTATTCTTCTTATTACTGATCAATAATTCAACCATTGGACAGAAGTAACCAGGATAAAGCTACTGAGGAGGGTTTAGTTATTTTTGTTGGTACTTGCTGGCCAGAGAAAAGAGATAAAGATGATGGTTTTAGCATGGGAATAAGAACGCCGTTACATTCATCGAGGAGACTAGTACTGCACACCATTGGTTTTCTTTTCGATCTTGGATTACTTGTTGCAATTCT


Gene Sequence:
>Vu_34850(-)
ATGTCCCAAGATTTTCAACCAGGAATCTTCAGCTTCCCGAATGGGTTGGAGAGAGGAAGGGTGAGTCCACAGCAGCAGATCCGGAGGGACAAAGTAAGGTTGCAAGGAGGGTTCGAGGCAGCGCCATTGGTAGGGATAGAAGAAGAGGAACCGGTGTACGAGACTGCCGGGATGTTGTCGGAGATGTTCAATTTTCCGCATGCGGCTTCGGCTGAATTGATGGAGCAGCAGCCTGTTACGGCCACGTTTAGGGCGGCGAGGCAAGCCGGAGAGTGGTACGGAAACAGACAGCAACAAGGGGTGAATATGATGATGGGTGGATTGGGGGATTCGAAGAACCAAAACGGTGTGAATAACAACCAGCATCAACCACAGCACCAGATTTCAAGCATTAATGCTGACTCAGCAGCTGCCATGCAGCTTTTTCTGATGAACCCTCAAACGAGGTCGCCTTCCCCTCCTCAAAGCCACGCCACTCCTTCTTCAACACTCCACATGTTGCTTCCCAATCCTTCTTCCAATTCCCTCCAAGGTTTCACCGGTTCGGCCGTGGGAGGGTCTTTTGGGCAATTTACATGGGTTCCTGAGAGTGCTCATCAGCAAGGAGGCGTGATGGAAGGGCAAGGTCTTTCGCTATCGTTGTCTTCTTCGCTGGAAGCAGCGAAAGCCGAGGAATTGAGGATGGGGGACAGTGGTTTTCTATATTACAATCATCAACAAGGGGGTGGTGTGGGAGCTGGCGCTTCTTCTTCTTCTTCAACAGTTCAATTTCCGTACAAGAACAACAGTCATCACCAAGCATTGCATTTGCAAGGGGTGATAGGACACGACAACAACCAGCAGGGACATGTTGGGTTCGGGTCATCCTCGTTAGGTGTAGTTAATGTTCTGAGAAACACAAAGTATGTGAAGGCTGCACAAGAGTTGCTCGAAGAGTTTTGCAGTGTTGGGAGGGGTCAGTTTAAGAAGAACAAGTCGAATAGGCAGAATTCAAACCCTAATTCAAATCCCGATGGTGGTGGCGGTGGTTCTTCGCCTTCGTCAAAAGATGCTGGTATTCCTCCTCCTCCTTTGTCAGCCGGTGATAGGATTGAGCATCAGAGAAGGAAGGTCAAACTTCTATCAATGCTGGACGAGGCATGTATTGTAATCTCTCTCTTTCTTTCTGTTCTCCTCTCGCCTTCTCTCCCCATCAAGAGTCAAGGTCCCCCAATATCTTTTCCTTCTAAATTATTTCCTTAATTTAATCCTTTAATTAATACTGCATTATTTGTCTTCCAAATTAACAAGAGGATTATAAAGGACACGCTTCTCTTCTCCGGCCGGTATCTTTAATTAATTTCCACCTTTTTAAAAAAGTAGAAAAAAGGGAAAAGGCCGGCTGGTATAATAGGGTTCCATTTCATAGGATCAGTTGGTAGGTAAGTGTTCCTTATTTTAATTAATACAAAACTGTTTTTTTTAATCCTTGGATTTGATTGGTGGGATGACTTTATGTTATTTTATTTGGGTTTCTTGGTTTGGTGCAAACCATGAGACTAACTATTAGGAGAATACGTCCATCAAGAAGCGACGTCCCTTCTCATTAGTAAGATAGACTCCAACACAAGGAAGAAAGCACTCACTCACGTACCAATCCACCAGACCTATCATGGAAATATTGCAATCAAACCCCTTTTTATCATATCTAAGTTCATCTGAACACATTCACAGGGGCTTTTCTTTTTCTTTTCTTATAAATCAAAATTCATCCTTTACTATTTTTTTATTTTTTTTATTTATGTGCCAAGACTATCAGTGGAGAAGGTTACTTCCAGAAAGAAACCAAAGAGATTGATTATTCTTCCTACACGTTAACAATTAATGAATACTTCAATGCATCCCTATTATTCCTTGGCTGGGATTTGGTGTTTTATTTTCCTCTTTCTCCCACACAATCAACCAAATTAAATACTTAGTTGGAAAATGTCTTTCTCCTGTCTAATCCATTCATTTAACAATCATAAACTTATCAATATATTTAATTTGCCCAGTGGTCTTTCACTGTTTGCATGGGTTAGTGCCTTTTTTTCTAACTAATAACTATCCACATTTATTTCACATGAGTTGCTTTCCCTTATTAATGCTAAAGTTGGTTCATCTAGCTTTTCACAAACCGCACAATGAATGAGTAAATGAGAGCATGCATGAACACATCTTCTTGCCTTTACTTTCTTATTTTTTAGTTTTTTTGTTATTTTTATCTTCAACATTATTTGATCTGTTCTCTCATTGATTAATATGCAACGTTGTGAATATTTAGACGTGGTAAATTTTTGTTTTTTCAGGTGGACAGGAGATACAACCATTACTGCGAGCAGATGCAAATGGTGGTGAACTCGTTTGACCTGATGATGGGTTTCGGTGCGGCGGTTCCATACACAGCACTGGCGCAGAAAGCAATGTCTCGGCATTTCCGGTGTCTGAAGGACGCAATAACAGCACAGCTGAAGCAAAGTTGCGAGCTACTAGGAGAGAAAGAAGGGGCGGGGACCTCAGGTTTGACCAAGGGTGAGACCCCAAGGCTTAAGGTTCTTGAGCAAAGCCTAAGACAGCAGAGAGCCTTCCACCAGATGGGGATGATGGAACAAGAAGCTTGGAGACCCCAGAGAGGCTTGCCTGAACGATCTGTCAACATTTTGAGAGCTTGGCTTTTCGAACATTTTCTCCATCCGTAAGTTTTCCTCTCTTTTCTCTCTCCCTTCTCATTACTTATTATAACACGAGGATCATATTTGCCTATTACTTTTACTTACTTCTTCGCCCATGTGCTTGTACAATCTTCACCTACAGATTGTGTTGTACAAATAAGCAAATGAACAACTAAAATATATTTTTAGCAATTTATAAAATGAAAGCAACATTTGTTCCAGCACTGTGTTGAATATGGAATAGTACTATTTTCCAGTATGAGTAATGTGTATGTTATCTATAATAACGGTTCTTGACTTGAGAGTTAAAGATAAGACCCTATACAGAAAATAGTGTAATTATTAAGAAGAAGAGAAAGCAGGAGGGTTTGTGTTTATTTGAAAAGATAATAAAGAGACAAAGAAAGGGAGGGGATGTGGCAGAAGGAAAGAGAGAATCTAAAAGCCATTATTTATGTGCCCAACGATCGTTTAGATGAACAGTAATGCAGTAATATTGCAGCGTCCTTGGATGTTGTCTTGGCAGCAAAAAGGTCGAAAGATGCATACAGCACATCGCTGCTTTAACTACGATGAATTTATCAGTATCTTTTTTTTCTGATATTGTTGAATGCCTAATTAGATTAGAGATTAAGTGGAAGGGTGGGGGAGGGGATAAAGTAGAGACAGTGATCAGTGTGTCCAGTAATCTGCTTTACTTCTGGCATGGCAGCTAGGACATAGATCTTTCTTTCTTTCTCTTAGATTCTCACGCCCACGAAGGGAAAGAAAGAAAGGTTTCAAACTCAGCTAGGTGTACAGAAAGCTCCGTGTCCTTTTACACAGTTAAGGCAGGGACTCTGATGTCATTTTCTCGTCTCTTTCTCAGGTATCCAAGCGATGCAGATAAGCATCTGTTGGCACGACAGACTGGACTATCGCGAAATCAGGTTCCTTCATTTCTTTCTTAACTTTAATCTCTACACTGTTTAATATTTCATAAGATGCAAAGTGCCCACATTAACAAGACTAAGTAAAAAAGAAAAAAATAAAAAAAAAGAAGAGAGCAATGAATGGAAAAAAAAGAGGGACCAGCACTGAGTTCAGATGCAACTTACGTGTTTTTGAGTTTTGTTTCTCTGGTTTTTTTTTCTGTCTCTCTCTAAGCAATGCTGGTTTTATCTTGTTTAATGTCACCTTTTCTCTTTTTGTTCTCACGTCGAAAACTTCGTTTTCTTCTCTGAAGACATACTTATCTTTTTGTCTAGTTTTAATTTAGTATTCGAATCTTTTACACACTAGACATAATTAATTCTGAAATGAAATGAACAGAAGTAAGTACAGAAGCAATGAGAGTTATAAATAAATTTGTTGTCTTCAATTCATCTCACTCTCTTCCAATTACTCTTTTCTCTCTCATGTGAAACTGCCTGCTCCTCCTCCCAACTACACGTTATAGCAACCATAAATATGAGGGAATAAATGTGTATATTTCAGATGTTAATGTCTCTCCTAATGCCATGTTTCGAGTTCATGCAGCTTCGTCCCCCAATACCTCTCTCTCTCTCTCTTTAAACATTATATTTTTTATATATAAAAGTACATGCACTGTTGTACATAAACACATTTATTTTCACTAGTATATAATTCTATTCTAAATTTTGTGTGTTTGGCATTATCATTTATGTCTCTTTTTTCTTAGCACGTAAATTTTGAACTCTCAACCGAATAGAACAGAAAATAAATTGTCCCTCTTCATATTTATTCTATCCCTGGATTGAAATAAAAAAATAAATTATTTTCAATATTTGGTTTTTTTATTCCTACTTTATCCTAACTCATACAATTTTATAATTATCTTTAGTGTTATTAATCAATTAAAATTGAAGTTTTGAAGTTTTGTCTCAATAATCTATAATGAAAACTTGTTCTATCTATAGTATGGAACTCTAGATTTTGATGGGACGATGATATCAAAGCACTTAAAGGAACTATGTTTTGTCATTGAATATTACTGTTTTTCATGATTTTTTTTATCAACTTTGTTTATGTCATATACAAAATATAATGTGTGAAAACTTATAATTAACCTTTGTTCGGTTTACGAAAAGTGAGTGGTTGAGAGAAACTTGATAGAGGAAATGATATTTTTAGTGATAGAACAAATTGATTCATTTATTTAATTATCATTTTATTACAAGAATATCAGGTGTTTTAAACATATTTACTTTTATTTTTGTTTAGCTTGAAGTTTTTATTAGTGAAGCAAGAATATTAAATGATTTTTCTGCTATATTTTGTTTTTATTTCATCTTCTCCTAAATTAGATCTGTAGCAAACCAAGATGCTGAGAGCTGGAGAGAAAAAGAAGAAGAAAAAACTGTTAATTACCTGTGCCTATCTTCCAACTACACCCCATATGCACCTATACCCCATAGTGGTCAGTGAAATGGGGAGAATTAGACTCATACAACTAAAAACACTGTCCCTTCTTAGAAGAAACTGGTGATGAATAGTTTCATCTGTTGTGTAACTAATCACATATATATTTTAAATCTGTCATCTTTGATGTCCTTTGTGTTACACCACAGAGAAGATACCTCGAAGTCTAATCACACTTTAGCAGAAAAAGACAAACAACAATGAGCCAGCAGAAAGGAAGCTCTTGTGTGTCCTTTTTCTTTTTGTACTCATAATAGTATCAATTAAATAATCGAACTGAAATTATATACTCGTAGGGTCAAAACACACGGTGAAGGTCAACAATAAGGATTTTATATCAAGGCATTCATGCAGTTTAGTTTTTGATGATATAAAGCACAGCTTTGATACTGGAGTTTTAGTTTGTTCGTCGTCCCTTTAGTCATATTGAGAATTTTCTGAATAGAGCTTGATGTGTTTATATATATATATATATACGTAGATTGATGGGTGGAACGTGATTTTTTCAGGTATCAAACTGGTTCATTAATGCCAGGGTTCGGTTGTGGAAACCCATGGTGGAAGAGATGTACCAACAAGAACTTAAAGAAACAGAGAGTACAGAAGAGAGAGAAAATAACCAAAGCAACAACAGCAATATCAGTGGGAACCAAGCACAAACTCCAAGCACACCAGGAGCAGCTACGACGTCAACAGCAACAACAGCTGCACCACCAACAATCACAACAACAAAACCAACAGGGAAAAAATCCGATATCAATGCCACCGAAAGCGACTCATCACTTGTTGCAATGAATAGACAGGGCTTCTCGGAAAACCAAGGAAAGCAGTCCACCACCACCTCCACCACTGTCATGGCCTCCGTCAGCGCCACCACCTCTGAGATTGCACCACCCGGGTCACAGTGCTTCGACTCAGATCTGCCCCCACAGAGATTAATGGCCACTGATGACACGTGTCGCTTGGTCACAGCAGATTTTGGGACCGCGTCTGCAGTGCTGACATTGGATCCACACTCATTAGATTTGGGACCACAGTTGGTGACGTGTCACTCACCCTAG

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