Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_34807 LG10 14726124 14730035 PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase PAK 4
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/T 14726532 intron_variant
G/T 14726725 intron_variant
A/C 14726959 intron_variant
A/G,* 14727021 intron_variant
T/A 14727036 intron_variant
G/T 14727411 intron_variant
C/T 14727497 intron_variant
C/T 14727534 intron_variant
A/G 14727699 intron_variant
T/G 14727740 intron_variant
C/G 14727741 intron_variant
C/T 14727746 intron_variant
T/G 14727749 intron_variant
T/C 14727785 intron_variant
G/C 14728585 missense_variant p.Leu343Val
C/T 14728586 synonymous_variant p.Leu342Leu
C/G 14729161 missense_variant p.Gly151Arg
T/C 14729228 intron_variant
A/G 14729231 intron_variant
G/C 14729512 intron_variant
A/G 14729519 intron_variant
A/G 14729551 intron_variant
A/T 14729552 intron_variant
A/T,G 14729553 intron_variant
A/G 14729557 intron_variant
A/T 14729564 intron_variant
A/G 14729582 intron_variant
T/G 14729670 missense_variant p.Glu122Asp
G/A 14729674 missense_variant p.Ala121Val
A/G 14729690 missense_variant p.Ser116Pro
A/G 14729712 synonymous_variant p.Ala108Ala
G/A 14729914 missense_variant p.Ser41Leu
A/G 14729940 synonymous_variant p.Ala32Ala

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_34807.1
MRWLPTLIFSHSHSSSSPSTSPSPSSSSSSSATRKSSSPTSSTVSHARKHTRSAWFFGGTRKSTRSRKLSHVEDIDAVVITPLSRSTSTFDRSSAPSSGPQPLPLPRAIDSRLPSSKDAAAEKPNAAVDKPNAAVDFTLPAGFQMRSVFAREENRKNMEHVETKSPRVAPQQDTSSGASTSAQGDNFWLSVPARSAPTSPFASPRIIPNIAKTDDFVPYYYVSPKANQFWSAPEMPTSDPSAGHPPPAFFDLSALRTDTTLSPPHQSPRGKSPTKHPKSPNAHSSSSSPSPSPSVHPILSLDTSMARRETTLPYSVHPLPLPPWAGPGAPIVSPPAIFSLPVAKTEPLPMKNQWQKGKLIGRGTFGSVYVATNRKTGALCAMKEAEAFSDDPKSAECIRQLEQEIKVLSQLKHPNIVQYFGSEIVEDKFYIYLEYVHPGSMNKYVREHCGAITEWVLRSFTRHILSGLAYLHSKKTIHRDIKGANLLVDSAGVVKLADFGMAKHLTGHVADLSLKGSPYWMAPELMQAVVEKDNSVEVAFAVDIWSLGCTIIEMFTGKPPWSEYEGAAAMFKVMRDTPPIPETLSAEDVSCSTHLYNGAPLMDIYSPRDLITFPFPVNILLRENSHCEVRIFHYDVLAIILCWKWRLNTLQWHLSALLALLLKCLQHFG*


CDS Sequence:
>Vu_34807.1
ATGCGTTGGTTACCCACCCTCATCTTCTCCCATTCCCATTCATCCTCTTCACCGTCAACCTCACCGTCACCGTCGTCGTCGTCGTCGTCTTCGGCTACTCGCAAATCCTCCTCTCCCACCTCATCTACCGTGTCCCACGCCAGGAAGCACACCCGCTCCGCCTGGTTCTTCGGCGGCACCAGAAAGTCGACGCGCTCCAGGAAGCTGAGCCACGTGGAGGACATAGACGCCGTCGTCATCACCCCCTTGTCGCGCTCCACCAGCACCTTCGATCGTTCCTCCGCCCCCTCCTCCGGACCTCAGCCGTTACCCTTGCCCAGAGCTATCGACTCCCGTTTGCCCTCCTCCAAAGATGCCGCCGCCGAAAAACCCAATGCCGCCGTCGACAAACCCAATGCCGCCGTCGATTTTACCCTCCCCGCTGGTTTTCAAATGCGCAGTGTATTCGCGAGGGAAGAGAATAGAAAAAATATGGAGCACGTGGAGACAAAGTCACCAAGGGTGGCGCCTCAGCAAGACACGAGCAGTGGTGCAAGTACAAGTGCTCAAGGAGATAACTTCTGGTTGAGTGTTCCTGCAAGAAGTGCTCCAACTAGTCCTTTTGCCAGTCCCAGAATCATCCCAAACATTGCCAAAACCGATGATTTTGTCCCGTACTATTATGTGTCACCCAAAGCCAACCAATTCTGGTCTGCACCAGAGATGCCAACATCCGACCCTTCAGCTGGGCACCCACCTCCTGCTTTCTTTGATTTATCAGCACTGCGCACTGATACCACCCTTTCTCCTCCCCATCAAAGCCCGCGGGGAAAAAGCCCCACCAAACACCCCAAAAGCCCCAATGCCCATTCTTCTTCTTCTTCTCCTTCTCCTTCTCCATCCGTACACCCCATTTTATCCCTTGACACCTCAATGGCACGTCGGGAAACCACTCTTCCTTACTCTGTCCATCCCTTACCCTTGCCTCCTTGGGCTGGGCCTGGAGCTCCCATAGTCTCACCTCCTGCTATCTTTTCCCTTCCTGTTGCTAAGACGGAACCCTTGCCAATGAAAAACCAGTGGCAAAAAGGAAAACTTATTGGCAGAGGTACCTTTGGATCTGTTTATGTTGCCACCAATAGAAAAACTGGAGCATTGTGTGCAATGAAGGAAGCAGAAGCCTTTTCCGATGATCCAAAATCTGCAGAGTGCATAAGACAGTTAGAGCAGGAAATTAAAGTTCTTAGCCAACTGAAGCATCCAAACATTGTGCAGTATTTTGGTAGCGAAATAGTAGAAGACAAGTTTTATATATATTTGGAATATGTACATCCTGGTTCAATGAATAAATACGTTCGTGAACATTGTGGTGCAATAACCGAATGGGTTCTTCGGAGTTTCACACGCCATATTCTTTCGGGGTTGGCTTACTTACATAGCAAAAAGACAATTCATAGAGACATCAAAGGGGCTAACTTGCTTGTTGATTCTGCTGGTGTCGTTAAGCTTGCTGACTTTGGGATGGCCAAACATCTAACTGGACACGTTGCAGATCTTTCTTTGAAGGGAAGTCCATACTGGATGGCTCCAGAGCTTATGCAAGCAGTTGTAGAAAAGGATAATAGCGTTGAAGTAGCTTTTGCTGTAGATATTTGGAGTTTGGGTTGTACAATTATTGAAATGTTTACGGGAAAGCCTCCTTGGAGCGAGTATGAAGGAGCCGCAGCTATGTTTAAGGTTATGAGGGATACACCTCCTATACCAGAAACATTGTCAGCTGAAGATGTTTCGTGTTCCACGCATCTGTATAATGGAGCACCCTTAATGGATATCTACAGTCCCAGAGATTTGATCACATTTCCATTTCCTGTGAACATATTGCTGAGGGAAAATAGCCACTGCGAGGTGAGAATTTTTCATTATGATGTCCTTGCCATTATCCTCTGCTGGAAATGGAGATTGAATACGTTGCAGTGGCATCTCAGCGCTCTACTCGCTCTACTGTTGAAGTGCCTGCAACACTTTGGATGA


Promoter Sequence:
>Vu_34807::LG10:14730035-14732035(-)
TTTTTCTTAAATCACTTTCGTTAGAGTAATAATCATAAGAGACAAAGATCATTGAACTTGTCAAGAATTTTTGGTTGGAGTGGTGGTGGGGTGGAGGGAGTGGGATGAGACCGGATGAGTCTTTGCAGGGGAAGCCATTCAGGAAATGATGTGTGGATGGACCACTATTATTGAATTTTACGAAACTTTAATGAGAAACACATGCTGCAGTTATTTTCGGGGTTTTCGATATTTTGTAAGACAATCATGGTCTCCATAAAATTTCAACACTAAATTAAAAGAGAGAGAAGACAACAGGGAAACAAAATCCAATAATTTTAAAGTCTATAATTAATGTGTCCGGTATCTGTAAATTTTGAACTGGGGAGCAGGACTTTCAGGTCATTAAGAAGCAATTTATTCTTCAACAAATTTATGACATTTTTAAAATATAATTTCAGTATTTAAATATGCTAAGTAATTGGCACATTTGTTATCGTTTGTTTACTATTAATTCGTTCAGTATATAAAAATAAAAAAAAATTCCTTTAAAATTATAAACTGCGATAAAATTTGTATTAGATTTCTTACAATATCTATAAAAGTTTAACATATTTTCAAGACCAATATTTTAAAGAAGAAATACCTTTACTTCTCTAAAATCATGATGTGAAAAAAAAAACATATGTTTATGTTGAAAGTTGAAATATTATAGAAACTAAAGAAAAGATTTTTTTTTTGAATTTTATTGAAAGAAAGCTAAATTTGAGACAGGACCAATAGCTTATTTTTGGCATGGAAGCTAAAAAAATTATTTCATTCGAGATGATGAATTTTGTTTTTTGTTATTAAAAGTAAGGAAGGGTTTCCAGCGAGAAAAATAGAAAAGAAACCGCATAATGTGGAAATGTGGGAAGCTGAAAATGAGCATCCGCAGCAATGGTCTGAAAACGAAAGCAGATTCAACTTGAAAAACAGAAAAGAGATATTATTGGGCTAGTAGAGTAAAAAGGCAATCGTGTTTCGAGAGGGTAGGTTTTCACAGTCATTGTCAAAATGATTTCACACTTCAAAAGTGTAAAAAGTACATATTAACACACACACAAATATAAGAATGAGATGGCTAAGCAGAAAGCGTTGAGTGTGAATTGTTATTATTGCACAACAGAAAGAAACTAGACAAGTTACGTAAGCTTTTTCACAGTATTTTGTTGGTTTGAAAGAAAAAACTACAGTGTCTCGCTCTTTAGAGAGTCATAAACAAAAGCTCATTATTGCTCTGCAAGCAAAAAAACATTTTGGAGTTTTGCATGCCACGCACGGTAGCGTGTGCGGCGGGAGGTACGAAATAAAAGTCATTAGCATTAGTGACTTCAGGATTCCGCTTTTTCTATTACATAAACTGTACTTCTTACACAAATCTAACCCTTCAAACTCAAACAACGGATAAAACTACCTGCGTGAATCCGGGAGTTACTTTATCTCCAAGTCAGGCCCACTTTCAAGGCCCAAAGTGAACGGCCCGGAATCGTTCGTAGCCTTAAGCCCAAGATTTCCATTTTTCGGGCAACGGCTGCTACTGTTACGAGATGAATCGGCTGGATGTTCTTACATCGTGTAAGAAGAGCTTTTATTGGAATGAATATAATAGAGCATAGAGGAATTATAATGATGAAACGGTTGGTGCATAATATGATTATATATGAATATGAGTATTAATGTTGTTATTATGACGAGTCAGCAATGATAGATAGGAAGGTTTGCACATCTGGCGCACCCGAAGCAGCAAGGGATTTGGCGTTGTAAAAGCGCGTAATGTTGTGATGTTGTTGTGTGCAGAAGCATGGCGAAAACAACAACTCAGGATTGAGAGAATTAAGAGAGGAACACCATTCAATCCAATCTCTCATTTCTCTTCCCTTCTCTGAAATTTCATTGCATGTCTGCACACCAATTTCTAACAATGGCGATGATCACGTGCCCGCGATGAAGCCTTTCACGACATTGTTGCGACCATCGAC


Gene Sequence:
>Vu_34807(-)
ATGCGTTGGTTACCCACCCTCATCTTCTCCCATTCCCATTCATCCTCTTCACCGTCAACCTCACCGTCACCGTCGTCGTCGTCGTCGTCTTCGGCTACTCGCAAATCCTCCTCTCCCACCTCATCTACCGTGTCCCACGCCAGGAAGCACACCCGCTCCGCCTGGTTCTTCGGCGGCACCAGAAAGTCGACGCGCTCCAGGAAGCTGAGCCACGTGGAGGACATAGACGCCGTCGTCATCACCCCCTTGTCGCGCTCCACCAGCACCTTCGATCGTTCCTCCGCCCCCTCCTCCGGACCTCAGCCGTTACCCTTGCCCAGAGCTATCGACTCCCGTTTGCCCTCCTCCAAAGATGCCGCCGCCGAAAAACCCAATGCCGCCGTCGACAAACCCAATGCCGCCGTCGATTTTACCCTCCCCGCTGGTTTTCAAATGCGCAGGTAATTCAATTCCTTCTGTCAACTTCAGTACTCGTTATTTCCTTTTTAGTTTCCGTTTCCTCGTGTACTATTCAAATAATTTTCATTGAATTTTTTAATTGTGCTTTGTCGTATTTTGGTATATTTTAATGTCATTAATTAATTGTGCTTTGTCGTATTTTGGTATATTTTAATGTCATTAATTAATTGTGCGTAGAGTTTCAAATTAGGAAAAAAATATTTAATAGAACTTAAATCCATCTGCACAGATATATCTGGGATGAGATTATGATGGTTCAGGATTATAATAGTGCATGTAGTATGTAATAATTTATTTCCAATCTTTTGTCTTTTATTCTTTGCTTTAAGTAAAACATGTGTAGCTTTAAATTAGGAATTAGTGAAATAATTTGTGTCGTGACATAGGGATTTGTGTGTGTACAGTGTATTCGCGAGGGAAGAGAATAGAAAAAATATGGAGCACGTGGAGACAAAGTCACCAAGGGTGGCGCCTCAGCAAGACACGAGCAGTGGTGCAAGTACAAGTGCTCAAGGAGATAACTTCTGGTTGAGTGTTCCTGCAAGAAGTGCTCCAACTAGTCCTTTTGCCAGTCCCAGAATCATCCCAAACATTGCCAAAACCGATGATTTTGTCCCGTACTATTATGTGTCACCCAAAGCCAACCAATTCTGGTCTGCACCAGAGATGCCAACATCCGACCCTTCAGCTGGGCACCCACCTCCTGCTTTCTTTGATTTATCAGCACTGCGCACTGATACCACCCTTTCTCCTCCCCATCAAAGCCCGCGGGGAAAAAGCCCCACCAAACACCCCAAAAGCCCCAATGCCCATTCTTCTTCTTCTTCTCCTTCTCCTTCTCCATCCGTACACCCCATTTTATCCCTTGACACCTCAATGGCACGTCGGGAAACCACTCTTCCTTACTCTGTCCATCCCTTACCCTTGCCTCCTTGGGCTGGGCCTGGAGCTCCCATAGTCTCACCTCCTGCTATCTTTTCCCTTCCTGTTGCTAAGACGGAACCCTTGCCAATGAAAAACCAGTGGCAAAAAGGAAAACTTATTGGCAGAGGTACCTTTGGATCTGTTTATGTTGCCACCAATAGGTATGTACTACTGCTAGACGCATGTTTCGGAAGCATTCATTATTCTTTTAAGCTCTTACATTCTCTCTTTCTTACAAGCTCGTCTTAAACACATTGTTTTGTTCCACGCAGAAAAACTGGAGCATTGTGTGCAATGAAGGAAGCAGAAGCCTTTTCCGATGATCCAAAATCTGCAGAGTGCATAAGACAGTTAGAGCAGGTTGCTTACCTCTTTAGTGTGTTTCTTAGCTTTATGTGTTGTACGAATTTTGTAATTACACTATCTTCCTATGTTGTACTTTGTGATTAAGATTATCCCACTTTAGTTATCTGTAATTCACCTTTTTTTTCATTACAAATTTTCACCTTTTTTCAGGAAATTAAAGTTCTTAGCCAACTGAAGCATCCAAACATTGTGCAGTATTTTGGTAGCGAAATAGTAAGGAATTCTTATTCATATGATTTGTTGTCCAAGATTAATGATTATTTATAGAACTACCATGTAAAACTTCTGCATCTTTGGGTTGTGTTCTGACAGGTAGAAGACAAGTTTTATATATATTTGGAATATGTACATCCTGGTTCAATGAATAAATACGTTCGTGAACATTGTGGTGCAATAACCGAATGGGTTCTTCGGAGTTTCACACGCCATATTCTTTCGGGGTTGGCTTACTTACATAGCAAAAAGACAATTCATAGGTACTGATCACATGCTTGATGTGTTACATAGAATGAGATCCTTGTCCAACTAGTATAGGAAATCGATAAGAAATATTTGCATAAATACTATAAGTTTTTCTTTTTCAGAAATTCCTGATTCAGTTTGCATTTGGGAGATCTGATGATGTGTTTTTTTTCTTTTACAGAGACATCAAAGGGGCTAACTTGCTTGTTGATTCTGCTGGTGTCGTTAAGCTTGCTGACTTTGGGATGGCCAAACATGTAAGTTGTCAAATTCCCTTTCTATTTCGCATTGTTGAAAATTGGTGTGTCTCCAAGTTCTTTGTTACTTGGTCTGAGTTTTTTACGAAGTACAGTTCTGTTCTATTTGGAAATTTCCTCGTTGGTTTCAACAGCACCTTTTCTCCTTTTGTGCTCCTTATAATGCTTTTGAGATTTCTGTGTCCACAGCTAACTGGACACGTTGCAGATCTTTCTTTGAAGGGAAGTCCATACTGGATGGCTCCAGAGGTATATTCTAACTGTTACTCCGTAGCCTCTCGGTTGTTCTCTATTGATACCCGTTTCTCGTGCAGCTTATGCAAGCAGTTGTAGAAAAGGATAATAGCGTTGAAGTAGCTTTTGCTGTAGATATTTGGAGTTTGGGTTGTACAATTATTGAAATGTTTACGGGAAAGCCTCCTTGGAGCGAGTATGAAGGAGTAAGCATCTACGAAATTTTTTTTTCTCCTTTTTATATCAACTTGTTATTCGGAACAATTCCCACAAGGTGTAGTCTATTAGAATTCTCTTATAACATTCTTTCTTTAACAAACTTTTTTATATCCTATTAGTTAAAATTTGAATAGATTCCACTAGTTTAGAAAGAGTTCCACCGCTAACTAAGAAATAAGATCCGCAGATTTATTGAAGCCTCCATGATTTTCAACAAATAAAAATTATTGCAACGAAAGTGTTAAGAGGATTAATATGCTGATATAGCATTTCTCATCTTATTGATGAAGTACCGAAGTATTCATTATAAAATAATGTTTCTTGGTTAATTAACTACAATGATGTATATTTAATTGGTAAACTCAGGTCTAACAACCAGCTTAAAGCACCTTAATGCAACTTCTTTTCTGTGCAGCCTGTGGATTTGTCAGAGATGCTGTATGTATACATGTTTTTTCATTTATGAACTAGGCCTGAAATTCTCATTTAATTATGCAGGCCGCAGCTATGTTTAAGGTTATGAGGGATACACCTCCTATACCAGAAACATTGTCAGCTGAAGGTAAGGATTTCTTGAGGCTCTGCTTTATAAGAAATCCAGCCGAGCGACCAAGTGCTTCAATGTTATTAGATCATAGATTTCTGAAAAACTTATGACACCCAGATGTTTCGTGTTCCACGCATCTGTATAATGGAGCACCCTTAATGGTAATATAAATGTTTGTCTCTCTTGCTTTTATCAAACCATGGTGCGTGGTGTTAAATTTATGAATTGATGACTTGACAGGATATCTACAGTCCCAGAGATTTGATCACATTTCCATTTCCTGTGAACATATTGCTGAGGGAAAATAGCCACTGCGAGGTGAGAATTTTTCATTATGATGTCCTTGCCATTATCCTCTGCTGGAAATGGAGATTGAATACGTTGCAGTGGCATCTCAGCGCTCTACTCGCTCTACTGTTGAAGTGCCTGCAACACTTTGGATGA