Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_34674 LG10 13255524 13256841 PREDICTED: homeobox-leucine zipper protein HAT22-like
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Annotations  
category   relationship type   keyword
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
G/A 13255551 missense_variant p.Pro281Leu
G/C 13255603 missense_variant p.Leu264Val
G/A 13255617 missense_variant p.Ala259Val
G/A 13255647 missense_variant p.Pro249Leu
T/C 13255788 missense_variant p.Gln202Arg
A/C 13255816 intron_variant
T/C 13255817 intron_variant
A/G 13255820 intron_variant
A/T 13255847 intron_variant
C/A 13255855 intron_variant
C/T 13255952 intron_variant
C/T 13255999 intron_variant
T/C 13256010 intron_variant
C/G 13256085 intron_variant
C/G 13256115 intron_variant
G/T 13256453 missense_variant p.Ser130Tyr
C/T 13256548 synonymous_variant p.Val98Val
A/G 13256581 synonymous_variant p.Leu87Leu
A/G 13256667 missense_variant p.Ser59Pro
G/A 13256740 synonymous_variant p.His34His
A/G 13256743 synonymous_variant p.His33His

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_34674.1
MGFDHDASTSGLHLVLGLSLTATTTPSTKPQDHHHHHHHHHFCVVKPSPTKPNSPNEPSLTLGLSGDSCHLAKQVPNNSKVYCEDPLDMSRQTSPHSVVSSFSTGRVVKRERDLSFEEVEAEAEAEERVSSRVSDEEEDGTNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLKKELQELKALKLAQPLYMPMPAATLTMCPSCERLGGVSDNASNKSPFSMAPKTHFYNPFANPSAAC*


CDS Sequence:
>Vu_34674.1
ATGGGTTTTGATCACGATGCCAGTACCTCTGGCCTTCACCTCGTTCTAGGGTTATCTTTGACTGCTACCACCACTCCATCTACCAAGCCTCAAGATCATCACCATCATCATCATCATCATCATTTTTGTGTTGTTAAGCCTTCGCCAACCAAGCCTAATTCCCCCAATGAACCATCTTTGACGTTGGGTTTGTCTGGCGATAGCTGCCACCTAGCCAAGCAAGTGCCCAACAACAGTAAGGTTTATTGTGAGGACCCTCTTGACATGTCTAGACAGACGTCACCTCACAGCGTGGTTTCGTCTTTCTCAACTGGGAGGGTTGTGAAGAGGGAGAGAGATCTTAGCTTTGAAGAGGTAGAGGCAGAGGCAGAGGCAGAAGAGAGGGTTTCTTCAAGAGTGAGCGACGAAGAAGAAGACGGCACCAATGCTAGGAAGAAACTCAGACTCACCAAAGAACAATCTGCACTACTGGAGGAGAGCTTCAAACAACACAGCACTCTCAATCCTAAACAGAAGCAAGCTTTAGCCAGACAGTTAAATCTACGGCCTCGACAAGTTGAAGTGTGGTTTCAGAATCGGAGAGCCAGAACAAAGCTGAAGCAGACAGAGGTGGACTGTGAGTTCTTGAAGAAATGCTGTGAAACGTTGACGGACGAAAACAGAAGGTTAAAGAAGGAGCTGCAGGAGCTGAAGGCACTGAAACTAGCTCAACCCTTGTACATGCCTATGCCTGCGGCAACACTCACCATGTGCCCTTCTTGCGAGAGGCTCGGTGGCGTTAGCGATAACGCTTCCAATAAAAGTCCTTTCTCCATGGCTCCCAAGACTCACTTCTACAACCCCTTTGCCAATCCTTCTGCAGCATGTTGA


Promoter Sequence:
>Vu_34674::LG10:13256841-13258841(-)
CGTGGGCTGCAGAGCTTTCTTTGTAAATTTTTATTTATAATATTACCCGACGTCATAAATACCTAGCCATGACGTAATAAACTAAATAGTAAGTTCGTCCAACTAAATTTCCGGTTCAGCCTATAACCTTTTAACATACAATTTCTTAATTGTATCCTAAAAAAGAAATGAAAGTAAAAAAACAGGCAGAGATTAGTATAATTTGTTGTTTGAAAATCGAAAGGTCGTGTTTTGCATTGAAATGAAAAATAAAATAAAAAAAAGGTGTTTGCCGCTTTTTGACCTTGTTGTGATCGAAGAGGAGATTGGAATTAGATTCAGGTACCGAAAAGCAGAACAACTTGCATTCTTATTTTCAAAATAATCATTTGGCTCGTTCACTTTTTGTGTAACCATATGATGATGCATCCAATTAAAGTTAAACCAAAGATGCGTGGGTTTATTCCCATCCAACATCCTGCTCAATTATAATTCATTATTTCTTGAATCCCTGTTGGTTTAAAAAAGGACACCTCCAATATAAAATCCAATTCCCAATTAATTAAGCTTAAAGATGATATTTTTGCCGAGAGAATTCTACTAGATTCAATGAGAACATTTTCATCATGATCAACAACACCTATTGTTAATGTCGTTAATTCATTTACACTTACCAAAAGGGTAGAAGAAAAGATTTGGTTGATGATGCGTGGCTGTAAAAGCTGGTGGTAATTACGGCGTTATTTCCTGGTGACTAATTATATTAGGTTTATCATTAATTACGGGTGACCTAACTTCTGCCGAGCGTCGCCGACAATGCATTATTGGAAGTGCTTATAGTACTAATACAGAAAAGTAGGTCCCAAACGCTTCACATCAACTTTCTAGTTAAGCAAAGATCCGGATTCTTGTTGATGAATCATATTCTGGCACCATTATAACTCTTTGAAACTCCATTTGTGTCTTATACCTACTTTTATCTCATTTTCTATTGGAAACAAACAAATAGTGCACATCCCTTTCTACTCTTCCACATTCATTATAAGCTAGAGGAAAAAGGCCCAACCATCGCCCCTCACATTCCTAATTCATTAAAAAGTATACAAGATTGGTAAGCAAAGTGACATGGTACCCATCTCTAACTAGTTCAACAAGGCATCAAGTGGGAGACAGTTCATGTGGGTCTCTTATACTTACATAAGTATATTATACACCTCTTTCCAATCATCTCTTTTTATTTTCCCTTCAAATTTTCCAATTAACTTGCAAGACAATCTTTGCATCACTGCCAATGCCACATACATATATGCTTCCACAATTCACCCAATTATTTTAATCCCTCTGTAACGTGGAAAATAAATTATCAAGAGGAAACAAATCAATAAACGTAGGAGAGAAAGAAATAAAAGGTGCCTGAGACACCAGTAAAGCAGGACTCAAGGGGGCCAATAATTGGTACAATGTGAAGTGAAAGAAACTACTAGTACACACACACACACACACACATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAGGTAAAGAAAGTGAGGTAACAGTAATGATAAAGGAATATATAGCTATATCTGGTACACTCGTTGGTGTGCACAGTAAGAGAGATTGCAGGAATTTAAGAGAGAGAGAGAGAGAGAGAGAGGGATTTTCCAAGTTTGTCTGTTATTATAATTATTTATAATTATAATGGAGCTAACAGTGTTGGGGTTCAAATGGTCAACCTATGCAAGAGATATACTACTCCAAGGGACTTTCATTATTTCCAATATCAAGATTCCTTTCTCTACTCATTCCTCCCTTTGATTAACAATAATCATAGCCACCCACCCACCCACCCAACGCCCCCACAAAACCTCACTCTCTCTCTTCTCTTCTCTTCTTCTTAAGACCCTTTCAATCCCACGACCCTTTAAACCACACAACATCTATAATTTTTCAACCCAAGAACCAGATACGTACCCACCCCCTTATTCTCTCAA


Gene Sequence:
>Vu_34674(-)
ATGGGTTTTGATCACGATGCCAGTACCTCTGGCCTTCACCTCGTTCTAGGGTTATCTTTGACTGCTACCACCACTCCATCTACCAAGCCTCAAGATCATCACCATCATCATCATCATCATCATTTTTGTGTTGTTAAGCCTTCGCCAACCAAGCCTAATTCCCCCAATGAACCATCTTTGACGTTGGGTTTGTCTGGCGATAGCTGCCACCTAGCCAAGCAAGTGCCCAACAACAGTAAGGTTTATTGTGAGGACCCTCTTGACATGTCTAGACAGACGTCACCTCACAGCGTGGTTTCGTCTTTCTCAACTGGGAGGGTTGTGAAGAGGGAGAGAGATCTTAGCTTTGAAGAGGTAGAGGCAGAGGCAGAGGCAGAAGAGAGGGTTTCTTCAAGAGTGAGCGACGAAGAAGAAGACGGCACCAATGCTAGGAAGAAACTCAGACTCACCAAAGAACAATCTGCACTACTGGAGGAGAGCTTCAAACAACACAGCACTCTCAATCCTGTAAATAATACTTATTATTATTAAATAATTAATCTCTCTCTTATTTTTTTTAGAGATAATTTGTTTGAAATTAATATTATTTTCTTGGATTGGATTTACAGAAACAGAAGCAAGCTTTAGCCAGACAGTTAAATCTACGGCCTCGACAAGTTGAAGTGTGGTTTCAGAATCGGAGAGCCAGGTACGTCTTCCTTTGATTTTAAAATCGACAGCTCCATAGCAAACAGCACTATAACAAATGTTTCATTAGGTTCTCCTTCATGTATATGTATATATATAAAGGTTTATATTTATAATCATCAAGCACAGATTAATAATATCGTTACGTGTGATATGAGATAAAGTTTCAGTTTTAAAAATGAAGCAATTTAATTAAATGATTGGTTCATTAAAACCTACAATCATTTGGTGGCCATGTTTTCCATGTCTAATTATTTAGTAAGGCTTAATTTCCTGGTTGAAAATATTGTTCATAAATTGGACAGATTCATGAGATGATAAGATGACATGTTGGTTTATTTGTTGCAGAACAAAGCTGAAGCAGACAGAGGTGGACTGTGAGTTCTTGAAGAAATGCTGTGAAACGTTGACGGACGAAAACAGAAGGTTAAAGAAGGAGCTGCAGGAGCTGAAGGCACTGAAACTAGCTCAACCCTTGTACATGCCTATGCCTGCGGCAACACTCACCATGTGCCCTTCTTGCGAGAGGCTCGGTGGCGTTAGCGATAACGCTTCCAATAAAAGTCCTTTCTCCATGGCTCCCAAGACTCACTTCTACAACCCCTTTGCCAATCCTTCTGCAGCATGTTGA