Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_34755 LG10 14144846 14146397 PREDICTED: probable WRKY transcription factor 15 isoform X1
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/A 14144870 5_prime_UTR_variant
C/T 14144881 5_prime_UTR_variant
T/A 14144893 5_prime_UTR_variant
T/C 14144895 5_prime_UTR_variant
A/T 14144907 5_prime_UTR_variant
T/C 14144916 synonymous_variant p.Pro2Pro
T/C 14144934 synonymous_variant p.Gly8Gly
C/T 14144946 synonymous_variant p.Asp12Asp
C/T 14144955 synonymous_variant p.Ala15Ala
G/A 14144967 synonymous_variant p.Ala19Ala
T/A 14144969 missense_variant p.Val20Asp
G/T 14144972 missense_variant p.Arg21Leu
C/T 14144978 missense_variant p.Ala23Val
G/A 14144980 missense_variant p.Ala24Thr
G/A 14144982 synonymous_variant p.Ala24Ala
A/T 14145010 missense_variant p.Ile34Phe
T/C 14145017 missense_variant p.Leu36Ser
C/T 14145019 synonymous_variant p.Leu37Leu
A/G 14145050 missense_variant p.Gln47Arg
C/T 14145072 synonymous_variant p.His54His
G/C 14145075 synonymous_variant p.Ala55Ala
C/T 14145078 synonymous_variant p.Thr56Thr
T/G,A 14145082 missense_variant p.Ser58Thr
T/C 14145095 missense_variant p.Met62Thr
G/A 14145097 missense_variant p.Glu63Lys
C/T 14145107 missense_variant p.Ser66Phe
C/T 14145108 synonymous_variant p.Ser66Ser
G/A 14145124 missense_variant p.Ala72Thr
G/A 14145130 missense_variant p.Val74Met
C/T 14145134 missense_variant p.Ala75Val
C/A 14145140 missense_variant p.Ser77Tyr
A/G 14145142 missense_variant p.Lys78Glu
G/A 14145144 synonymous_variant p.Lys78Lys
A/G 14145157 missense_variant p.Ile83Val
G/A 14145168 synonymous_variant p.Leu86Leu
G/A 14145173 missense_variant p.Arg88Gln
C/T 14145182 missense_variant p.Thr91Ile
G/T 14145185 missense_variant p.Gly92Val
G/A 14145192 synonymous_variant p.Ala94Ala
C/T 14145193 missense_variant p.Arg95Cys
C/A 14145208 missense_variant p.Pro100Thr
C/A,T 14145209 missense_variant p.Pro100His
C/T 14145220 missense_variant p.Pro104Ser
C/T 14145231 synonymous_variant p.Ser107Ser
A/G 14145255 synonymous_variant p.Thr115Thr
C/G 14145262 missense_variant p.Gln118Glu
G/A 14145267 synonymous_variant p.Gln119Gln
C/G 14145277 missense_variant p.Pro123Ala
C/A 14145348 missense_variant p.Phe146Leu
C/A 14145356 missense_variant p.Ser149Tyr
G/A 14145573 synonymous_variant p.Ser221Ser
G/A 14145733 missense_variant p.Ala237Thr
T/C 14145891 downstream_gene_variant
G/A 14145988 downstream_gene_variant
C/T,* 14146051 downstream_gene_variant
G/A 14146061 downstream_gene_variant
G/A 14146070 downstream_gene_variant
A/G 14146087 splice_region_variant&intron_variant
C/T 14146143 synonymous_variant p.His283His
G/A 14146189 missense_variant p.Glu299Lys
C/A 14146242 synonymous_variant p.Ile316Ile
T/A 14146277 3_prime_UTR_variant
C/A 14146281 3_prime_UTR_variant
C/T 14146323 3_prime_UTR_variant
T/G 14146372 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_34755.1
MPVELMMGYRNDSFAEENAVREAASGLESVEKLIRLLSHAQLQQQHQQLQQQSHATNSKSSMEIESDYGAVADVAVSKFKKVISLLGRTRTGHARFRRAPVPPPPPSEPRFYRATPLQQIPPPTEHPFIPKNGPIETKDSSKTINFSYSNSFVSSLTGDTDTKQPSSSSPAAATPFQITNLSQVSSAGKPPISSSSLKRKCSSDNLGSAKCGSSSSRCHCSKKSRKMRMKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGEHNHTLSAVEATTNLILESS*


CDS Sequence:
>Vu_34755.1
ATGCCTGTGGAGCTCATGATGGGTTATAGGAACGACAGTTTCGCCGAAGAGAATGCGGTTCGAGAAGCCGCGTCAGGGCTAGAGAGCGTGGAGAAGCTCATCAGGTTGCTGTCACACGCTCAGCTGCAACAACAACACCAACAACTTCAACAACAATCGCACGCGACCAATTCAAAGTCTTCCATGGAAATTGAATCCGATTACGGAGCTGTCGCTGACGTGGCGGTTTCCAAGTTCAAGAAGGTCATTTCGCTTCTGGGCCGAACCAGAACCGGTCACGCGCGTTTCAGAAGAGCCCCTGTGCCTCCTCCACCTCCTTCCGAACCCAGATTCTACCGCGCAACACCGCTGCAGCAGATCCCGCCGCCCACCGAACACCCTTTCATCCCAAAAAATGGTCCGATTGAGACAAAGGACTCTTCCAAGACCATCAACTTCTCTTATTCTAATTCCTTCGTCTCCTCCCTCACCGGCGACACCGACACCAAACAGCCCTCTTCCTCGTCGCCTGCGGCCGCAACGCCTTTTCAGATCACGAATCTCTCTCAGGTCTCCTCCGCCGGAAAGCCTCCTATTTCTTCGTCTTCGTTGAAGAGGAAGTGCAGCTCTGATAATTTGGGTTCTGCCAAGTGTGGCAGTTCCTCCAGCCGATGCCATTGCTCGAAGAAGAGTAGAAAAATGAGGATGAAGAGGGTGGTGAGGGTACCCGCAATAAGTTTGAAGATGGCTGATATTCCACCGGATGATTATTCTTGGAGGAAATACGGACAGAAACCGATTAAAGGATCTCCTCATCCAAGGGGCTATTACAAGTGCAGCAGTGTTAGAGGGTGTCCAGCGCGCAAGCACGTAGAGAGGGCTCTGGATGACCCTTCTATGTTGGTAGTAACCTACGAAGGTGAACACAATCACACACTCTCTGCAGTCGAAGCTACTACTAATCTTATCCTAGAATCGTCTTAG


Promoter Sequence:
>Vu_34755::LG10:14142846-14144846(+)
AAAGACCAAATTAAACATAAATTATGAAAATAGAAACCACATTTAATACTTGAAAAAAATTAGTATCTCATCGAACAAAGTCGACCAAAATAAGGACCAAAAGTGTTATTAAGTCTTTAGTTAATACACATGATATGAATTAGTGAAACATGATGGACAAAACAAAAGGAATAGTAAGATCTGATTCCCTTTAAACCTCAAAATTCTATTATGGTCAAAGTAGTGATTTGAACAAATTACATAGTATAAAATACATGTTAATATAAAACTTTTAATATTTTTTATAATTATTTTAAAACATAATTTTTAAGTTTAACTAGATTGCAAAAATTTTATGATATGATAAAATTTACACTCACTTATATTTATTTATATATATATATATATATATATATATATATATTAATTTCACTTTGTTATTAATATATGTAAGACTTTCAACGCATTCTCAAACATGAGGATATGTATATCTCGAGAATTAAACTATACACATTAATAGATAATTTGACAATAATTTAATAATGGATAAAACAATAAACTTAACAAACGAAAACTCTACAGTAATTTGTTCTAATTCATAATTATGATACCATATTAAGGAATAAACTTAAAATTTAACTTAGTATTACAAATATTACTTATAAAACAATATTTAAACTCACTTAGATATTTTAAATTAATTTAACCTATGGTTAATATAAACTTTCTTATTTGTACATAAGCATTAATAAGTTAGAAAGTAAAAGAAAAATCTATAATTCAAAAAAGAAAAAAAAAACTTTAACAAAATTTTAAGGATCAACTAAAAATGTCAAGATCTCTGTTAACATATATAGTTGTTGTTCTTTTAAATAATACTGCGAGTAAGATAATTATTAAAATAATCTTTTAAATATTAGAAAACACGTTAAATAGTTTTTGAGTTTTGAAAAATACTTAAAATCGTATACCGATGTTAATAAAATGTGCCAAAAATAGAAACTAAATTACAATATACATTGAATGTATTTATATATCTTGTTACCGTGGGTATTCTTCAAGAGAAAAATAATCTCAGGTATATTCAATCATACCAGTAATGGGCTGTGATTATTTAGAAATAAGACGTGCTTCGATGAATTTGTTACAAGAAGAGACAAATAAAATAAGTTTATTTACGTACAAATGGAAAATAAAAACTTAAAAAATTTTGCTGGATATATTTGATTTCAGTATAAAGTAATTATAGTGTATATCAACAAATTTAAAATTATTATAAAGTAATTCTAGTGTATATAAACAAAATTAAAAAACTACAGAGAAAACTGTTAAAAACTGACAAACACCGGTAGAAGAAAAAGACATTTAAAAAACGTAGAAGATAGAGGCGGAGAGAAAGCAGAGAGGGACAAAATGAGGGAAAAAATATTCAAAAGAAAAACAACAAAGACGACAAAAGAAAGCATTAAGAATCCAGAGAAAGGAAGGTCGTCAATCCAAGTCAACTACAACCTATGCTGGCAACCAACGGATCTCAAACTTTTCTCAAAGATCAGACGGCTAAAACAATGCCTTTGACCTGATTTTAAAGCCCCAATGTCGCTGAGATCAATGATAACCCACCGGTGGGACCCAGGGGCCAAAAAAGTCAATATCTCCCTGTCTCCCCACTACTCACTTCCTTCAGATGCTTTTTCCCATTGAAAAAAGAAAATTAAAAAAAAAAAGAAAAAAAAAGTATTTTCTTTTTTCTTTTCGGAGTCCGCAGAGACCAAAATACCCTGTTTCAGCGTTTGGATCTTACATACATGGATACATATTTTAGTACGTTAAACAGAGGCAAGTAAAGCAAAGCAATGTCACCCAAATTTTGACGGAAACAGGGACGAGACGAGTAGGGTTAGCTAGCTAGCGTGACAGTACAGTGACCTAGTGGACCAAACAGGCCACTATCGTTTTTTCTTTTAATTTATATTTTATATTTAATATTTAAATTTGGTTTTGGCATGACTTGACCAGGG


Gene Sequence:
>Vu_34755(+)
GTACCCTATGAGCCTCTTTTATTTTCTTTTGTCTTCCAAACCCTTTCTCTCTCTTTGATGCAACTATGCCTGTGGAGCTCATGATGGGTTATAGGAACGACAGTTTCGCCGAAGAGAATGCGGTTCGAGAAGCCGCGTCAGGGCTAGAGAGCGTGGAGAAGCTCATCAGGTTGCTGTCACACGCTCAGCTGCAACAACAACACCAACAACTTCAACAACAATCGCACGCGACCAATTCAAAGTCTTCCATGGAAATTGAATCCGATTACGGAGCTGTCGCTGACGTGGCGGTTTCCAAGTTCAAGAAGGTCATTTCGCTTCTGGGCCGAACCAGAACCGGTCACGCGCGTTTCAGAAGAGCCCCTGTGCCTCCTCCACCTCCTTCCGAACCCAGATTCTACCGCGCAACACCGCTGCAGCAGATCCCGCCGCCCACCGAACACCCTTTCATCCCAAAAAATGGTCCGATTGAGACAAAGGACTCTTCCAAGACCATCAACTTCTCTTATTCTAATTCCTTCGTCTCCTCCCTCACCGGCGACACCGACACCAAACAGCCCTCTTCCTCGTCGCCTGCGGCCGCAACGCCTTTTCAGATCACGAATCTCTCTCAGGTCTCCTCCGCCGGAAAGCCTCCTATTTCTTCGTCTTCGTTGAAGAGGAAGTGCAGCTCTGATAATTTGGGTTCTGCCAAGTGTGGCAGTTCCTCCAGCCGATGCCATTGCTCGAAGAAGAGGTAGATATATGTCACGCTCTGTCTTATTTTTATCCTAAAAAATCGTTTGAAAAAAGAAACTGTTTCCGTGATGTCTGGTTCTGATGCATTATTTTTTGGATTGGTGTGATGCAGTAGAAAAATGAGGATGAAGAGGGTGGTGAGGGTACCCGCAATAAGTTTGAAGATGGCTGATATTCCACCGGATGATTATTCTTGGAGGAAATACGGACAGAAACCGATTAAAGGATCTCCTCATCCAAGGTGCATAAAACAACATTACATCGTGTTCTGATTTAAATTATCCACCCCTTCAATTCCCACTTTAATTTGCTCTTTCACCATTCGATTTCAAATTTCAAAATGTACCCTTGTTCTGTTAAATTGATTTGTTTCCCTTTTTCTCTTTCCCGTGTGACTAAATTTAGAAAGATCTTATCATGGCTTGGTTTCTGTCATTTCCATCTTTTATTGTGGAGTTAATTTTGCACAGGTGAAGTGAGGTTTATGTTTGTCTTGAATTATTAATTGCAGGGGCTATTACAAGTGCAGCAGTGTTAGAGGGTGTCCAGCGCGCAAGCACGTAGAGAGGGCTCTGGATGACCCTTCTATGTTGGTAGTAACCTACGAAGGTGAACACAATCACACACTCTCTGCAGTCGAAGCTACTACTAATCTTATCCTAGAATCGTCTTAGCTGATTAATTAATCACCGATTTCCCATCACAGAGCATATTCTGATCATGCCATTCATGGCTTGTACACTTGAAAATTTTACTCTCGAAGGAGATTAATTAATTGATGGGTGGGTTTTCCTTCCATGTTCACATGTTCTGT