Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_34772 LG10 14376253 14378476 PREDICTED: probable serine/threonine-protein kinase At1g01540
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/C 14376255 start_lost p.Met1?
A/G 14376260 missense_variant p.Asp3Gly
C/T 14376270 synonymous_variant p.Ser6Ser
C/T 14376273 synonymous_variant p.Gly7Gly
T/A 14376293 missense_variant p.Leu14His
A/G 14376310 missense_variant p.Ile20Val
G/T 14376341 missense_variant p.Gly30Val
C/T 14376367 missense_variant p.Leu39Phe
G/T 14376407 missense_variant p.Arg52Leu
C/T 14376422 missense_variant p.Pro57Leu
C/T 14376527 missense_variant p.Pro92Leu
G/A 14376656 missense_variant p.Gly135Asp
C/T 14376831 synonymous_variant p.Asp193Asp
C/T 14376861 synonymous_variant p.Leu203Leu
T/C 14376874 splice_region_variant&intron_variant
C/T 14376887 upstream_gene_variant
T/C 14376895 upstream_gene_variant
C/T 14376906 upstream_gene_variant
T/C 14377036 missense_variant p.Leu236Pro
G/A 14377114 upstream_gene_variant
C/A 14377297 upstream_gene_variant
T/C 14377326 upstream_gene_variant
T/G 14377356 upstream_gene_variant
T/A 14377378 splice_region_variant&intron_variant
T/A 14377388 missense_variant p.Leu284His
G/T 14377619 upstream_gene_variant
T/A 14377786 splice_region_variant&intron_variant
C/T 14377811 upstream_gene_variant
G/T 14377958 missense_variant p.Arg412Met
C/G 14378321 upstream_gene_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_34772.1
MPDQSSGAAMNDQLSNPTSIFGLRLWVVLGVCVGAAIVLILFLISVWVAFKRSKANPVSIPDVSKEIQEIRVDHAPTPNPTHQPDPFPEPDPVPPTEEETNPLSYQRIQFEIGKNHRISYPERALLRSSSNDPAGAEPRLLDQVPTVIPEVSHLGWGHWYTLRELEDSTNAFAPENVIGEGGYGIVYHGILNDNTHVAIKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVDNGNLEQWLHGDVGPYSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLSKQWNAKVSDFGLAKLLGSDNSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVLTGRNPVDYSRPPEEVNLVDWLKKMVSNRNPEGVLDPKLPEKPTSRALKRALLVALRCTDPNAQKRPKMGHVIHMLEAEDSPYKEDRRARKDAGHSPNDRVGDGLKEEADVSVDDPKLETRTNPQIEKQ*


CDS Sequence:
>Vu_34772.1
ATGCCCGATCAGTCGAGCGGCGCCGCAATGAACGACCAGCTCTCCAACCCCACCTCCATATTTGGTCTCCGTCTCTGGGTGGTGCTCGGCGTGTGTGTCGGCGCCGCCATCGTCCTCATCCTCTTCCTTATCTCCGTCTGGGTGGCCTTCAAGCGCTCCAAAGCCAACCCCGTTTCCATCCCCGACGTCTCCAAGGAGATCCAAGAAATAAGGGTCGACCACGCCCCCACCCCCAACCCGACCCACCAACCCGACCCTTTTCCCGAACCTGACCCAGTTCCGCCCACCGAGGAAGAAACCAACCCTCTCAGCTACCAGAGAATCCAGTTCGAGATTGGGAAGAACCACCGAATCTCCTACCCCGAACGTGCCTTGCTTCGCTCATCTTCCAACGACCCCGCCGGTGCTGAGCCTCGCCTCCTCGATCAGGTTCCCACCGTCATTCCCGAAGTTTCTCACTTGGGCTGGGGCCACTGGTACACTCTCCGAGAGCTTGAGGATTCCACCAACGCCTTCGCCCCTGAGAATGTTATTGGCGAAGGAGGTTATGGAATTGTTTACCACGGTATCTTGAACGACAATACTCATGTTGCCATCAAGAACTTGCTCAATAATAGGGGGCAAGCTGAGAAGGAATTTAAGGTTGAAGTGGAAGCTATAGGACGGGTTCGCCACAAGAATTTAGTCAGGTTGCTTGGTTATTGTGCTGAAGGAGCTCATAGAATGCTTGTTTATGAGTATGTCGACAATGGTAACTTGGAGCAGTGGCTACATGGGGATGTTGGGCCTTACAGTCCTCTAACATGGGAAATTCGGATGAACATTATTCTGGGAACGGCTAAAGGGCTAACTTATTTACATGAGGGGTTGGAACCAAAAGTTGTTCATCGTGATATTAAATCAAGCAACATTTTGCTCAGTAAGCAGTGGAATGCAAAGGTGTCAGACTTTGGCCTCGCCAAACTCCTTGGCTCTGACAACAGTTATATCACCACCCGTGTCATGGGTACTTTTGGATATGTTGCTCCTGAATATGCAAGTACTGGCATGTTGAATGAACGAAGTGATGTTTATAGTTTTGGAATTCTGATCATGGAAGTTCTTACAGGAAGGAACCCTGTTGATTATAGTCGGCCTCCAGAAGAGGTGAATTTGGTAGACTGGCTGAAGAAGATGGTCAGTAACAGGAACCCAGAGGGGGTGCTGGATCCCAAGCTTCCCGAGAAACCAACTTCAAGGGCATTAAAACGAGCCCTTCTTGTAGCCTTACGTTGCACTGATCCTAATGCACAGAAGCGACCTAAAATGGGGCATGTGATACACATGCTTGAAGCTGAAGATTCCCCTTACAAAGAGGATCGCAGAGCTAGAAAGGATGCAGGACATTCACCCAATGACAGAGTAGGGGATGGGTTGAAAGAGGAGGCAGATGTATCAGTTGATGATCCCAAGCTTGAGACAAGAACGAACCCTCAAATAGAAAAGCAATAA


Promoter Sequence:
>Vu_34772::LG10:14374253-14376253(+)
GAAAAACAGGCGTACGCGCGTTAGCAAACCCATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTAGTATTGTTTGTATTGTTTTATGCTTAGAAATTTAATAATAGTTAGATTTCACCATTTATGAAAAAGTTCACATATAGTATACATTATTGTTTTTGTGAAATGATACAACATATATTTGAAATTGCGTAATGGACATACCATATACCATTAAATACATTTATTTAATATCAATTAGATGTTTTGTGATTTACTAAGGGAGCTAAGTCTCTGATGCCTAACAACTTCCATAATCTAATCATTTTTATTCAATTAAGGATGGTAATTTGATAATTTAAATGTACACATTTTTATAGTTAAATAGTAAACCTTAAAATTTTCACACAGCGAACAATAACATGTTAAATCATTTTAATCTAATATTTACTTATGTAATTATAAAATGACTTTAATAAAAAATGTCTAATATAAGGATGATTAAGTATAAGATTATATTATACTTGTTCATCGTTATTATGAAGTTAATAAAATATTTCTTCTTCTTCTAATTATAATAAGGACAACTTTTGTCCTAAAGGAATCAAAGACAATTTTTCACAAAAATGTGATTTAAAAAAGAGGCAACTCATTTCTATTGTCAACATTACCTCAATTCTTACTCATAAAAAAATAGAGAAAAAATAGAAAAGAAACAAATTTTCATAAGAATTTCCTTACCATCCAGATAAGAAAAAAAAAGGCAAAGGAAAAGAATATTTTCAAAATTACTTATTTTAAATTTTTCTAAAATGTGTTATTAATCCAAATAAACATCTTATTTATTTTATGAAGAACAAATTATCTAACATTGTTGTAGAGTAGTAGTTCATGACTGTTAAATCTTAATAATTACACGATCCAAGAATCTATGCTTACAAAATCCACCCACGTAACATGTAAGTTGAGATTCGAAGTCGTTTAAGATAGAACAGGATACTCTCACTCTCACCAAACTAGCAGACCCATTGGCCTCTTTCTATATTCACTTTCAACTTTTGTCATAGTAAGCATCCATATATACAAATCAAACTAATTAATATCCGTGGACCCTATTAGACCATGTTGGGTTGCTAAGAATTATGTCCACCCAACAACGATTAACTTACCTAATCCAATTATAATTTCCCCATGCATCTTAAATGTTGCAACAATTTTAATTAAAACGCCAATAACTCCAATAAACACTTAAAAATTAGCACAACAACAACACTTACACACCAATACATTTTTCTGGACTCAAAATTTTAGATTAAAGAATCGTGAATAGAAAAACTGGCTAAAGCTAATAAATCATTAGTAAAACTCACATACACTTCACATTTATAAGACTAATTTGTTGACTCGCAATCATTATTTGCACCGTTGATATAAAGCATCTATGAGTGTGTTACTCAAAAGTTAAAGTGAGTATTTATTTTATCCGGAAAAGTATAGGTGATTTTAACTGGCACGAGATTTTCTGAAAACGGAGTTCATTTGGTTAAAGTAGTATTTAAAAGCCACTTTTCTACTATATGGTATTTGTTAATTATATATATATAGAATTAATATTGAATAAAAGAATTACTTAGAGTATGCAAAAACTAAAGGGATGGAAAAAGCAGTGAATAGAATGGAGTGGAGTTGAGTGACAGTGAGAATTGTTGAACGACACACACGTAGCAGTCTCCGAGTAAGTGCGTAGTTCCCACACACCACACAGAGACAGAACAAAACAAAACACAGTGACAACACTGCAATTGATTGCATCCAGCATCCTGCGTTTTCTCTGGGTCCCACCATGCCAGCTACCACTGCCTCCATTCCTCACCCCTCTCCTTTCTTCTTCTTCTCCTTCTTCTGCTTCTTCTTATTGTACTTTTTTTCACTATCTAGTTTCGTCTTCGCTGGAGGGAGGAAGGAATGAACGAATGAATGAACAGCAA


Gene Sequence:
>Vu_34772(+)
ATGCCCGATCAGTCGAGCGGCGCCGCAATGAACGACCAGCTCTCCAACCCCACCTCCATATTTGGTCTCCGTCTCTGGGTGGTGCTCGGCGTGTGTGTCGGCGCCGCCATCGTCCTCATCCTCTTCCTTATCTCCGTCTGGGTGGCCTTCAAGCGCTCCAAAGCCAACCCCGTTTCCATCCCCGACGTCTCCAAGGAGATCCAAGAAATAAGGGTCGACCACGCCCCCACCCCCAACCCGACCCACCAACCCGACCCTTTTCCCGAACCTGACCCAGTTCCGCCCACCGAGGAAGAAACCAACCCTCTCAGCTACCAGAGAATCCAGTTCGAGATTGGGAAGAACCACCGAATCTCCTACCCCGAACGTGCCTTGCTTCGCTCATCTTCCAACGACCCCGCCGGTGCTGAGCCTCGCCTCCTCGATCAGGTTCCCACCGTCATTCCCGAAGTTTCTCACTTGGGCTGGGGCCACTGGTACACTCTCCGAGAGCTTGAGGATTCCACCAACGCCTTCGCCCCTGAGAATGTTATTGGCGAAGGAGGTTATGGAATTGTTTACCACGGTATCTTGAACGACAATACTCATGTTGCCATCAAGAACTTGCTCAATAATAGGTCCTTTCCTTTCCTTTCCTTTTTTTAGCAATCCTCCTTTGCATCGTCGACCTAATAATAAGATTGATAATCGCAGGGGGCAAGCTGAGAAGGAATTTAAGGTTGAAGTGGAAGCTATAGGACGGGTTCGCCACAAGAATTTAGTCAGGTTGCTTGGTTATTGTGCTGAAGGAGCTCATAGGTATTCTTTTCTCTTCATTTTTCAGCTTCCTCCTTAATTCACCACCACTGTTTTCCCTTTTTTGTCCTTGTTCCTGTGCGATAATTATGAAGTGACAATTTTTTTTCCCTCCCAGAATGCTTGTTTATGAGTATGTCGACAATGGTAACTTGGAGCAGTGGCTACATGGGGATGTTGGGCCTTACAGTCCTCTAACATGGGAAATTCGGATGAACATTATTCTGGGAACGGCTAAAGGGTAAACAGCAAAATTCCTTCTTTTCAAATATCTTCCATTATTATCCGTCGGCGAAAATGCATTTCCGTGTTATAACTGTTTGTTTTTCATCAGGCTAACTTATTTACATGAGGGGTTGGAACCAAAAGTTGTTCATCGTGATATTAAATCAAGCAACATTTTGCTCAGTAAGCAGTGGAATGCAAAGGTGTCAGACTTTGGCCTCGCCAAACTCCTTGGCTCTGACAACAGTTATATCACCACCCGTGTCATGGGTACTTTTGGGTTAGTATAATCTTCCTTTTCCGTTGCTCCATTCCTTCCTCCAAGTATTGTTCATAACGAGTTTTTGCCAGCAATTTTACTTATCCTTCTATTTGCAGATATGTTGCTCCTGAATATGCAAGTACTGGCATGTTGAATGAACGAAGTGATGTTTATAGTTTTGGAATTCTGATCATGGAAGTTCTTACAGGAAGGAACCCTGTTGATTATAGTCGGCCTCCAGAAGAGGTTTTTTCGATAAATTTCAGTGCTGTGAACCTCCCTGTCATTGCATTCTCTTCATTTGTTTGTAACTAAAAACTCTAAATTTCCAGGTGAATTTGGTAGACTGGCTGAAGAAGATGGTCAGTAACAGGAACCCAGAGGGGGTGCTGGATCCCAAGCTTCCCGAGAAACCAACTTCAAGGGCATTAAAACGAGCCCTTCTTGTAGCCTTACGTTGCACTGATCCTAATGCACAGAAGCGACCTAAAATGGGGCATGTGATACACATGCTTGAAGCTGAAGATTCCCCTTACAAAGAGGTAACATTTAGAAGTTAATTCAACCTCAGTATAGTGCTAGTTAATGCATAATTAGCGAAGTATAACAAGTGTTTCTAGAGGATAATTAAGATGTGACAGTTAAAAGGAACAACATATAATACTCAATCAAAAAACTAAATAACAACCAATCCCTTGTCTTATTATGAAGTTTCCATATGCAGCAGAAAATGGAGTTGTAGCATCAAATGTAGTTTCTAATTTCGTGCCATAGTTGATTTGAACTCTTAATATTTATTTATAATAGGATCGCAGAGCTAGAAAGGATGCAGGACATTCACCCAATGACAGAGTAGGGGATGGGTTGAAAGAGGAGGCAGATGTATCAGTTGATGATCCCAAGCTTGAGACAAGAACGAACCCTCAAATAGAAAAGCAATAA