Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_34808 LG10 14742469 14743365 PREDICTED: LOB domain-containing protein 36-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/T 14742518 missense_variant p.Arg17Leu
A/G 14742619 missense_variant p.Lys51Glu
A/T 14742629 missense_variant p.Asn54Ile
C/T 14742654 synonymous_variant p.Asp62Asp
T/C 14743056 synonymous_variant p.Phe196Phe
T/A 14743166 stop_gained p.Leu233*
A/G 14743170 synonymous_variant p.Gly234Gly
C/A 14743299 synonymous_variant p.Ser277Ser

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_34808.1
MSSSSNSPCAACKFLRRKCTQECVFAPYFPPDNPQRFAYVHKVFGASNVAKLLNELSASQRDDAVKSLAYEAEARLRDPVYGCVGLISVLQHRLRQIQVELNNAKKELATYIGPQAFQGLPAPILQQHPNNPFSGSLYGSMAGVTAATHGGQLMIRDGQSPQQHQILEAQQLAAAVAAREQQEMFRGYEHQQQQEFLRFSGGFDVGSASSAGGFSQISPAAASADQLSPSLALGSFDNPYHMQQPQQGEPHPHNIPFEAQLLLPPQQKQSPQQSQQSQLPLHQPQSESEECRSLGPSC*


CDS Sequence:
>Vu_34808.1
ATGTCATCATCATCGAATTCGCCGTGCGCGGCGTGCAAGTTTCTCAGACGAAAATGCACGCAGGAGTGCGTGTTCGCACCGTACTTTCCGCCGGACAACCCTCAGAGGTTCGCTTACGTGCACAAGGTTTTCGGGGCCAGCAACGTGGCCAAGCTTCTCAATGAACTCAGCGCCTCGCAGCGAGACGACGCCGTAAAGTCCCTCGCTTACGAGGCCGAGGCTCGTCTCAGGGACCCCGTCTACGGCTGCGTGGGCCTCATCTCCGTCCTACAACACAGGCTCAGGCAGATCCAGGTGGAACTCAACAATGCAAAGAAGGAACTCGCAACATACATCGGTCCCCAAGCTTTTCAAGGCTTACCAGCCCCCATTCTCCAGCAGCACCCAAACAATCCTTTTTCCGGTTCCCTGTATGGGAGTATGGCGGGGGTGACGGCAGCCACTCACGGTGGGCAGCTGATGATTCGCGACGGCCAGTCGCCGCAGCAGCATCAGATCTTGGAGGCCCAGCAGTTGGCTGCGGCTGTGGCGGCGAGGGAGCAGCAGGAGATGTTCAGGGGTTACGAGCATCAACAGCAGCAGGAGTTTCTTAGGTTCAGTGGTGGGTTCGATGTGGGTTCTGCTTCTTCTGCTGGTGGGTTCAGCCAGATATCCCCAGCTGCTGCTTCCGCTGATCAGTTGTCTCCTTCGTTGGCTTTGGGATCCTTCGATAACCCTTATCACATGCAGCAGCCACAGCAAGGAGAGCCTCATCCTCACAACATTCCTTTCGAGGCTCAGCTTCTGCTCCCTCCCCAGCAGAAGCAATCGCCGCAACAAAGCCAGCAGTCCCAACTGCCCCTTCACCAGCCACAGTCTGAAAGCGAGGAGTGTAGGAGTCTTGGTCCATCCTGTTGA


Promoter Sequence:
>Vu_34808::LG10:14740469-14742469(+)
TGCACTGCATAAAGAAAATACAATCATCATTGCGTTTCGCAGCAAAAGCCTGATCTCAACATTTAACTATCCCCTCCTCTTTCCTTTTACTATACTTTTTCTTTCTAACTTAATAAATCACCATTTTTTCTACCTTTTACTACCTAATCATCCTCTCCTATTTCCCAAAAATAAAAAACAATATCGTTTAATTATAAAAATTCTTTTTTTCTTTAACAGATGACCAAGTATTATTTAAATGCACACGTAACACGTTCGGTTATAAAGTCTTTTAAAACTATAACAATGTTATAATTAGTATTTGAAAAAGAAGGTTCCATAAACCAGTATCGATCAATTAGTCAATTCCACGTACTAAACTAATGTAGAAAAAACCGCGGACGGAGATGGAGTGGGGAAAATCTGTTGTACAAAGAGTCTATCTAATCTAATATGCACCACCGTAACAAAACAGCTCTACTTAGTTATATATAATTAATTTAAAATTCAGATGTATTGACTTTGGCAAATTTTTGGAATTACAAATTTAATGCATATACTAGTACTCCACTCTCATTTAAGATTCATGACACACATGCATGACGATTAATTGTCGCACAAATTGAAGATGGAAACGGGTATGGGTAAAGTAAGGTTATATGAAAGTTTTAAATACCATCAGCGTCACAAAAAGTTACAAATGATTTGGTGGTAGAAAAACTATGTATTATGACATGAATAATGTAGAATTTGATGACAAAATTTAGACAAGGCTGGAAAAGTGGAGCGAATATTCTTTTTGTTGATTGTGAGTGAGTGATGAGAGCAGGAAATATTAAATGTGGAACTGTAAAATTGTTTAGAAAATTATAAATAATAAATATTGCTAAAAAAGAGAAGGCAGTTAAGAAAATAATGATAGTGACTGTAAATAACAATGATAGTGGAAGACATAATATGATATATAGGGTGGGACGAAATGGGATTTATTAAGATAGATTTATGAAGAAGGGAAGGTTAGCTGGTCTTGAAAGCTCTTGCGCTTGTGGCAGCAGTGCTCAAGAAACTACAAAAAAAAAAGAAAAAAAAAAAAAAAACCTTCGACTCTATATATCGTTCCCATCTCTTCTATTTCCTTCGCTTCTCTCTCTCTCTCTCTCTTTCTTCTCAACCTCACCAACACAGCACAGCCTCGTGTGAAATTATTTCTTGCCTTGCGCCGATCTATTCACAGGTCACAGTAAGTTCTCTCTCTCTCTCTCTTCTCATGTATGTACAGCTTTGTGTTTTTAGAATCACACCGGTCACTGATGGATCTCATCACCTCTTTCGTTTCTCTCTTACCTCCAATCTTTGCCGCCACGCAAACAAACGTTGTGTTCAGATCTACCGGTGCAACTTAAGGTTTTTTTTTCTCACTTTCGTATTTCAAGATTTTCGACGTACTTCTTCTTCCTCGGACAATGTTATTCATTATGGCTTACCATTTTTTTTTCTCCTTTTCGGATTGAATCGTTTATTGACTGGTATTCTTGTCGGTTAAATTTTTGTGAGAAAAAAAAGGAACGATTTGGAGACGCTTTTAATGACCTAGATTAGTTTATTAATATCACGTTTGAAATCTTTTAATAAATCCGCGATCACGAATCGGAACATGAAGCTTCGTTGAATAATAATAATCCGTTTTTGTTTTTCTCTATGATTCCTCAATTTCCATGTCCTGCATTTATTTATTTACAGCTATCAAGGTTTAATTATTATTATTGATATCTCCATTTGACTCTCTCTCTTTGTTGTTTGTTTGTAGAAAATTAAAAATCAGGTACTGCAGGCTGTGAAAGCTAGATACTAATTAGATCGCTCATTCGAAGAAAGAGAAACCATAGTACTAGTACTAATTTTATTAGGGGGATTTGATCTAATATAATATGATTTGACGATTTAATTAACCGCAGAAGTTGCCTTGGTGTGTGAGGGACAAGAGAGAGAGAGAGGAAAGGAGAGAGAGGGATCGGAAAAGA


Gene Sequence:
>Vu_34808(+)
ATGTCATCATCATCGAATTCGCCGTGCGCGGCGTGCAAGTTTCTCAGACGAAAATGCACGCAGGAGTGCGTGTTCGCACCGTACTTTCCGCCGGACAACCCTCAGAGGTTCGCTTACGTGCACAAGGTTTTCGGGGCCAGCAACGTGGCCAAGCTTCTCAATGAACTCAGCGCCTCGCAGCGAGACGACGCCGTAAAGTCCCTCGCTTACGAGGCCGAGGCTCGTCTCAGGGACCCCGTCTACGGCTGCGTGGGCCTCATCTCCGTCCTACAACACAGGCTCAGGCAGATCCAGGTGGAACTCAACAATGCAAAGAAGGAACTCGCAACATACATCGGTCCCCAAGCTTTTCAAGGCTTACCAGCCCCCATTCTCCAGCAGCACCCAAACAATCCTTTTTCCGGTTCCCTGTATGGGAGTATGGCGGGGGTGACGGCAGCCACTCACGGTGGGCAGCTGATGATTCGCGACGGCCAGTCGCCGCAGCAGCATCAGATCTTGGAGGCCCAGCAGTTGGCTGCGGCTGTGGCGGCGAGGGAGCAGCAGGAGATGTTCAGGGGTTACGAGCATCAACAGCAGCAGGAGTTTCTTAGGTTCAGTGGTGGGTTCGATGTGGGTTCTGCTTCTTCTGCTGGTGGGTTCAGCCAGATATCCCCAGCTGCTGCTTCCGCTGATCAGTTGTCTCCTTCGTTGGCTTTGGGATCCTTCGATAACCCTTATCACATGCAGCAGCCACAGCAAGGAGAGCCTCATCCTCACAACATTCCTTTCGAGGCTCAGCTTCTGCTCCCTCCCCAGCAGAAGCAATCGCCGCAACAAAGCCAGCAGTCCCAACTGCCCCTTCACCAGCCACAGTCTGAAAGCGAGGAGTGTAGGAGTCTTGGTCCATCCTGTTGA