Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_34771 LG10 14366360 14370980 PREDICTED: transcription factor SPATULA isoform X2
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/A 14366378 missense_variant p.Gly7Arg
G/A 14366403 missense_variant p.Arg15His
C/A 14366404 synonymous_variant p.Arg15Arg
C/T 14366417 synonymous_variant p.Leu20Leu
T/A 14366418 missense_variant p.Leu20Gln
C/T 14366423 missense_variant p.Arg22Trp
A/C 14366445 missense_variant p.Glu29Ala
T/C 14366451 missense_variant p.Phe31Ser
G/A 14366462 missense_variant p.Gly35Ser
G/A 14366506 synonymous_variant p.Thr49Thr
C/T 14366518 synonymous_variant p.Cys53Cys
A/G 14366520 missense_variant p.Asp54Gly
C/T 14366533 synonymous_variant p.Asn58Asn
G/A 14366537 missense_variant p.Ala60Thr
T/*,C 14366547 splice_donor_variant&intron_variant
G/A,C 14366564 intron_variant
G/A 14366565 intron_variant
G/T,C 14366573 intron_variant
A/G 14366583 intron_variant
G/A 14366588 intron_variant
G/A 14366603 intron_variant
A/G 14366617 splice_region_variant&intron_variant
G/A 14366647 synonymous_variant p.Leu70Leu
A/G 14366651 missense_variant p.Lys72Glu
G/T 14366653 missense_variant p.Lys72Asn
C/T 14366658 missense_variant p.Ser74Leu
C/T 14366672 missense_variant p.Arg79Cys
G/A 14366673 missense_variant p.Arg79His
A/G 14366678 missense_variant p.Asn81Asp
A/G 14366679 missense_variant p.Asn81Ser
G/A 14366683 synonymous_variant p.Leu82Leu
T/C 14366688 missense_variant p.Leu84Ser
C/T 14366721 missense_variant p.Ala95Val
T/C,* 14366743 intron_variant
G/T 14366752 intron_variant
C/G 14366754 intron_variant
C/T 14366791 intron_variant
G/A 14366811 intron_variant
G/T 14366814 intron_variant
G/A 14366820 intron_variant
G/A 14366859 intron_variant
G/A 14366862 intron_variant
C/A 14366876 intron_variant
G/A 14366891 intron_variant
T/C 14366917 intron_variant
C/G 14366932 intron_variant
G/A 14366935 intron_variant
T/G 14366955 intron_variant
G/A 14366956 intron_variant
G/A 14366987 intron_variant
G/A 14366988 intron_variant
A/T 14367005 intron_variant
A/T 14367006 intron_variant
C/T 14367013 intron_variant
C/T 14367040 intron_variant
G/A 14367041 intron_variant
C/G 14367047 intron_variant
C/G 14367082 intron_variant
T/C 14367117 intron_variant
C/T 14367120 intron_variant
T/A 14367144 intron_variant
A/T 14367145 intron_variant
T/C 14367343 intron_variant
C/T 14367394 intron_variant
C/T 14367472 intron_variant
T/G 14367536 intron_variant
G/A 14367538 intron_variant
A/G 14367541 intron_variant
G/T 14367579 intron_variant
A/G 14367581 intron_variant
T/A 14367645 intron_variant
G/A 14367852 intron_variant
A/G 14367884 intron_variant
A/T 14368210 missense_variant p.His200Leu
G/T 14368728 splice_acceptor_variant&intron_variant
T/A 14369272 intron_variant
A/G 14369640 intron_variant
G/T 14369743 intron_variant
T/A 14369818 intron_variant
T/A 14369863 intron_variant
C/T 14370036 missense_variant p.Pro341Leu
A/G 14370259 synonymous_variant p.Thr415Thr
C/T 14370521 intron_variant
T/A 14370600 missense_variant p.Ser448Arg
C/G 14370609 synonymous_variant p.Leu451Leu
A/T 14370718 splice_region_variant&intron_variant
C/T 14370730 intron_variant
T/G 14370752 intron_variant
A/T 14370795 intron_variant
C/T 14370802 intron_variant
C/T 14370805 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_34771.1
MARAGGGRTVVDAIRDSILLQRRSFYIFEIFGSLGSMMNARMKMLPWLTSCPCDGGLNGAAAVDEDVRELAKKSNSGRRCNLRLRVLGEKMKMVAGMLGACNHGTSTPLSDIPKTETRTAPATAGMGDMYHFDKNLSSQDEISLFLRQILLRSSPSSSSSPHSVPGSCNSNISHQNVNSHASFTPSHLQHGKISNLGSTATFVSPSGTCGSFKAQTASAANVSSSSVLVSENENDDYDCESEEGVEALAEELPTKPIPSRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGLTLHPMCFPEGLQPLQLSQMGMELSERNRSTPLNMTATLPLHQENPLHYTSNLPSKHILPNQPSAPYPSFINNPETSFGLESRIQPETKPLQHKGGPSGQPSAIHSDANTLVVKEFESGTTVSLSFDTQTCEPCIGRREQSGVIIRNSEANIVVTSQLSSTRDCNAVQREKGGGSGNSKTEIFEVYKFSLAMLFEFWFPRKSRNTDPLS*


CDS Sequence:
>Vu_34771.1
ATGGCTCGTGCAGGAGGAGGGAGAACTGTGGTTGATGCGATTCGCGATTCGATACTTCTGCAACGGAGAAGTTTCTACATCTTTGAGATTTTTGGCTCTCTGGGTTCGATGATGAACGCGAGAATGAAGATGCTTCCATGGTTGACGTCCTGCCCTTGCGATGGTGGTTTAAACGGTGCTGCTGCGGTTGATGAAGATGTTCGCGAACTGGCGAAGAAATCGAACTCGGGACGGCGTTGCAATTTGCGTTTGAGGGTTCTGGGGGAGAAGATGAAGATGGTTGCTGGAATGCTTGGAGCGTGCAACCACGGGACTTCCACTCCACTTTCTGACATACCAAAAACAGAAACAAGAACAGCACCAGCAACCGCAGGAATGGGCGACATGTACCACTTTGACAAGAATCTCTCTTCGCAGGACGAAATCTCACTTTTTCTGCGTCAGATTCTCCTCCGTTCATCTCCTTCTTCTTCTTCATCACCCCACTCCGTCCCCGGATCCTGCAACTCCAACATATCTCACCAAAACGTCAATTCTCACGCTTCTTTCACGCCCTCGCACCTCCAACACGGCAAGATCTCGAACCTTGGTTCCACCGCCACTTTTGTCTCGCCTTCTGGCACTTGCGGTTCCTTCAAGGCCCAGACTGCTTCTGCTGCAAATGTGTCTTCTTCTTCTGTTTTAGTGAGCGAGAACGAGAATGATGACTATGATTGTGAAAGTGAGGAGGGTGTCGAAGCTTTGGCCGAAGAACTTCCAACAAAGCCTATTCCTTCAAGGAGTTCATCTAAGAGATCAAGAGCTGCTGAAGTTCATAATTTGTCTGAGAAGCGAAGAAGGAGTAGGATCAACGAGAAAATGAAGGCCTTGCAAAATCTAATTCCGAATTCTAACAAGACGGACAAGGCTTCAATGCTCGATGAAGCTATTGAATACCTTAAACAACTTCAGCTGCAAGTACAGATGCTGTCAATGAGAAATGGGTTGACTTTGCATCCTATGTGCTTTCCAGAAGGCTTACAGCCACTGCAGTTATCTCAGATGGGCATGGAACTGAGTGAAAGAAACAGGTCTACCCCTTTAAACATGACAGCTACTCTGCCTCTCCACCAAGAGAACCCCTTGCACTACACATCCAATCTACCTAGCAAACACATTCTGCCAAATCAGCCATCTGCACCATATCCTTCATTTATTAACAACCCAGAAACTTCTTTTGGGCTGGAATCCCGAATCCAACCAGAAACAAAACCTCTTCAACACAAAGGAGGACCTTCTGGGCAACCAAGTGCTATCCATTCAGATGCTAATACATTAGTTGTGAAAGAATTCGAGTCAGGCACAACAGTATCACTCTCCTTTGACACGCAAACATGCGAACCATGCATTGGCCGAAGAGAACAGTCAGGAGTGATCATAAGAAATAGTGAGGCCAACATTGTTGTTACATCGCAGTTAAGTAGCACACGAGACTGCAATGCAGTGCAGAGAGAAAAAGGTGGTGGCAGTGGGAACTCGAAGACCGAGATTTTTGAAGTTTACAAGTTTAGTCTTGCAATGCTTTTTGAATTTTGGTTTCCCCGTAAAAGTAGGAATACCGATCCTTTGAGTTGA


Promoter Sequence:
>Vu_34771::LG10:14364360-14366360(+)
ATTTAAGTACGTACCTCTTGGTAGCTGGGCTGCATTATGTTATCTTAAGATCTCAAGGTTTGGTTCAACATATATGATAAATGAACTTCTTGAAATCCAAAATATTGTTCCCAGTAGATCACATTGTCGTATGAAAGATTGGATTCATACTCAATTCTCCTAAATGGAGCATTACACTGTGCTGTTTAAAATTTAATTAAATTAAATACAATCTATAAGACACTTCATGTAATAAAGATTCAATTTCTTATTCATCACATTATTATAGAATATTAATTTTGTCTGCCGTACTTAAATCCTAGTGGTTATTATTGATTACTTTTATTTTTTGTATTTTATTAATTTTTTAAATTTTGTTAATTTATATCTTGATTTAGTTTATTCAATTTTAGAGCAAATTAGAGTCACACACAATTGATTTTATGTTGTTAGAGGTGAATTTGTATCTGACAATTTAGCTCAATTAAGATTAAAAAAAACAAAGGTATAATAACTGATAAATGCGACAGTGTAATAAACAATATAAATTTTTTTAACAAAGTGTTAGGAAAAATAAACATCAAATTCCAGTCAACATAATTTTACTGCTATCCAAAGGCCATTCGTCATCTTCCATGAATAGAACTCCTCGTGGTAAAACATATAGACGAGTTTCTCTTTCATTTTTTTGTTTACTTTATTTTTTAATTATCATTATTTATTTCCCATCACGATATTTATAATATTCATTTCTCTATTTCTTCCTTCCACTCATACACCAACAATTAAATATAACTTTTTTCCATGAATAAATATTCTATCAATTAAAGTTAACTTTCCAGTTGAATACATATTATTTGATTCACCTACAAGTATTGTTACTCTTAATTTCGTTTCTAATATAAAATGTATTAAATTATTTTTAATATGCATAAGGTTTTTTTTTTTTATCGTTATGATGTCTAGATAACTTTGCATTGGCATGTAACTTACTTATGTATTATTAATTTATTAATATGACATATATATATATATATATATATATATATATATATATATATATATATGATAACTAATTTTAATGTACTATTAATTTGTTCCGTATAACAATCAAGAGTACACAACATACAATAATTGAATTAAAAATAGACATAAAAAGAGAATATCCAAAGTAATAAAAGAGAATGAAGGATTTTATATACACTGTGAAAAAATATATATAATTGATATAATATATATATATATATATATATATGATAACTAATTTTAATGTACTATTAATTTGTTCCGTATAACAATCAAGAGTACACAACATACAATAATTGAATTAAAAATAGACATAAAAAGAGAATATCCAAAGTAATAAAAGAGAATGAAGGATTTTATATACACTGTGAAAAAATATATAATTGATATAATATATATATATATATATATATATATATATATATATATATATATAATTAAGTTAGAAATTAACAAATAATTGATGTGTTTAACGTATTTTTTTATAGGCGTGGGTGTGAATAAATTAAAGGTTAAATTCTTTTAGTTGTCTCTATTTATGTAGGTTTTTTTTTTTCAGTTTGATCTCCGTTTTTTTAAAATTCTCAATTGAGTTTGGAATAGTGTTAATTTGAATCAATTGAGCTTTTTGTCGTTAATTTGATTTAACGGGGTTACGTTTTTGCTGAGATTGAAGGTTGACGTGTCAATTTTTTTTAAACGGGGCATGCTGAGAGTTGAATACGTGGAATTTGATGATTAAAAAATCTAAGAGGAATGTGCTTGTGAGAGTGTTGTGAACCTTGCACGAGACTATGTGATGTTGTTCTTCTTCCTTACGGTGTACGAAGGTGGACATTGATGGAGAAAGGAGATCTTGCGATTTGGATTTTCGCTTGATGGTTATGAGGCGCAGCGCGATGAAGATGATTGTGGTTGCTGGACCAATTTCGCCCAATCTTCATTAGGGTTTTTCTGTGATTGGGTTTTCCTTTGCAGGTCGAGGAAGACAGTGA


Gene Sequence:
>Vu_34771(+)
ATGGCTCGTGCAGGAGGAGGGAGAACTGTGGTTGATGCGATTCGCGATTCGATACTTCTGCAACGGAGAAGTTTCTACATCTTTGAGATTTTTGGCTCTCTGGGTTCGATGATGAACGCGAGAATGAAGATGCTTCCATGGTTGACGTCCTGCCCTTGCGATGGTGGTTTAAACGGTGCTGCTGCGGTGCGAAAAGGAAGCTCTGGGTGGCGGGAGTCGCGACAACTTGCAGTGTTGGGTGGTGTTTGAATGACGGTAAGGGAGGTTGATGAAGATGTTCGCGAACTGGCGAAGAAATCGAACTCGGGACGGCGTTGCAATTTGCGTTTGAGGGTTCTGGGGGAGAAGATGAAGATGGTTGCTGGAATGCTGTAAATTGATTGTGCGACGACGACGCAAGGTTGTCTTGCGGCGGCGATGCTCGTGTTGGGCGATGGCGAGGTTGCGGCAAGACGGCAGGGTGGCTGACCGCGGCCTAGGGTTGCCCATGGTGCTGACGGTGGCACAAGCACATTTCTCTCAACATGCAACGTTTAAAAAAATTGACACGTCAACCTTAACAAAAACTTAACCTTGTTAAGCCAAATTAACGACATGAACTCAATTGATTCAAATTAACACTATTTAGGACTCAATTTGAGATTTAAAAAAAACAGAAATCAAACTGAAAAAAACCTACACGGACAACTAAACCGGGTTTAACCTAAATTAAAACATGTAGACAGGGCATTGAAAATTGTTTTATTTTAGTTTATTTTATCATAATAATATTAATAATAATTATTATAATGAAGGAATCGAAGTATTGTATTAAAGAGTGAGAGTAAAAAACAGTAGGAAAGAGGGTAATGTGGGTCACGTGCCACTGGCACATGTAGTGGAGCGTGCAACCACGGGACTTCCACTCCACTTTCTGACATACCAAAAACAGAAACAAGAACAGCACCAGCAACCGCAGGTATCGTATTTGTGGTCATTAAGATTAATAACATATTCTCATCTCACATCACACATGTTATCGTCTTCATCCCACTCTTTTAATTTATTTAAGATCCTTATTAATCATTATTTTAACAAATATTTTCAATATCTTCTTTTTCAAAATTTACTTTCCCTCATCTCTTAAATTTAATATTTCTTTATTTATTTTAAAATGTAAGTATTAATTTAAAAACATAGGGAAAATAGTTAAAAAAATGTATTAATAACTTTTGTAACAGCATCATTATTTAATATTTGATTCAGTAGCAGAAGAGAAGGAGAGAGAAGGAGAGGGGATTATTTTTATTTTTGACATCTTTTGAGTGGAAAGTGAGGCACAGTGAAAGGTGATGGCGCGTGAGTGTGAGTGTGAGTGGGAGTGTGTGTGTGAGAGAGAGATAGGCATAATAACACAACAACACAAGTCTGATCCAAAACCCGCCCACAATTCCCCATATCATGTCGTGTTCATGCCCTTCTTCCTTTTCCTTTTCCTTTTCCTTTTCCACAAGTTTCTGAAAGTGGTTGGTTGCATTACCATTTACTACTTTCTTTCTCAACACACGGAAACAAAATCAACAAAACCACCCCAACTCAATCCATCTCTGCATTCTTCTTTTTTTTCTGCTCACACACCTGTAGGAATGGGCGACATGTACCACTTTGACAAGAATCTCTCTTCGCAGGACGAAATCTCACTTTTTCTGCGTCAGATTCTCCTCCGTTCATCTCCTTCTTCTTCTTCATCACCCCACTCCGTCCCCGGATCCTGCAACTCCAACATATCTCACCAAAACGTCAATTCTCACGCTTCTTTCACGCCCTCGCACCTCCAACACGGCAAGATCTCGAACCTTGGTTCCACCGCCACTTTTGTCTCGCCTTCTGGCACTTGCGGTTCCTTCAAGGCCCAGACTGCTTCTGCTGCAAATGTGTCTTCTTCTTCTGTTTTAGTGAGCGAGAACGAGAATGATGACTATGATTGTGAAAGTGAGGTACACATCACACTTTATTACTATTATTATATTTATTATTATTGTTTACACTCTTTAAGTTTGAGGTTCTCTTGGCAGTTTAGCTTCTGCACAAAAATGTATTTTTCTTTATCGTATTACTGTCGGTTCCCAGTTAAACACTCTAACACCAACATGTGTAACTTTGTTTTTTTTTTTGGAGTATTATGGGTTATTATCTTGTTGATAGTGATATCGATAACTGTGAGTGTGGCAAAAAAATAGAAATTTGTTTCCTGGACTGTTTTTAGGGTCGATCTTTGAAAATGTTTTGGTTGGGGTGGGAAAAATTCGTTGCTTTTGGGAGGGGCACTTGAATTTTGAAGTGGAGATTGCACTGCTTCTTTACAATTGCTTCGTAATTTCTGAACGTAGGAGGGTGTCGAAGCTTTGGCCGAAGAACTTCCAACAAAGCCTATTCCTTCAAGGAGTTCATCTAAGAGATCAAGAGCTGCTGAAGTTCATAATTTGTCTGAGAAGGTCTGTGAATTTCTGATGATGGCTGTTTGTTGTACTTGGTTTGGTTTTATTTTTATCATGCTTGTGTAATTTTCCTTGTGGGCTTTTGTTCGGGCCTTGGACTTGTTGAACAGCGAAGAAGGAGTAGGATCAACGAGAAAATGAAGGCCTTGCAAAATCTAATTCCGAATTCTAACAAGGTATGCAAGTTTCTTCAACCTTGGTTCTTACGACAGGTGCATAGTTCTTTGTTATTAGTTGGTCTCGGTAATTAATTGCTTCATGTGTGTGGCAGACGGACAAGGCTTCAATGCTCGATGAAGCTATTGAATACCTTAAACAACTTCAGCTGCAAGTACAGGTCAGTATCGCTTTTTATTTCCTGCAAATTTTGTCGTATTTGATGGGCTGAAAGCTTCATTTTCTTCAGTACTTTCTAACTCAAGTCGCAATTTAATTTAAATGAAAATAATTGTTAGTCTGTGAATTTTGATGTTCTAGTTACTGTTTACAGTCTTGACTGAAAGTCTTTTCATGTGAACAGTATATGTATGGGAAACTGCACAATATCGGAAAATTTGAGAAAATCCTGACTGGAAACTGTTGTCTTCTGGTCAAATATAAACTGTAAACAAATCGATGTTGATACATTTAATAAAGTTAACGAGTTTATGTATCAAAATTTTATCATTCGAAGTGTCAGAGATTTTCTTTGATGCTGTGATAATCCAGTGAACTTGCCAGTAGCTTCTTGTTATTTGTTTACATATATATTGTTACTGGACAGTCAAAAATTCTGGCATTGTTTAAAAGTTGAGTTTGAGAATAGCTTATATATATAAATCTTCTTTCTGAGTTGGGTACCCAATATATATATATATATATCCCTGGTGGTGTTGAAATCGTATTGAATATTTGAATTTTGAGATGGTAAGCCTCTTAGTTGCTAGAGTAAAAGGAAACCTTTCTGGAATTAACCTTAGTTCATTGTGTAAAAGGACGACATAGACAGGTCCCATCAAACAAAACATATTCCAAAGAGTTTGGTCCTCCTGATATATGTTTTTTCCTATACATACTGAAAAGAGTTTTATACGATAGAATTGGCTTTTTGAAAGTGGACTGGTACTGAACTTAATGAGATTTTATGACAAAATTTCAGATGCTGTCAATGAGAAATGGGTTGACTTTGCATCCTATGTGCTTTCCAGAAGGCTTACAGCCACTGCAGTTATCTCAGATGGGCATGGAACTGAGTGAAAGAAACAGGTCTACCCCTTTAAACATGACAGCTACTCTGCCTCTCCACCAAGAGAACCCCTTGCACTACACATCCAATCTACCTAGCAAACACATTCTGCCAAATCAGCCATCTGCACCATATCCTTCATTTATTAACAACCCAGAAACTTCTTTTGGGCTGGAATCCCGAATCCAACCAGAAACAAAACCTCTTCAACACAAAGGAGGACCTTCTGGGGTAAGCTCATCAACTTTTTAGTATGTGAAATGTTGTTAAAAGCATTAGTCATTGTAATTACATGTTTCCCTTGAATTGTAAAGCCAATACGCGGGGAAGACATTTTGCATTACCAGCAACCAAGTGCTATCCATTCAGATGCTAATACATTAGGTAGTTCTCAAGGTATTTGCAATTTAGATTTACTACAGAATAAACTAAATATTCCATCACTATGCTATATATATACACACACACAGTATCTCATGCTCAAATAATATGTTTTTGGAAACCCCAGTTGTGAAAGAATTCGAGTCAGGCACAACAGTATCACTCTCCTTTGACACGCAAACATGCGAACCATGCATTGGCCGAAGAGAACAGTCAGGAGTGATCATAAGAAATAGTGAGGCCAACATTGTTGTTACATCGCAGTTAAGTAGGTAACTGGTATAGCGCTAGGTATATGATGATGCTTAATGATATATGCATATGGCATATGTGACGATATGTATGTATGTTGATGCATGCGACAATATGTGTTGAAAAGCTTTTCAGCACACGAGACTGCAATGCAGTGCAGAGAGAAAAAGGTGGTGGCAGTGGGAACTCGAAGACCGAGATTTTTGAAGTTTACAAGTTTAGTCTTGCAATGCTTTTTGAATTTTGGTTTCCCCGTAAAAGTAGGAATACCGATCCTTTGAGTTGA