Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_34818 LG10 14835779 14837318 PREDICTED: dof zinc finger protein DOF2.2-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/G 14835781 splice_region_variant
A/T 14835821 3_prime_UTR_variant
A/T 14835884 3_prime_UTR_variant
G/T 14835961 3_prime_UTR_variant
T/A 14836028 3_prime_UTR_variant
A/T 14836045 3_prime_UTR_variant
G/C 14836358 synonymous_variant p.Ser251Ser
G/A 14836361 synonymous_variant p.Ser250Ser
T/C 14836376 synonymous_variant p.Ser245Ser
A/T 14836382 synonymous_variant p.Leu243Leu
A/G 14836838 synonymous_variant p.Thr91Thr
G/A 14836844 synonymous_variant p.Asn89Asn
G/A 14836895 synonymous_variant p.Cys72Cys
G/T 14837159 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_34818.1
MIQELLGAATASLIAGETKISINNNGGGGGGRLLLTPPAPSSPSPSPSCTTTITTSTNTATSSNSDNQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKSKTSGMSNSVGKQAATTKMKAVASELGRPQGLFDQELPQTPILWGSPQNTQLMALLRTTQSQSQNQNQNSNPNPNPSLVSIAVKREGNLSESHSHMVTESFLPNGLLNSTRTGLGYDGVGELPSLGLCSSFWRNNQNQNQQQSNGFVLGEQQSVGVQELYHKFRSSSSVHYCGSDNSPVFLGNMPSSSSLSNILESSSVSGSEFGCWNPTLSWGDLPTTSGAYP*


CDS Sequence:
>Vu_34818.1
ATGATCCAAGAACTCTTGGGTGCTGCTACTGCTAGCCTTATAGCAGGAGAAACAAAAATCTCCATTAATAATAATGGAGGAGGAGGAGGAGGACGACTTCTACTAACACCACCCGCACCGTCTTCTCCTTCTCCGTCTCCTTCTTGCACAACAACCATCACCACTTCCACTAACACCGCCACTTCTTCCAACTCAGACAACCAAAATTTGAGGTGCCCTCGTTGTGATTCATCAAACACTAAGTTTTGTTACTACAACAACTACAACCTCACTCAGCCTCGCCACTTCTGCAAGACATGTCGCCGCTACTGGACCAAAGGTGGCGCTCTCAGGAATGTTCCCATCGGAGGTGGCTGCCGGAAAAGCAAGACCTCCGGCATGTCCAACTCGGTGGGAAAGCAGGCCGCCACAACAAAGATGAAAGCAGTGGCATCGGAGCTTGGAAGGCCACAGGGACTCTTTGACCAAGAGCTTCCACAAACCCCAATCCTTTGGGGCTCACCGCAAAATACTCAACTCATGGCTTTACTAAGAACTACCCAAAGCCAAAGCCAAAACCAAAACCAAAACTCAAACCCTAACCCTAACCCTAGTCTCGTGTCAATTGCCGTCAAGAGAGAAGGGAACTTATCGGAATCTCACTCGCACATGGTCACTGAGTCATTTCTCCCAAATGGGTTGCTGAATAGTACTAGAACTGGTCTAGGATACGATGGTGTGGGAGAACTTCCTTCACTGGGTCTATGCAGCTCCTTTTGGAGGAATAATCAAAATCAGAATCAGCAGCAAAGCAACGGTTTTGTACTTGGAGAACAGCAAAGTGTTGGAGTTCAAGAACTTTACCACAAGTTCAGGTCATCATCGTCAGTTCATTATTGTGGTAGTGATAATTCACCGGTGTTTCTCGGCAACATGCCTTCATCATCTTCTTTGTCCAACATTTTGGAATCATCTTCAGTTTCTGGCAGCGAATTCGGGTGCTGGAATCCAACCCTTTCCTGGGGTGATCTTCCCACAACAAGTGGAGCATATCCTTAA


Promoter Sequence:
>Vu_34818::LG10:14837318-14839318(-)
TTTTGCTAATTTTTTATTCGACATAATTAGAAACCGAAAATTATTGGGAGATAAAATTGATATTTCGGTTTTATTCAATCACAAGTGTGGTAGTTTTGGTATATGAATTGATAAAATTAATTAATAACTAGACATATAAAGTATTATAAAGACGTGTCTGCGTGTTACATAATTAAAAAATAATAATAAATTTATACATTATTATTTTTAGTTAAAGAGCATTTAATCCAAAAAGAAAATCATCATACGAAATTTTGTAAGAAAGAAAACCATACAATTAAGTCTTAGCTTATAAGTCATATATATGCTACTTCCATTGACATATCATATTGAAGATTTTAAATCTGTATTTCTAATCAAATACCTTTAATATTTTTTTAATCAAATCTAGTTAACATTATATTGTGAGACTCATTATTCGTCCCTTCTATTTGATGAAAGAAAAGAACACGTGTTTCCATCTCGATTTACATGCAGCGTACCACACCATGACCCATGATCGCATATCAATTTTTTCTTTTTCGTATAATTGCAACAAAATTGATAACACATTTTATTATTGAAATTAGAAATAGTGTCTATTTACAGGACAAATATATTTGAGAACAATACGACCTTATAAATTGATATTTGTGATAATGAATTAAAATTAAAATTATTTTTAATATAATATCAATTTTTTTCCTAATAAAGTTTATTAAGCCTATCTTAATGTTATTTAACCATCCATAAATATATTGCAATAAAGTATTTTTTTGTTTTCTATTTTGATAAAGAGAAGGCTAAATTGATTTGGGATGTGCAGTGACAATATATTTTTAAGTTGGGAGCAGTAGGGACAATCAGCTTTACACGTATTTCCATGTGATTGCCCCTATTCTAGTCTCCTTTGAACTTGCAATGATGTTTTTTAGAACATGAAGCATCTTTATTTACGGAATTCGTTATCCCTCACATTAGGATTATTATTTAAGAAAACATTCATTACTTCTGCTTTAATTGCTGCTTTATATTACGTTTCGCCGTTGATCATACATGATTGATTAAACATATAAACATTCTGACAGACCAGACGCTAAAAGAACTTATACATGTAACGAGGACAAGAAATTTACAGTATTATGTAGAGCATATATAAATTAAGACCAAATTAACACAAAGATGAGTAAAAATCCGTAAGAGAAAGAAAGACGAATTACAATCTGTTAAATGTTGTATTGTGGTCATGCATATAGAAAGGGAAAATAATAACATATTATGATCCTTAGAAAATAATAATAACAAGCCTTTATCGGCATTCATTAGTCCTTAGTGGGACAGGCAAAATGATATCTTCTTCTTACATAATTGGTTGTGCAAGACCACACGTATGACATAATAAGTGTAATGATCAAGGCTTTTAATATATGTTTTCTGAATCTGATTCAAATCCTAAGATAAGAGTAATCATGAAGTTTAAGAAACAAGAAAAGAAATTATTGTACTTTAAAATTTTATATAGATTTTAGATACTGTGATTCCAAATTTCTCTCTCTGTCGCTTTCTTAGTAAATACTTAAATTCGTTTGAGTATTAGTCCGAAACATGTCATAAGAGGTACTAATAAATTTTATGTCTCTCTTTAGTATTAAAAAGATTACCATTTCACAGGTTAGTAGAAGAATAAATGTAATGGATAATAGAAAAAAAAAAGTTAACAATCATAGTTAATTTGAATGAAAGTATAGACTTGCAACATAACAATATTCCGTGTAATAATATAGGTTGTCTCGAAATACAAATTCCAACATGAAAAGAGATTGTCGTTTGTGAGATGAATGGGGTAAAAATGGGAGGTGATGAGTGATGGTTGTCTTTGTCCACATGGAGTCTATAAAAGAATTTATAAATAATATGATGGAAGTCCCATTCTAAACATTGGTTGGCAAGAAGCAAGAAGGACCTAACCGACAAGGAAGCAGTCCTAGCTATCAGCATAAAACAACCAAGCAACCCAATTG


Gene Sequence:
>Vu_34818(-)
AGTTCAATTCGCAAAGCTCATTCAATTTCATCGTATGCTTCATCCTACAATATTCTCTCTCCCCCCATTTCCCGCATACACAAATATATACCAAACCTACTTTCTTTTGCTTTTCTCCACCACTAACGCAAAAAGACTCACCACTCATCACCACACCACCCTTTTGCTTTTGCGTGTTTTTGGATTGTTCTAGATCTAAAAGATAAAGATGATCCAAGAACTCTTGGGTGCTGCTACTGCTAGCCTTATAGCAGGAGAAACAAAAATCTCCATTAATAATAATGGAGGAGGAGGAGGAGGACGACTTCTACTAACACCACCCGCACCGTCTTCTCCTTCTCCGTCTCCTTCTTGCACAACAACCATCACCACTTCCACTAACACCGCCACTTCTTCCAACTCAGACAACCAAAATTTGAGGTGCCCTCGTTGTGATTCATCAAACACTAAGTTTTGTTACTACAACAACTACAACCTCACTCAGCCTCGCCACTTCTGCAAGACATGTCGCCGCTACTGGACCAAAGGTGGCGCTCTCAGGAATGTTCCCATCGGAGGTGGCTGCCGGAAAAGCAAGACCTCCGGCATGTCCAACTCGGTGGGAAAGCAGGCCGCCACAACAAAGATGAAAGCAGTGGCATCGGAGCTTGGAAGGCCACAGGGACTCTTTGACCAAGAGCTTCCACAAACCCCAATCCTTTGGGGCTCACCGCAAAATACTCAACTCATGGCTTTACTAAGAACTACCCAAAGCCAAAGCCAAAACCAAAACCAAAACTCAAACCCTAACCCTAACCCTAGTCTCGTGTCAATTGCCGTCAAGAGAGAAGGGAACTTATCGGAATCTCACTCGCACATGGTCACTGAGTCATTTCTCCCAAATGGGTTGCTGAATAGTACTAGAACTGGTCTAGGATACGATGGTGTGGGAGAACTTCCTTCACTGGGTCTATGCAGCTCCTTTTGGAGGAATAATCAAAATCAGAATCAGCAGCAAAGCAACGGTTTTGTACTTGGAGAACAGCAAAGTGTTGGAGTTCAAGAACTTTACCACAAGTTCAGGTCATCATCGTCAGTTCATTATTGTGGTAGTGATAATTCACCGGTGTTTCTCGGCAACATGCCTTCATCATCTTCTTTGTCCAACATTTTGGAATCATCTTCAGTTTCTGGCAGCGAATTCGGGTGCTGGAATCCAACCCTTTCCTGGGGTGATCTTCCCACAACAAGTGGAGCATATCCTTAATCAACCGCAGTAACTATATTTCCTCTTTTTTATTTACCGTTTTCATTCAGCGTTAAATATAGAACTCCTTAATTTATAGTTTATAGATTTTAATCTGTATTCTAGAGTCTTCTCTTTTTTTCTTGTTCGGTCGTTTTGGGGTGGATAATTAAAGAATATGTACGTGTAGGTAGCATTAGAATTTTGTTTCCCACTCTCGTTTCTTTCTATCATTTGCTTCCGTCTGCATGTGTTTCTGGTTGATGGTGTCTTAGCTCTCTTAAATTCAAGGAATGGAAAATACAGTGTTTCTGC